Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_E01
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    31   1.6  
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical...    29   3.7  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    29   3.7  
U29096-1|AAA68406.1|  105|Caenorhabditis elegans Neuropeptide-li...    29   6.4  
U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = -2

Query: 773 GWXXGGGXXGGGXGGKXXGKGKXPXGGXPPVEXXVXFXKXLXGGGTFG 630
           G   GGG  GGG  G   G G    GG P       +     GGG FG
Sbjct: 116 GGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFG 163



 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -2

Query: 800 GXXFXXXXXGWXXGGGXXGGGXGGKXXGKGKXPXGG 693
           G  +     G   GGG  GGG GG   G G    GG
Sbjct: 172 GGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGG 207


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -2

Query: 761 GGGXXGGGXGGKXXGKGKXPXGGXPPVEXXVXFXKXLXGGGTFGXN 624
           GGG  GGG GG   G+G    GG         +     GGG  G N
Sbjct: 25  GGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSN 70


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2

Query: 773 GWXXGGGXXGGGXGGKXXGKGKXPXGG 693
           G   GGG  GGG GG   G+G    GG
Sbjct: 92  GGRGGGGGGGGGRGGGGGGRGGGGGGG 118


>AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical
           protein Y116A8C.35 protein.
          Length = 285

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -2

Query: 773 GWXXGGGXXGGGXGGKXXGKGKXPXGG 693
           GW  GGG  G G GG   G G    GG
Sbjct: 246 GWGGGGGGRGYGGGGGGGGYGYGGGGG 272


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -2

Query: 773 GWXXGGGXXGGGXGGKXXGKGKXPXGG 693
           GW  GGG  GG  GG   G G     G
Sbjct: 56  GWGRGGGRGGGDWGGNNGGGGNWGGNG 82


>U29096-1|AAA68406.1|  105|Caenorhabditis elegans Neuropeptide-like
           protein protein32 protein.
          Length = 105

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 773 GWXXGGGXXGGGXGGKXXGKG 711
           GW  GGG   GG GG   G+G
Sbjct: 63  GWGRGGGRGYGGRGGGWGGRG 83


>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 773 GWXXGGGXXGGGXGGKXXGKGKXPXGGXPP 684
           G+  GGG  GGG GG   G G  P GG  P
Sbjct: 488 GFGGGGGGFGGGGGG--FGSGS-PFGGAAP 514


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,083,827
Number of Sequences: 27780
Number of extensions: 85581
Number of successful extensions: 1231
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)