Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E06
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.71
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 2.2
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 30 2.9
12_02_1174 - 26696869-26698191 29 3.8
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 5.0
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 5.0
01_01_0083 + 631196-631675 29 5.0
07_03_1771 - 29404972-29405175,29405282-29405677 28 8.7
01_03_0005 + 11568545-11569119,11569179-11569191 28 8.7
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 28 8.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.71
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 437 PXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P PPP GPP K PP GG G P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGP 377
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 437 PXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P PPP GPP K P PP G PP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPP-PPPPKGPSPPPP 367
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 413 PKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P P PPP PP K P PP G GPP
Sbjct: 575 PMPPLKASPVPPPEPSPPPAPKAAPPP---PPPKSTGPGPP 612
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 407 KXPKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
K PK + P PPP PP P G G PP
Sbjct: 75 KHPKPKQQQHPPPPPPQKPPQGSTNLSLPNPSGSGSGNGNPPP 117
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 369 PPKXXXXXFXXKKXPPKKXXXKNPXPPPXXXPPXXKKKKXXPXXGXP 509
PP K PP +P PPP PP K P P
Sbjct: 167 PPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPP 213
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 694 PXXGGGGGGFXXKKXPPPP 750
P GGGGGG PPPP
Sbjct: 31 PSCGGGGGGAGPTPPPPPP 49
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +3
Query: 255 PPPXXXGXKXPXKXXXXXXXKXXKXXXXPXGXFXGKKXPPKXXXXXFXXKKXPPKKXXXK 434
P P P K K K P G K PK K PPK
Sbjct: 159 PGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKP 218
Query: 435 NPXPPPXXXPPXXKKKKXXP 494
P PP P K P
Sbjct: 219 KPGPPQPWWPIPFPKPPCPP 238
>01_01_0083 + 631196-631675
Length = 159
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 682 FFFXPXXGGGGGGFXXKKXPPPP 750
++ P GGGGGG PPPP
Sbjct: 90 YYQPPAGGGGGGGGFNYPAPPPP 112
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 703 GGGGGGFXXKKXPPPPXXXGXFFW 774
GGGGGGF PPP + W
Sbjct: 98 GGGGGGFNYPAPPPPNPIVPWYPW 121
>07_03_1771 - 29404972-29405175,29405282-29405677
Length = 199
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +2
Query: 437 PXPPPXXGPPXXK-KKKXXPXGGXPPXGGGXG 529
P PPP PP K K P G P GG G
Sbjct: 19 PPPPPPPLPPAHKDKAAYNPYSGCPAHGGDDG 50
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 702 GGGGGGFXXKKXPPPPXGXG 761
GGGGGG PPPP G
Sbjct: 81 GGGGGGTVMYTSPPPPYSGG 100
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 663 FPPXXFFFFFXXXGGGGGGFXXKKXPPPPXGXGXF 767
FPP F FF GGGGGG + P G F
Sbjct: 44 FPP---FGFFGGTGGGGGGSSSRAQERQPGGIDAF 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.151 0.534
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,932,582
Number of Sequences: 37544
Number of extensions: 403048
Number of successful extensions: 1784
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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