Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_D21
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051772-1|AAK93196.1|  673|Drosophila melanogaster LD29879p pro...    32   0.91 
AE013599-3917|AAF47240.1|  673|Drosophila melanogaster CG4707-PA...    32   0.91 
AY118560-1|AAM49929.1|  528|Drosophila melanogaster LD37992p pro...    31   1.6  
AF467271-1|AAM74566.1|  528|Drosophila melanogaster coronin prot...    31   1.6  
AE013599-240|AAS64781.1|  528|Drosophila melanogaster CG9446-PC,...    31   1.6  
AE013599-239|AAM70835.1|  528|Drosophila melanogaster CG9446-PB,...    31   1.6  
AE013599-238|AAF57403.1|  528|Drosophila melanogaster CG9446-PA,...    31   1.6  

>AY051772-1|AAK93196.1|  673|Drosophila melanogaster LD29879p
           protein.
          Length = 673

 Score = 32.3 bits (70), Expect = 0.91
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 328 RCHRQSGQSDRAKYLPPFHTKLGQYSHTALLKRHPS 221
           R HR   ++DR K LPP   K+ Q + TA+ KR  S
Sbjct: 627 RLHRAEWEADRKKPLPPNIMKISQGATTAMKKRQTS 662


>AE013599-3917|AAF47240.1|  673|Drosophila melanogaster CG4707-PA
           protein.
          Length = 673

 Score = 32.3 bits (70), Expect = 0.91
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 328 RCHRQSGQSDRAKYLPPFHTKLGQYSHTALLKRHPS 221
           R HR   ++DR K LPP   K+ Q + TA+ KR  S
Sbjct: 627 RLHRAEWEADRKKPLPPNIMKISQGATTAMKKRQTS 662


>AY118560-1|AAM49929.1|  528|Drosophila melanogaster LD37992p
           protein.
          Length = 528

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 205 PSNDNSSDASSTMLCDCTARVWCEMEGGISRGQTGPTAD 321
           P NDN   + S    DC  +VW   +GG+SR  T P  D
Sbjct: 91  PHNDNVIASGSE---DCVVKVWQIPDGGLSRTLTEPVVD 126


>AF467271-1|AAM74566.1|  528|Drosophila melanogaster coronin
           protein.
          Length = 528

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 205 PSNDNSSDASSTMLCDCTARVWCEMEGGISRGQTGPTAD 321
           P NDN   + S    DC  +VW   +GG+SR  T P  D
Sbjct: 91  PHNDNVIASGSE---DCVVKVWQIPDGGLSRTLTEPVVD 126


>AE013599-240|AAS64781.1|  528|Drosophila melanogaster CG9446-PC,
           isoform C protein.
          Length = 528

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 205 PSNDNSSDASSTMLCDCTARVWCEMEGGISRGQTGPTAD 321
           P NDN   + S    DC  +VW   +GG+SR  T P  D
Sbjct: 91  PHNDNVIASGSE---DCVVKVWQIPDGGLSRTLTEPVVD 126


>AE013599-239|AAM70835.1|  528|Drosophila melanogaster CG9446-PB,
           isoform B protein.
          Length = 528

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 205 PSNDNSSDASSTMLCDCTARVWCEMEGGISRGQTGPTAD 321
           P NDN   + S    DC  +VW   +GG+SR  T P  D
Sbjct: 91  PHNDNVIASGSE---DCVVKVWQIPDGGLSRTLTEPVVD 126


>AE013599-238|AAF57403.1|  528|Drosophila melanogaster CG9446-PA,
           isoform A protein.
          Length = 528

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 205 PSNDNSSDASSTMLCDCTARVWCEMEGGISRGQTGPTAD 321
           P NDN   + S    DC  +VW   +GG+SR  T P  D
Sbjct: 91  PHNDNVIASGSE---DCVVKVWQIPDGGLSRTLTEPVVD 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,548,207
Number of Sequences: 53049
Number of extensions: 644334
Number of successful extensions: 2186
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2186
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)