Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E15
(1085 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 6e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.053
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.16
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.28
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.37
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.6
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 27 6.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 6.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.0
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -1
Query: 623 APXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSP 483
AP PPPP PP PPPPPP P + P P P
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPP 495
PP P P TP P P P PPPPPP PG P PPP
Sbjct: 732 PPPPPPAVIVP-TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.12
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 9/53 (16%)
Frame = -1
Query: 614 TPXPPPPX---PPRXXXPXXXPPP------PPPXPGXRXXVXXWPXPPPXGSP 483
+P PPPP P P PPP PPP P P PPP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = -2
Query: 748 SPPXGXXXXPXXXXPPXXGXXPXXXPXXGXXXXPPGPX--AXXXPPXPXPPPPPXRPG 581
SPP P P P G PP P A PP P PPPP G
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 674 PXXGXXXXPPRPXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXP 537
P G PP P G A P PPPP P P P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 30.3 bits (65), Expect = 0.49
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 754 KXSPPXGXXXXPXXXXPPXXGXXPXXXPXXGXXXXPPGPXAXXXPPXPXPPPPP 593
K PP P P G PP P P P PPPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.49
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 602 PPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSPXKAG 471
PPP PP P P P P P P PPP G AG
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG-VAGAG 774
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 6e-04
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Frame = -1
Query: 707 PPXXGXXXXXXPXXGXXXXPPRPXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPP---XP 537
PP P PP P AP P P PP PP PPP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 536 GXRXXVXXWPXPPPXGSP 483
+ V P PPP +P
Sbjct: 1200 VPKPSVGVPPVPPPSTAP 1217
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPXP----PPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSP 483
PP P P P P P P P P P PP P + V P P P G+P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP--KPSVAAPPVPAPSGAP 1159
Score = 31.1 bits (67), Expect = 0.28
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 647 PRPXGXXXAPX--TPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSP 483
P P G P PP P P P P PP P + V P P P G+P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP--KPSVAAPPVPVPSGAP 1140
Score = 30.7 bits (66), Expect = 0.37
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPXPP--PPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSP 483
PP P P P P PP P P P P + V P P P G+P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 30.7 bits (66), Expect = 0.37
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = -1
Query: 707 PPXXGXXXXXXPXXGXXXXPPRPXGXXXAPXTPXPP--PPXPPRXXXPXXXPPPP---PP 543
PP P PP P AP P P PP P P P PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 542 XPGXRXXVXXWPXPPPXGSP 483
P V P PPP +P
Sbjct: 1181 VPKPAAGVP--PVPPPSEAP 1198
Score = 30.3 bits (65), Expect = 0.49
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPXP---PPPXP-PRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGS 486
PP P AP P P PP P P P P PP P P P P S
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Score = 30.3 bits (65), Expect = 0.49
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Frame = -1
Query: 707 PPXXGXXXXXXPXXGXXXXPPRPXGXXXAPXTP----XPPPPXPPRXXXPXXXPPPPPPX 540
PP P PP P AP P PP P P P P PP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 539 PGXRXXVXXWPXPPP 495
P + V P P P
Sbjct: 1162 P--KPSVAAPPVPAP 1174
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 4/63 (6%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPXP----PPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSP 483
PP P P P P P P P P P PP P + P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 482 XKA 474
A
Sbjct: 1239 VPA 1241
Score = 28.3 bits (60), Expect = 2.0
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 11/67 (16%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPXPP--PPXP-PRXXXPXXX-----PPPPPPXPGXRXXVXXWPXP-- 501
PP P AP P P PP P P P P PPP P + P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 500 -PPXGSP 483
PP +P
Sbjct: 1082 APPVPAP 1088
Score = 27.1 bits (57), Expect = 4.6
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = -1
Query: 749 VPPXGXXXXXXXXXPPXXGXXXXXXPXXGXXXXPPRPXGXXXAPXTPXPPPPXPPRXXXP 570
+PP PP P G PP AP P P PP
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP----PSTAPPVPTPSAGLPPVPVPT 1233
Query: 569 XXXPPPPPP 543
PP P P
Sbjct: 1234 AKAPPVPAP 1242
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -1
Query: 620 PXTPXPPPPXPPRXXXPXXXPPPPPP 543
P P PPPP PP P PPPPPP
Sbjct: 6 PGNPPPPPP-PPGFEPPSQPPPPPPP 30
Score = 33.9 bits (74), Expect = 0.040
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 572 PXXXPPPPPPXPGXRXXVXXWPXPPP 495
P PPPPPP PG P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = -1
Query: 605 PPPPXPPRXXXPXXXP---PPPPPXPG 534
PPPP PP P P PPPPP PG
Sbjct: 9 PPPPPPP----PGFEPPSQPPPPPPPG 31
Score = 29.5 bits (63), Expect = 0.86
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 664 GXXXXPPGPXAXXXPPXPXPPPPP 593
G PP P P P PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.053
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Frame = -1
Query: 605 PPPPXPPRXXXPXXXPPPP-----PPXPGXRXXVXXWPXPPPXGS 486
PPPP PPR P PP PP P R PPP S
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
Score = 32.7 bits (71), Expect = 0.092
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = -1
Query: 746 PPXGXXXXXXXXXPPXXGXXXXXXPXXGXXXXPPRPXGXXXAPXTPXPPPPXPPRXXXPX 567
PP PP G PP P AP P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 566 XXPPPPPPXP 537
PP P P P
Sbjct: 475 APPPAPAPAP 484
Score = 30.3 bits (65), Expect = 0.49
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 611 PXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSPXKAG 471
P P PP P P P PP P P P P AG
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Score = 29.9 bits (64), Expect = 0.65
Identities = 25/92 (27%), Positives = 28/92 (30%)
Frame = -1
Query: 674 PXXGXXXXPPRPXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPP 495
P G PP P AP T PPP P PPP PG P PP
Sbjct: 354 PPQGRSAPPPPPP--RSAPSTGRQPPPLSSSRAV-SNPPAPPPAIPGRSA-----PALPP 405
Query: 494 XGSPXKAGRXXXSSXXSXXVXEXXXHPPXQXP 399
G+ + + S PP P
Sbjct: 406 LGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 29.9 bits (64), Expect = 0.65
Identities = 26/93 (27%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Frame = -1
Query: 749 VPPXGXXXXXXXXXPPXXGXXXXXXPXXGXXXXPPR-PXGXXXAPXTPXPPPPXPPRXXX 573
+PP G P P PP P G AP P P PP
Sbjct: 403 LPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP---L 459
Query: 572 PXXXPPPPPPXPGXRXXVXXWPXPPPXGSPXKA 474
P P PP P P PPP +P A
Sbjct: 460 PAGMPAAPPLPPAA-------PAPPPAPAPAPA 485
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = -1
Query: 641 PXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPP 495
P P P P PP P PPP P V P PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 29.5 bits (63), Expect = 0.86
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPX---PPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPP 495
PPR P P PPP PPR PPP V P PPP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL---SSSRAVSNPPAPPP 393
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 602 PPPXPPRXXXPXXXPPPPPPXP 537
PPP PP PP PP P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRP 274
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 620 PXTPXPPPPXPPRXXXPXXXPPPPPP 543
P + PPP PP P PPPP P
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.65
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 623 APXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSP 483
AP P PP P+ P P PP P P P G P
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = -1
Query: 614 TPXPPP---PXPPRXXXPXXXPP--PPPPXP 537
TP PPP P PP PP PPPP P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 650 PPRPXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXP 537
P RP P P PP PP P PP P P
Sbjct: 1691 PVRPQSAAP-PQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = -1
Query: 620 PXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPP 498
P + PP P P PPPP P P PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.28
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 614 TPXPPPPXPPRXXXPXXXPPPPPP 543
+P PP P+ P PPPPPP
Sbjct: 220 SPEIPPTYTPKQADPLPAPPPPPP 243
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 641 PXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXP 537
P P + PP P P PPPPP P
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 24.6 bits (51), Expect(2) = 0.91
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 619 PXPXPPPPPXRP 584
P P PPPPP P
Sbjct: 236 PAPPPPPPPTLP 247
Score = 23.0 bits (47), Expect(2) = 0.91
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 622 PPXPXPPPP 596
PP P PPPP
Sbjct: 189 PPPPPPPPP 197
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.37
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = -1
Query: 623 APXTPX----PPPPXPPRXXXPXXXPPPPPPXPGXRXXV-XXWPXPPPXGSPXKA 474
AP TP PP PPR P P PP P + P P +P K+
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = -1
Query: 707 PPXXGXXXXXXPXXGXXXXPPRPXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXPGXR 528
PP P PP P AP P PP P + P PP P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSK---APPIPSSLPP-PAQPAAPVKSPPSAPSLPSAV 194
Query: 527 XXVXXWPXPPP 495
+ PPP
Sbjct: 195 PPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Frame = -1
Query: 605 PPPPXPPRXXXPXXXPPP----PPPXPGXRXXVXXWPXPPPXGSPXKA 474
P PP P P PP PPP P + P P P A
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 605 PPPPXPPRXXXPXXXPPPPPPXPGXR 528
P PP PP P P PP G R
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPLMTGDR 28
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 582 PGRXGGG-GGXGXGGXXXAXGPGGXXXXP 665
PG GGG GG G G GPGG P
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 582 PGRXGGG-GGXGXGGXXXAXGPGG 650
PG GGG GG G G GPGG
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGG 267
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 605 PPPPXPPRXXXPXXXPPPPPPXP 537
P P P PPPPPP P
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPPP 1102
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 602 PPPXPPRXXXPXXXPPPPPP 543
PPP R P PPPP P
Sbjct: 11 PPPNDSRSSTPATGPPPPIP 30
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = -1
Query: 620 PXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPPXGSPXKA 474
P PPPP P+ P P V P PPP +P A
Sbjct: 361 PQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAV---PVPPPAPAPAAA 406
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 8.0
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = -1
Query: 644 RPXGXXXAPXTPXPPPPXPPRXXXPXXXPPPPPPXPGXRXXVXXWPXPPP 495
+P P P P P P P P PP P P PP
Sbjct: 91 KPLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 571 GXXXRGGXGGGGXGVXGAXXXPXGRGG 651
G RGG GGG G G RGG
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,748,589
Number of Sequences: 5004
Number of extensions: 24112
Number of successful extensions: 497
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 571756234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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