Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E10
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-55|CAN99710.1| 74|Caenorhabditis elegans Hypothetical p... 92 5e-19
Z71265-2|CAA95834.2| 128|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48795-5|CAA88729.1| 337|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 28 7.5
Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical pr... 28 9.9
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 28 9.9
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 28 9.9
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 28 9.9
AF125963-3|AAD14744.2| 356|Caenorhabditis elegans Serpentine re... 28 9.9
>Z99281-55|CAN99710.1| 74|Caenorhabditis elegans Hypothetical
protein Y57G11C.12a protein.
Length = 74
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/70 (54%), Positives = 59/70 (84%)
Frame = +2
Query: 203 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 382
E +Q+Q++ DW NRE+ ++I +IK I +FL+SF++SCR++LATL++KL LERK+++LE
Sbjct: 5 EAVQQQLKDDWDNREFEQIIADNIKNIANFLSSFELSCRTKLATLSDKLNLLERKVEFLE 64
Query: 383 ACVTKGETLT 412
A VTKG+TL+
Sbjct: 65 ARVTKGDTLS 74
>Z71265-2|CAA95834.2| 128|Caenorhabditis elegans Hypothetical
protein M05B5.2 protein.
Length = 128
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 288 SVIFFMLPVITSMYSLLAQSCWICFC 211
+V+ +L I + L+A SCW C+C
Sbjct: 90 AVVAIILAAIVLLLVLIAMSCWCCWC 115
>Z48795-5|CAA88729.1| 337|Caenorhabditis elegans Hypothetical
protein R05H5.6 protein.
Length = 337
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/47 (25%), Positives = 30/47 (63%)
Frame = -2
Query: 288 SVIFFMLPVITSMYSLLAQSCWICFCIVSLGGVDIIYNQSRLILNSL 148
S+ +FM+P TS Y + W+C+ ++++ V++++N + +N++
Sbjct: 167 SISYFMVPD-TSGYKMN----WLCYSLLAINSVNLVFNYFLVKINTI 208
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 426 DKFHIIISVRHKFNNVA-ITEQSLLSSITKLQ*NLDIKSTYY 548
D+F + S+ +FNN+A +T+ SLL I L +L++K+T +
Sbjct: 121 DQFETLSSIIQRFNNLANVTDNSLL-LIEMLPKDLNLKATTF 161
>Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical
protein F08B12.1 protein.
Length = 866
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 236 ANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVT 394
AN + +T +++I + F RSRL L +TSL+ K+ L+ V+
Sbjct: 660 ANSGRPKAVTLVLEQIRELEIQFAKPLRSRLEALYSNITSLDEKLSQLQVPVS 712
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 245 EYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGET 406
+ IE ++K T+ LNS + R + A +EKL L + + L A +T T
Sbjct: 1071 QMIEHAERLLQKKTEELNSIEEENRQKQAEYDEKLAQLSLQYESLSANLTNQNT 1124
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 245 EYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGET 406
+ IE ++K T+ LNS + R + A +EKL L + + L A +T T
Sbjct: 1071 QMIEHAERLLQKKTEELNSIEEENRQKQAEYDEKLAQLSLQYESLSANLTNQNT 1124
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 245 EYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGET 406
+ IE ++K T+ LNS + R + A +EKL L + + L A +T T
Sbjct: 1071 QMIEHAERLLQKKTEELNSIEEENRQKQAEYDEKLAQLSLQYESLSANLTNQNT 1124
>AF125963-3|AAD14744.2| 356|Caenorhabditis elegans Serpentine
receptor, class h protein10 protein.
Length = 356
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 655 ISIRRHSVARMNKNRISLAFSSAIYLFLLCSISVTFNE-LHK 777
I I + SV N RI + FSS + FLL I+ F++ HK
Sbjct: 135 IWIAKSSVFVKNVRRILIVFSSCTFCFLLLGITGMFDQTAHK 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,697,872
Number of Sequences: 27780
Number of extensions: 354366
Number of successful extensions: 944
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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