Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_E13
         (947 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M96684-1|AAA60229.1|  322|Homo sapiens Pur protein.                    33   1.1  
BT019388-1|AAV38195.1|  322|Homo sapiens purine-rich element bin...    33   1.1  
BC036087-1|AAH36087.1|  322|Homo sapiens purine-rich element bin...    33   1.1  
U10063-1|AAA57161.1|  423|Homo sapiens POU domain factor protein.      32   3.5  
L20433-1|AAA65605.1|  420|Homo sapiens octamer binding transcrip...    32   3.5  
AL445209-3|CAI15184.1|  419|Homo sapiens POU domain, class 4, tr...    32   3.5  
X64624-1|CAA45907.1|  331|Homo sapiens RDC-1 protein.                  31   4.6  

>M96684-1|AAA60229.1|  322|Homo sapiens Pur protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -2

Query: 781 GXXGGXGXPXXGQGGXXGXGXGGASXGEXPGXPXXPXGFXH 659
           G  G  G P  G G   G G GG   G   G    P G  H
Sbjct: 16  GSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQH 56


>BT019388-1|AAV38195.1|  322|Homo sapiens purine-rich element
           binding protein A protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -2

Query: 781 GXXGGXGXPXXGQGGXXGXGXGGASXGEXPGXPXXPXGFXH 659
           G  G  G P  G G   G G GG   G   G    P G  H
Sbjct: 16  GSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQH 56


>BC036087-1|AAH36087.1|  322|Homo sapiens purine-rich element
           binding protein A protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -2

Query: 781 GXXGGXGXPXXGQGGXXGXGXGGASXGEXPGXPXXPXGFXH 659
           G  G  G P  G G   G G GG   G   G    P G  H
Sbjct: 16  GSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQH 56


>U10063-1|AAA57161.1|  423|Homo sapiens POU domain factor protein.
          Length = 423

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = -2

Query: 799 GPXXXXGXXGGXGXPXXGQGGXXGXGXGGASXGEXPG 689
           GP    G  GG G    G GG  G G GG   G   G
Sbjct: 149 GPGGGGGPGGGGGPGGGGPGGGGGGGPGGGGGGPGGG 185



 Score = 31.1 bits (67), Expect = 6.1
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = -2

Query: 805 GRGPXXXXGXXGGXGXPXXGQGGXXGXGXGGASXGEXPG 689
           G G     G   G G    G GG  G G GG   G  PG
Sbjct: 130 GAGGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGGPG 168


>L20433-1|AAA65605.1|  420|Homo sapiens octamer binding
           transcription factor 1 protein.
          Length = 420

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = -2

Query: 799 GPXXXXGXXGGXGXPXXGQGGXXGXGXGGASXGEXPG 689
           GP    G  GG G    G GG  G G GG   G   G
Sbjct: 146 GPGGGGGPGGGGGPGGGGPGGGGGGGPGGGGGGPGGG 182


>AL445209-3|CAI15184.1|  419|Homo sapiens POU domain, class 4,
           transcription factor 1 protein.
          Length = 419

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -2

Query: 781 GXXGGXGXPXXGQGGXXGXGXGGASXGEXPG 689
           G  GG G P  G GG  G G GG   G   G
Sbjct: 151 GGPGGGGGPGGGPGGGGGGGPGGGGGGPGGG 181


>X64624-1|CAA45907.1|  331|Homo sapiens RDC-1 protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 18/47 (38%), Positives = 18/47 (38%)
 Frame = -2

Query: 808 RGRGPXXXXGXXGGXGXPXXGQGGXXGXGXGGASXGEXPGXPXXPXG 668
           RG G        GG G P  G GG  G G GG   G   G    P G
Sbjct: 50  RGAGGGGAHDAAGGGG-PRGGGGGPGGGGPGGGGGGAAGGGGGGPGG 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,523,445
Number of Sequences: 237096
Number of extensions: 966969
Number of successful extensions: 3395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3223
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)