Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E21
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 170 1e-42
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 170 1e-42
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 125 4e-29
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 124 9e-29
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 121 6e-28
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 103 1e-22
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 89 4e-18
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 82 5e-16
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 82 6e-16
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 73 4e-13
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 69 6e-12
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 65 6e-11
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 33 0.27
Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical pr... 29 3.4
Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA hai... 29 3.4
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 29 3.4
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 29 3.4
AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone stem-... 29 3.4
Z81107-8|CAB03231.3| 282|Caenorhabditis elegans Hypothetical pr... 29 4.4
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 29 5.9
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 29 5.9
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 170 bits (414), Expect = 1e-42
Identities = 74/135 (54%), Positives = 95/135 (70%)
Frame = +3
Query: 147 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGT 326
N+G + P IGLGTW+SKPGEV A+K A+ GYRH+DCAH+Y N+KEVG+AL+ +EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 327 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDS 506
+KRE++FITSK+W TFH E I L +L L Y+DL LIHWPQ + EG +LFP
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 507 EDKFIPSAVDYVDTW 551
K S VDY++TW
Sbjct: 128 NGKMRYSDVDYLETW 142
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 556 ALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPA 663
A EA + G RSIGLSNF QI+RV + A++KPA
Sbjct: 144 AFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPA 179
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 170 bits (414), Expect = 1e-42
Identities = 74/135 (54%), Positives = 95/135 (70%)
Frame = +3
Query: 147 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGT 326
N+G + P IGLGTW+SKPGEV A+K A+ GYRH+DCAH+Y N+KEVG+AL+ +EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 327 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDS 506
+KRE++FITSK+W TFH E I L +L L Y+DL LIHWPQ + EG +LFP
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 507 EDKFIPSAVDYVDTW 551
K S VDY++TW
Sbjct: 128 NGKMRYSDVDYLETW 142
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 556 ALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPA 663
A EA + G RSIGLSNF QI+RV + A++KPA
Sbjct: 144 AFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPA 179
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 125 bits (302), Expect = 4e-29
Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Frame = +3
Query: 120 MAAPVPVI-FNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGD 296
M++ VP+ +NG P IGLGTW+ E +++A+ GYRH+D A +Y NE ++GD
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGD 60
Query: 297 ALRAKFEEGTIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFK 476
AL F EG +KREDIFIT+K +C PD+VEEA++ SLK L L+Y+DLYL H P + K
Sbjct: 61 ALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTK 120
Query: 477 EGDDLFPKD 503
+ D F D
Sbjct: 121 D-DGSFRSD 128
Score = 35.1 bits (77), Expect = 0.068
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 580 GLTRSIGLSNFNRRQIERVLEVAKI 654
GLT++IG+SNFN QI R++ + K+
Sbjct: 145 GLTKAIGVSNFNESQIVRIMNIQKV 169
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 124 bits (299), Expect = 9e-29
Identities = 57/119 (47%), Positives = 77/119 (64%)
Frame = +3
Query: 123 AAPVPVIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDAL 302
+A + +NG PVIGLGTW+S P EV AVK A+ GYR +D A +Y NE+ +G A+
Sbjct: 3 SATASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAI 62
Query: 303 RAKFEEGTIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKE 479
+ EEG +KRE++FIT+K W P +E ++ SLK L LEY+DLYL H P AF +
Sbjct: 63 KELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFND 121
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 121 bits (292), Expect = 6e-28
Identities = 60/137 (43%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
Frame = +3
Query: 147 NNGRTCPVIGLGTWKSKP-GEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEG 323
N G P+ GLGTW+ K E+T A++ A+D GYR +D AH+Y NE +G L G
Sbjct: 9 NTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSG 68
Query: 324 TIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLF-PK 500
+KREDIF+TSKL T H P+ V + +++ LK L LEY+DLYLIH P FK + F P
Sbjct: 69 KLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPL 128
Query: 501 DSEDKFIPSAVDYVDTW 551
+ + + ++DTW
Sbjct: 129 MENGELAVTEIAHIDTW 145
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +1
Query: 556 ALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPA 663
ALE L ++G +++G+SNF+ Q++ + + A++KPA
Sbjct: 147 ALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPA 182
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 103 bits (248), Expect = 1e-22
Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Frame = +3
Query: 138 VIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFE 317
V N+G PVIG GTW+ + V+DA++ GYRH+D A + N++EV ++ +
Sbjct: 7 VTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCK 66
Query: 318 EGTIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGD---- 485
++RE++F++SK+W T+H + + I L+ Y+DL +IHWP + E +
Sbjct: 67 IRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPGE 126
Query: 486 -DLFPKDSEDKFIPSAVDYVDTW 551
L+P+ + K S VDY++TW
Sbjct: 127 RGLWPRGANGKMRYSDVDYLETW 149
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 556 ALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAV 666
ALE G RSIGL+NFN Q+E+V IKPAV
Sbjct: 151 ALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAV 187
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/113 (43%), Positives = 70/113 (61%)
Frame = +3
Query: 147 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGT 326
N G CP+IGLGT+K +V + A+ GYR D A +Y NEKE+GDAL +
Sbjct: 6 NTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHN 65
Query: 327 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGD 485
+KREDIFIT+K+ + + V++ + SL L Y+D+YLIH+P++F GD
Sbjct: 66 LKREDIFITTKMHP--NTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGD 116
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 89.0 bits (211), Expect = 4e-18
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +3
Query: 165 PVIGLGTWKSKPGEVTQAVKDA-IDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 341
P+IG+GTW+ + E+ + V DA GYR +D A +Y NE ++G L +KRED
Sbjct: 12 PLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRED 71
Query: 342 IFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWP 464
I+ITSKL + E+I+ SL NL +EYLDL LIHWP
Sbjct: 72 IWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP 112
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 82.2 bits (194), Expect = 5e-16
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = +3
Query: 150 NGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI 329
NG+ P + LGT+++K ++ AV +A+ +GYR D A Y NEK++G AL+ I
Sbjct: 6 NGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNI 65
Query: 330 KREDIFITSKL--WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKD 503
EDI++TSK+ + + + +L+ + + SL+ L +YLDL L+H+P+ P D
Sbjct: 66 CSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPR---------PLD 116
Query: 504 SEDKFIPSAVDYVDTW 551
+ED + + DTW
Sbjct: 117 TEDLNENNKMYRKDTW 132
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 556 ALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAV 666
ALE L +G RSIG+SN+ IE + I+P V
Sbjct: 134 ALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQV 170
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 81.8 bits (193), Expect = 6e-16
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Frame = +3
Query: 147 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGT 326
N+G P +G GT+K V A+ A+ GYR D A YLNEKE+G+AL+ +
Sbjct: 16 NSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHG 75
Query: 327 IKREDIFITSKLWC-TFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDD 488
+ R D+F+TSK + + + + ++ SL++L +Y+D+YL+H+P+ +D
Sbjct: 76 LSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDND 130
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = +3
Query: 147 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGT 326
+N + P +GLGTW+S +V AVK A+ GY +D A Y NE+ +G A++ EG
Sbjct: 51 SNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGV 110
Query: 327 IKREDIFITSKL 362
+KRED+FIT+K+
Sbjct: 111 VKREDLFITTKV 122
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 68.5 bits (160), Expect = 6e-12
Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Frame = +3
Query: 144 FNNGRTCPVIGLGTWKSKPGE-VTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEE 320
F++G P IGLG + + + + +++ A+ GYR D A++Y NE +G++L+ +
Sbjct: 14 FSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQ 73
Query: 321 GTIKREDIFITSKL-WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDD 488
+ RED+FIT+K+ + + E+ + SL L +Y+DL LIH+P+ G+D
Sbjct: 74 FGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGND 130
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 559 LEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAV 666
LE E G RSIG+SN+ + + E AKI+P +
Sbjct: 147 LEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVL 182
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 65.3 bits (152), Expect = 6e-11
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +3
Query: 129 PVPVIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAID-IGYRHVDCAHIYLNEKEVGDALR 305
P V+ NN P+IGLGT S G AV +I GYR +D A Y EK++G A++
Sbjct: 3 PTTVLSNNVEM-PLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVK 60
Query: 306 AKFEEGTIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQ 467
++ RE++F+++KLW D V A +TS + L +YLD+Y+IH PQ
Sbjct: 61 ----NCSVPREEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQ 109
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 559 LEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKP 660
+E L E RSIG+SN++ ++ +LE A I P
Sbjct: 128 MELLYEDEHVRSIGVSNYSIEDLDELLEFASILP 161
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +3
Query: 363 WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPK 500
W P +E A++ SLK L LEY+DLYL H P AF DD+ K
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAF--SDDMSQK 96
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 559 LEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVPXXR 678
+E LVE SIG+S+F+ RQ++ +++ +KP++ R
Sbjct: 149 MEKLVETSEIASIGVSDFSARQLKTIIDHFDVKPSINHVR 188
>Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical
protein R06F6.1 protein.
Length = 367
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 496 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 383
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA
hairpin-binding protein protein.
Length = 367
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 496 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 383
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 76 ASSTEHRAASIKHQAWPRQSPSYSTTDAR-VPSSD*ELGSLSRER*LKQSKTRST 237
ASS + + K Q + +QS +T + PS+D E+G L +ER L+ + T
Sbjct: 328 ASSMDSNNLTRKRQLFKKQSSLVNTFRRKGSPSTDVEMGELQQERLLRHERNSDT 382
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 76 ASSTEHRAASIKHQAWPRQSPSYSTTDAR-VPSSD*ELGSLSRER*LKQSKTRST 237
ASS + + K Q + +QS +T + PS+D E+G L +ER L+ + T
Sbjct: 369 ASSMDSNNLTRKRQLFKKQSSLVNTFRRKGSPSTDVEMGELQQERLLRHERNSDT 423
>AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone
stem-loop binding proteinCDL-1 protein.
Length = 367
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 496 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 383
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>Z81107-8|CAB03231.3| 282|Caenorhabditis elegans Hypothetical
protein R07H5.9 protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 196 SRER*LKQSKTRSTSATGTWTAPTSTSMRRRWGTP*EPSLKKEQSKERISS 348
SR + + S++RS+S T + +APTST+ T + S KK K R SS
Sbjct: 132 SRSQQCEVSESRSSSVTASSSAPTSTTCYDSEPTKSDTS-KKSSKKSRKSS 181
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 244 TGTWTAPTSTSMRRRWGTP*EPSLKKEQSKERISS 348
T W P +T+ RW E ++K Q E ISS
Sbjct: 523 TAKWETPDTTNCTHRWVAEMETAIKDNQPVEDISS 557
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 244 TGTWTAPTSTSMRRRWGTP*EPSLKKEQSKERISS 348
T W P +T+ RW E ++K Q E ISS
Sbjct: 523 TAKWETPDTTNCTHRWVAEMETAIKDNQPVEDISS 557
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,749,412
Number of Sequences: 27780
Number of extensions: 325346
Number of successful extensions: 961
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -