Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_E03
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0682 - 16916437-16916686,16916761-16916822,16917082-169171...    29   6.6  
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342...    28   8.7  

>05_03_0682 -
           16916437-16916686,16916761-16916822,16917082-16917147,
           16917606-16917737,16917925-16918026,16918146-16918343,
           16918409-16918555,16918804-16918914,16919661-16920194,
           16920269-16920425,16920511-16920660,16920744-16920883,
           16921668-16921784,16922759-16922932,16923020-16923187,
           16923323-16923464,16923610-16923728,16924997-16925098,
           16925618-16925701,16926843-16927142
          Length = 1084

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +1

Query: 304 KRTSNQMVEKHKENVMRSKK*TPIKEIIFVVIDSLEYDHLHSTNGSRQKKYEL-SNHWKM 480
           K + NQ +   K  +  S++  P++  +   I SLE   +   + S+++KY +  N W+M
Sbjct: 646 KTSFNQPLLNRKAKLDSSRQDLPMRGFVDN-ISSLESSSIRHFDSSKEEKYHMDKNWWEM 704

Query: 481 RKNRNTVKKYYD 516
           ++  + V    D
Sbjct: 705 QERGDQVASVLD 716


>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
            26834330-26834732,26834840-26835118,26835285-26835716,
            26836362-26836838,26837171-26837212,26837285-26837545,
            26837637-26838938,26839146-26839575,26839643-26840046,
            26840360-26840716,26840842-26841102,26841494-26842141,
            26842231-26842452,26842547-26842768,26842860-26843009,
            26843739-26844111,26844467-26844689,26845167-26845425,
            26845585-26845920,26846013-26846999,26848395-26849624,
            26849706-26849768,26849858-26849910,26849998-26850079,
            26850520-26850588,26851070-26851129,26851205-26851267,
            26851993-26852101,26852742-26852827,26853120-26853847,
            26854613-26854676
          Length = 3716

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +1

Query: 253  LIIDSITINCKIKKRVIK--RTSNQMVEKHKENVMRSKK-*TPIKEIIFVVIDSLEYDHL 423
            ++  S+T N +  +R+++  R  N+M +KHKE+  R     TPI   ++  +  +E D +
Sbjct: 3374 IVQTSLTPNARSDERMLQLFRVLNKMFDKHKESRQRHLAIHTPIIIPVWSQVRMVEDDLM 3433

Query: 424  HST 432
            +ST
Sbjct: 3434 YST 3436


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,578,109
Number of Sequences: 37544
Number of extensions: 322312
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)