Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_D13
         (902 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open readi...    56   2e-07
AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.              56   2e-07

>BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open reading
           frame 13 protein.
          Length = 511

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 36/108 (33%), Positives = 48/108 (44%)
 Frame = +2

Query: 377 KIDLPEGTHIIGRGKFIVNDAEDMRVSRNHAEIEVTDTCVILKSLHXNPCFYIDKLSNSK 556
           ++ L  G  +IGRG  +     D RVSR HA +EV    + +K +H NPCFY     +  
Sbjct: 15  RVALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQL 72

Query: 557 RTLXQNNAQLLCNGDKXGILPDTYWFELIWCSSXVMKNDVXXNSTPAD 700
             L  N    L  GD   +L D Y F ++   S V       NS   D
Sbjct: 73  LPLKPNLWCYLNPGDSFSLLVDKYIFRILSIPSEVEMQCTLRNSQVLD 120


>AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.
          Length = 207

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 36/108 (33%), Positives = 48/108 (44%)
 Frame = +2

Query: 377 KIDLPEGTHIIGRGKFIVNDAEDMRVSRNHAEIEVTDTCVILKSLHXNPCFYIDKLSNSK 556
           ++ L  G  +IGRG  +     D RVSR HA +EV    + +K +H NPCFY     +  
Sbjct: 15  RVALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQL 72

Query: 557 RTLXQNNAQLLCNGDKXGILPDTYWFELIWCSSXVMKNDVXXNSTPAD 700
             L  N    L  GD   +L D Y F ++   S V       NS   D
Sbjct: 73  LPLKPNLWCYLNPGDSFSLLVDKYIFRILSIPSEVEMQCTLRNSQVLD 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,768,034
Number of Sequences: 237096
Number of extensions: 1475099
Number of successful extensions: 1890
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1890
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)