Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_D21
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0284 + 32836171-32836377,32836466-32836568,32836681-328367...    30   2.1  
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416...    29   4.9  
01_01_1125 - 8920590-8924372                                           28   8.6  

>03_06_0284 +
           32836171-32836377,32836466-32836568,32836681-32836757,
           32836846-32837037,32837144-32837263,32837350-32837412,
           32837537-32837671,32837827-32837991,32838104-32838181,
           32840303-32840389,32840548-32840619,32840925-32840951,
           32842292-32842390,32843143-32843213,32843710-32843838,
           32843936-32844012,32844186-32844226,32844319-32844393,
           32844525-32844673,32844766-32844870,32844948-32845023,
           32845465-32845541,32845761-32846529
          Length = 997

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 352 GQYSGYTGRCHRQSGQSDRAKYLPPFHTKLGQYSHTALLKRH 227
           GQ       C R SGQ+D+   LPP H K  Q+ +  +L+ +
Sbjct: 269 GQVGHLAAEC-RGSGQADKTVELPPIHKKKYQFLNIWVLREY 309


>12_02_1128 -
           26341118-26341204,26341302-26341441,26341567-26341663,
           26341755-26341830,26341919-26342118,26342199-26342297,
           26342395-26342479,26342786-26343024,26343233-26343403,
           26343605-26343848,26343980-26344253,26344755-26344934,
           26345342-26345423,26346209-26346278,26346802-26346901,
           26347003-26347097,26347181-26347317,26347342-26347420,
           26347591-26347651,26348580-26349009
          Length = 981

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 226 DASSTMLCDCTARVWCEMEGGISRGQTGPTADDSGQCSQSTDQT 357
           D+SS  + D  A VWC+ +  ++  +TG  + D+     S + T
Sbjct: 346 DSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDASVELT 389


>01_01_1125 - 8920590-8924372
          Length = 1260

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +1

Query: 190  KQVKRP-SNDNSSDASSTMLCDCTARVWCEMEGGISRGQTGPTADDSGQCSQSTDQT 357
            K V+ P + D + D    +LC  T  V      GIS G   PT D +      +D T
Sbjct: 1157 KNVETPVAYDRNMDNPGQVLCSTTYGVSSNCLHGISEGTVQPTIDGAENLCTPSDDT 1213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,501,833
Number of Sequences: 37544
Number of extensions: 375727
Number of successful extensions: 881
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)