Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E17
(886 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 53 3e-09
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 53 3e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 6.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.5
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 8.6
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 8.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 8.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 8.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 8.6
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +3
Query: 492 AELFAAGAFSGIFTTSIMAPGERIKCLLQIQQGG---NVPQKYNGMVDCARQLYAEGGMR 662
A+ F AG + + + +AP ER+K LLQ+Q + Q+Y GM+DC ++ E G
Sbjct: 11 AKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFL 70
Query: 663 SIYKGSVATVLRDAPASGMYF 725
S ++G++A V+R P + F
Sbjct: 71 SYWRGNLANVIRYFPTQALNF 91
Score = 51.6 bits (118), Expect = 9e-09
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 4/186 (2%)
Frame = +3
Query: 210 GGFGGVCTVLSGHPMDTIKVRLQTMPLPKPGEVALYAGTWDCFKKTVQKEGFRGLYKGMS 389
GG G ++ +P+D + RL + K G + G +C K + +G GLY+G
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAA-DVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 390 APLTGVAPIFAISFFGFGLGKKLIKNDEEQVLTKAELFAAGAFSGIFTTS---IMAPGER 560
+ G+ I+ ++FGF + + D + K + + + TT + P +
Sbjct: 181 VSVQGII-IYRAAYFGFYDTARGMLPDPK----KTPFLISWGIAQVVTTVAGIVSYPFDT 235
Query: 561 IKCLLQIQQGGNVPQ-KYNGMVDCARQLYAEGGMRSIYKGSVATVLRDAPASGMYFMTYE 737
++ + +Q G + Y + C +Y G + +KG+ + +LR + + Y+
Sbjct: 236 VRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR-GTGGALVLVLYD 294
Query: 738 WLKERL 755
+K L
Sbjct: 295 EIKNLL 300
Score = 48.4 bits (110), Expect = 9e-08
Identities = 42/198 (21%), Positives = 84/198 (42%), Gaps = 9/198 (4%)
Frame = +3
Query: 171 MSEKSSPIKY---FLCGGFGGVCTVLSGHPMDTIKVRLQTMPLPKP-GEVALYAGTWDCF 338
MS + P+ + FL GG + + P++ +K+ LQ + K E Y G DCF
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 339 KKTVQKEGFRGLYKGMSAPLTGVAPIFAISFFGFGLGKKLIKNDEEQVLTKAELF----A 506
+ +++GF ++G A + P A++F K++ ++ F A
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 507 AGAFSGIFTTSIMAPGERIKCLLQIQQG-GNVPQKYNGMVDCARQLYAEGGMRSIYKGSV 683
+G +G + + P + + L G +++ G+ +C +++ G+ +Y+G
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 684 ATVLRDAPASGMYFMTYE 737
+V YF Y+
Sbjct: 181 VSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +3
Query: 492 AELFAAGAFSGIFTTSIMAPGERIKCLLQIQQGG---NVPQKYNGMVDCARQLYAEGGMR 662
A+ F AG + + + +AP ER+K LLQ+Q + Q+Y GM+DC ++ E G
Sbjct: 11 AKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFL 70
Query: 663 SIYKGSVATVLRDAPASGMYF 725
S ++G++A V+R P + F
Sbjct: 71 SYWRGNLANVIRYFPTQALNF 91
Score = 51.6 bits (118), Expect = 9e-09
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 4/186 (2%)
Frame = +3
Query: 210 GGFGGVCTVLSGHPMDTIKVRLQTMPLPKPGEVALYAGTWDCFKKTVQKEGFRGLYKGMS 389
GG G ++ +P+D + RL + K G + G +C K + +G GLY+G
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAA-DVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 390 APLTGVAPIFAISFFGFGLGKKLIKNDEEQVLTKAELFAAGAFSGIFTTS---IMAPGER 560
+ G+ I+ ++FGF + + D + K + + + TT + P +
Sbjct: 181 VSVQGII-IYRAAYFGFYDTARGMLPDPK----KTPFLISWGIAQVVTTVAGIVSYPFDT 235
Query: 561 IKCLLQIQQGGNVPQ-KYNGMVDCARQLYAEGGMRSIYKGSVATVLRDAPASGMYFMTYE 737
++ + +Q G + Y + C +Y G + +KG+ + +LR + + Y+
Sbjct: 236 VRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR-GTGGALVLVLYD 294
Query: 738 WLKERL 755
+K L
Sbjct: 295 EIKNLL 300
Score = 48.4 bits (110), Expect = 9e-08
Identities = 42/198 (21%), Positives = 84/198 (42%), Gaps = 9/198 (4%)
Frame = +3
Query: 171 MSEKSSPIKY---FLCGGFGGVCTVLSGHPMDTIKVRLQTMPLPKP-GEVALYAGTWDCF 338
MS + P+ + FL GG + + P++ +K+ LQ + K E Y G DCF
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 339 KKTVQKEGFRGLYKGMSAPLTGVAPIFAISFFGFGLGKKLIKNDEEQVLTKAELF----A 506
+ +++GF ++G A + P A++F K++ ++ F A
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 507 AGAFSGIFTTSIMAPGERIKCLLQIQQG-GNVPQKYNGMVDCARQLYAEGGMRSIYKGSV 683
+G +G + + P + + L G +++ G+ +C +++ G+ +Y+G
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 684 ATVLRDAPASGMYFMTYE 737
+V YF Y+
Sbjct: 181 VSVQGIIIYRAAYFGFYD 198
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 551 GRHYGRRKYTRECSGGE 501
G H+G+R R C+G E
Sbjct: 381 GSHHGQRVMVRTCNGLE 397
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 6.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 735 EWLKERLMPEDASAKLKLLVPPWLEAVQV 821
E+L E M + + K PPWLE V V
Sbjct: 979 EYLLEDSMKQQYGKRRK--EPPWLEGVHV 1005
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 563 DTFSGRHYGRRKYTRECSGGEKFCFR 486
+ F G Y R K R C E+F ++
Sbjct: 479 ENFKGGMYLRLKARRACMNYERFTYK 504
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 563 DTFSGRHYGRRKYTRECSGGEKFCFR 486
+ F G Y R K R C E+F ++
Sbjct: 479 ENFKGGMYLRLKARRACMNYERFTYK 504
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 8.6
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 663 SIYKGSVATVLRDAPASGMYFMTY--EWLKERLMPEDASAKLKLL 791
+++ S+AT+ D +T+ +WL ERL D +LK L
Sbjct: 64 NLFVRSIATI-SDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 441 GLGKKLIKNDEEQVLTKAELFAAGAF 518
G+ + ++ND+E AEL G F
Sbjct: 366 GMYQCFVRNDQESAQATAELKLGGRF 391
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -1
Query: 103 NNKFLSGLVNSCLSLVCELKNLKEFPI 23
NN + + N+C L + N+++ P+
Sbjct: 340 NNNYNNNYNNNCKKLYYNIINIEQIPV 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,560
Number of Sequences: 438
Number of extensions: 6099
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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