Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_D09
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   4.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 230 WPQPALVVKVASS 268
           WPQP  V K++S+
Sbjct: 72  WPQPTSVTKISST 84


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 623 GEPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTEPI 760
           G P K+  E  E   E S +E  EE K   E  EDK  + P  E +
Sbjct: 208 GYPIKLVVEK-EREKELSDDEAEEEKK--EEEGEDKDKDKPKIEDV 250


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = +2

Query: 626 EPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTEPITNGHSTPE 784
           EP   PE     T E    +  E+    S   + +  +TP +   ++G  T E
Sbjct: 394 EPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGNESDGVCTKE 446


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 290 LNHKLMATPISMNR 331
           L H+LM  PIS++R
Sbjct: 708 LGHRLMELPISVDR 721


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 290 LNHKLMATPISMNR 331
           L H+LM  PIS++R
Sbjct: 708 LGHRLMELPISVDR 721


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 290 LNHKLMATPISMNR 331
           L H+LM  PIS++R
Sbjct: 708 LGHRLMELPISVDR 721


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 290 LNHKLMATPISMNR 331
           L H+LM  PIS++R
Sbjct: 708 LGHRLMELPISVDR 721


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +2

Query: 704 TPSEANEDKXPETPVTEPITNGHSTPETPQ 793
           TP+ A     PE     P      TP +P+
Sbjct: 38  TPNSAASPAPPEEEAASPTPGDVPTPSSPR 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,748
Number of Sequences: 336
Number of extensions: 2828
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)