Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_D20
         (915 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    32   0.95 
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    32   0.95 

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 619 FXGGXGXGGXKKXPXXPGGGGF 554
           F GG G GG    P  PGGGGF
Sbjct: 377 FGGGGGRGGAPGAPGSPGGGGF 398



 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 619 FXGGXGXGGXKKXPXXPGGGGF 554
           F GG G GG    P  PGGGG+
Sbjct: 311 FGGGGGRGGAPGAPGSPGGGGY 332



 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 619 FXGGXGXGGXKKXPXXPGGGGF 554
           + GG G GG    P  PGGGGF
Sbjct: 407 YGGGAGRGGAPGAPGSPGGGGF 428



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 613 GGXGXGGXKKXPXXPGGGGF 554
           GG G GG    P  PGGGGF
Sbjct: 215 GGSGRGGAPGGPGAPGGGGF 234



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 613 GGXGXGGXKKXPXXPGGGGF 554
           GG G GG    P  PGGGGF
Sbjct: 248 GGAGRGGSPGGPGSPGGGGF 267



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 613 GGXGXGGXKKXPXXPGGGGF 554
           GG G GG    P  PGGGGF
Sbjct: 283 GGRGGGGAPGAPGSPGGGGF 302


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -3

Query: 619 FXGGXGXGGXKKXPXXPGGGGF 554
           F GG G GG    P  PGGGGF
Sbjct: 449 FGGGGGRGGAPGAPGSPGGGGF 470



 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 619 FXGGXGXGGXKKXPXXPGGGGF 554
           F GG G GG    P  PGGGG+
Sbjct: 383 FGGGGGRGGAPGAPGSPGGGGY 404



 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 619 FXGGXGXGGXKKXPXXPGGGGF 554
           + GG G GG    P  PGGGGF
Sbjct: 479 YGGGAGRGGAPGAPGSPGGGGF 500



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 613 GGXGXGGXKKXPXXPGGGGF 554
           GG G GG    P  PGGGGF
Sbjct: 287 GGSGRGGAPGGPGAPGGGGF 306



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 613 GGXGXGGXKKXPXXPGGGGF 554
           GG G GG    P  PGGGGF
Sbjct: 320 GGAGRGGSPGGPGSPGGGGF 339



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 613 GGXGXGGXKKXPXXPGGGGF 554
           GG G GG    P  PGGGGF
Sbjct: 355 GGRGGGGAPGAPGSPGGGGF 374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,579,536
Number of Sequences: 53049
Number of extensions: 239227
Number of successful extensions: 592
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)