Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E23
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 1.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 4.9
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 4.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 6.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 6.5
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 259 HNNQQHHNSKEN 224
HN+Q HH+SK N
Sbjct: 446 HNDQAHHSSKSN 457
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -2
Query: 498 SRHASKHPPWTATCTHTHDSR-SSL*Y*RSAPDILMLGSIRVGIGPGVNSGRSFLNPATT 322
SRHA+ H C +T+ +S S+P +L G PG+ +FL+P +T
Sbjct: 1454 SRHATSHELKGLLCGNTYQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFLSPNST 1513
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -2
Query: 498 SRHASKHPPWTATCTHTHDSR-SSL*Y*RSAPDILMLGSIRVGIGPGVNSGRSFLNPATT 322
SRHA+ H C +T+ +S S+P +L G PG+ +FL+P +T
Sbjct: 1450 SRHATSHELKGLLCGNTYQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFLSPNST 1509
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 376 TGRPATVEDTSASLPLS 392
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 376 TGRPATVEDTSASLPLS 392
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 376 TGRPATVEDTSASLPLS 392
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 376 TGRPATVEDTSASLPLS 392
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 376 TGRPATVEDTSASLPLS 392
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 376 TGRPATVEDTSASLPLS 392
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 444 TGRPATVEDTSASLPLS 460
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 73 TGRPATIKSKS*GIPYS 23
TGRPAT++ S +P S
Sbjct: 444 TGRPATVEDTSASLPLS 460
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 503 CRLATPASTRLGRPLAPTPTTRDHRCNT 420
CR+ +T P PT + D CNT
Sbjct: 442 CRIHGSPATTAAPPQLPTEESVDALCNT 469
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 401 ISGALRQYYNDDLESWV 451
+ G RQ+YNDD ++
Sbjct: 221 LKGIARQFYNDDANVYI 237
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 426 TTMISSRGCGCKWPSKAG 479
T + S G CKW S+ G
Sbjct: 21 TILSESAGTSCKWLSEGG 38
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 506 GCRLATPASTRLGRPLAPTPTTRDHRC 426
GC + P S G LA R ++C
Sbjct: 98 GCTIIEPTSGNTGIGLAMAAAVRGYKC 124
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,636
Number of Sequences: 438
Number of extensions: 5120
Number of successful extensions: 25
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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