Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E10
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019303-1|AAH19303.1| 75|Homo sapiens chromosome 3 open readi... 124 6e-28
BC007929-1|AAH07929.1| 75|Homo sapiens chromosome 3 open readi... 124 6e-28
BC001067-1|AAH01067.1| 75|Homo sapiens chromosome 3 open readi... 124 6e-28
AY148220-1|AAN60162.1| 75|Homo sapiens Brk1-like protein protein. 124 6e-28
AY148219-1|AAN60161.1| 75|Homo sapiens Brk1-like protein protein. 124 6e-28
V00549-1|CAA23810.1| 188|Homo sapiens protein ( Messenger RNA f... 30 9.5
V00544-1|CAA23805.1| 188|Homo sapiens protein ( Messenger RNA f... 30 9.5
M54886-1|AAA59181.1| 188|Homo sapiens interferon protein. 30 9.5
>BC019303-1|AAH19303.1| 75|Homo sapiens chromosome 3 open reading
frame 10 protein.
Length = 75
Score = 124 bits (298), Expect = 6e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = +2
Query: 203 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 382
+ +Q++I QDWANREYIE+IT SIKKI DFLNSFDMSCRSRLATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 383 ACVTKGETLT 412
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>BC007929-1|AAH07929.1| 75|Homo sapiens chromosome 3 open reading
frame 10 protein.
Length = 75
Score = 124 bits (298), Expect = 6e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = +2
Query: 203 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 382
+ +Q++I QDWANREYIE+IT SIKKI DFLNSFDMSCRSRLATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 383 ACVTKGETLT 412
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>BC001067-1|AAH01067.1| 75|Homo sapiens chromosome 3 open reading
frame 10 protein.
Length = 75
Score = 124 bits (298), Expect = 6e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = +2
Query: 203 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 382
+ +Q++I QDWANREYIE+IT SIKKI DFLNSFDMSCRSRLATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 383 ACVTKGETLT 412
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>AY148220-1|AAN60162.1| 75|Homo sapiens Brk1-like protein protein.
Length = 75
Score = 124 bits (298), Expect = 6e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = +2
Query: 203 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 382
+ +Q++I QDWANREYIE+IT SIKKI DFLNSFDMSCRSRLATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 383 ACVTKGETLT 412
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>AY148219-1|AAN60161.1| 75|Homo sapiens Brk1-like protein protein.
Length = 75
Score = 124 bits (298), Expect = 6e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = +2
Query: 203 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 382
+ +Q++I QDWANREYIE+IT SIKKI DFLNSFDMSCRSRLATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 383 ACVTKGETLT 412
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>V00549-1|CAA23810.1| 188|Homo sapiens protein ( Messenger RNA for
human leukocyte (alpha) interferon. ).
Length = 188
Score = 30.3 bits (65), Expect = 9.5
Identities = 31/114 (27%), Positives = 51/114 (44%)
Frame = +2
Query: 71 DLPQFDSLIKLDNSFKILKYRVNLLYKLFKISRD*LYIMSTPPRETIQKQIQQDWANREY 250
DLPQ SL + + R L+ K D + P+E Q Q+ E
Sbjct: 25 DLPQTHSLGSRRTLMLLAQMRKISLFSCLKDRHDFGF-----PQEEFGNQFQK----AET 75
Query: 251 IEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGETLT 412
I V+ I++I + ++ D S L++ T L ++++ LEACV +G +T
Sbjct: 76 IPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACVIQGVGVT 129
>V00544-1|CAA23805.1| 188|Homo sapiens protein ( Messenger RNA for
human leukocyte interferon. ).
Length = 188
Score = 30.3 bits (65), Expect = 9.5
Identities = 31/114 (27%), Positives = 51/114 (44%)
Frame = +2
Query: 71 DLPQFDSLIKLDNSFKILKYRVNLLYKLFKISRD*LYIMSTPPRETIQKQIQQDWANREY 250
DLPQ SL + + R L+ K D + P+E Q Q+ E
Sbjct: 25 DLPQTHSLGSRRTLMLLAQMRKISLFSCLKDRHDFGF-----PQEEFGNQFQK----AET 75
Query: 251 IEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGETLT 412
I V+ I++I + ++ D S L++ T L ++++ LEACV +G +T
Sbjct: 76 IPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACVIQGVGVT 129
>M54886-1|AAA59181.1| 188|Homo sapiens interferon protein.
Length = 188
Score = 30.3 bits (65), Expect = 9.5
Identities = 31/114 (27%), Positives = 51/114 (44%)
Frame = +2
Query: 71 DLPQFDSLIKLDNSFKILKYRVNLLYKLFKISRD*LYIMSTPPRETIQKQIQQDWANREY 250
DLPQ SL + + R L+ K D + P+E Q Q+ E
Sbjct: 25 DLPQTHSLGSRRTLMLLAQMRKISLFSCLKDRHDFGF-----PQEEFGNQFQK----AET 75
Query: 251 IEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGETLT 412
I V+ I++I + ++ D S L++ T L ++++ LEACV +G +T
Sbjct: 76 IPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACVIQGVGVT 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,425,292
Number of Sequences: 237096
Number of extensions: 1925640
Number of successful extensions: 3684
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3684
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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