Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_E06
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.28
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.64
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 4.5
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 4.5
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 24 6.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 413 PKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPPXKKK 547
P + P PPP PP G PP G G PP ++
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 335
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 413 PKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P P PPP G P GG PP G PP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +2
Query: 404 KKXPKKXXXKKPXPPPXXG---PPXXKKKKXXPXGGXPPXGGGXGPP 535
K P P PPP G PP P G PP G PP
Sbjct: 244 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 413 PKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPPXKKK 547
P + P PPP PP G PP G G PP ++
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 356
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 413 PKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P P PPP G P GG PP G PP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +2
Query: 404 KKXPKKXXXKKPXPPPXXG---PPXXKKKKXXPXGGXPPXGGGXGPP 535
K P P PPP G PP P G PP G PP
Sbjct: 265 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 413 PKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPPXKKK 547
P + P PPP PP G PP G G PP ++
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 341
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 413 PKKXXXKKPXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P P PPP G P GG PP G PP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +2
Query: 404 KKXPKKXXXKKPXPPPXXG---PPXXKKKKXXPXGGXPPXGGGXGPP 535
K P P PPP G PP P G PP G PP
Sbjct: 250 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 437 PXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P PPP P P GG PP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 437 PXPPPXXGPPXXK-KKKXXPXGGXPPXGGGXGPP 535
P PPP PP P GG PP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 437 PXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P PPP P P GG PP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 437 PXPPPXXGPPXXK-KKKXXPXGGXPPXGGGXGPP 535
P PPP PP P GG PP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 437 PXPPPXXGPPXXKKKKXXPXGGXPPXGGGXGPP 535
P PPP P P GG PP GG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 437 PXPPPXXGPPXXK-KKKXXPXGGXPPXGGGXGPP 535
P PPP PP P GG PP GG PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 684 FFFXXXGGGGGGFXXKKXPPPPXGXG 761
F F GGGGGG PPPP G G
Sbjct: 16 FLFNLLGGGGGG-CCAPPPPPPCGGG 40
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 685 FFXPXXGGGGGGFXXKKXPPPP 750
F P GGGGGG PPPP
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP 38
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 684 FFFXXXGGGGGGFXXKKXPPPP 749
F F GGGGGG PPPP
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP 38
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 687 FFXXXGGGGGGFXXKKXPPPPXGXGXFFLGP 779
F GGGGG PPPP G G L P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 687 FFXXXGGGGGGFXXKKXPPPPXGXGXFFLGP 779
F GGGGG PPPP G G L P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPP 47
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 687 FFXXXGGGGGGFXXKKXPPPPXGXGXFFLGP 779
F GGGGG PPPP G G L P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 667 PPXXFFFFXPXXGGGGGGFXXKK--XPPPP 750
PP + P GGGGGG+ + PPPP
Sbjct: 71 PPFDGGYNRPYGGGGGGGYGRPQGYVPPPP 100
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 24.2 bits (50), Expect(2) = 6.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 703 GGGGGGFXXKKXPPPPXXXG 762
GGGG G PPPP G
Sbjct: 44 GGGGCGGGCAPPPPPPACGG 63
Score = 22.6 bits (46), Expect(2) = 6.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 685 FFXPXXGGGGGG 720
F P GGGGGG
Sbjct: 18 FLFPSGGGGGGG 29
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.151 0.534
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,283,459
Number of Sequences: 27780
Number of extensions: 234696
Number of successful extensions: 1055
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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