Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_E08
         (922 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.15 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   9.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.15
 Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
 Frame = +1

Query: 616 PKGPXXAXTLKXAXLXXFXXXXPPPLXXLQKXXPPXXXXGXP-PXGLLXIPXXFPPXXPP 792
           P GP        A L       PPPL  L+    P        P G   +P   PP  PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPP 586

Query: 793 XXPPPXXHP 819
             PP    P
Sbjct: 587 PPPPMGPPP 595


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/33 (33%), Positives = 12/33 (36%)
 Frame = +2

Query: 800 PPLXXTPXXXTXXPXPPFXPXGEXXGXFLXTPP 898
           PP+  TP      P     P GE  G     PP
Sbjct: 426 PPVRPTPSVPRPLPSQEASPSGEQPGRMGPPPP 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,258
Number of Sequences: 2352
Number of extensions: 6114
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)