Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_D09
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding pro... 38 0.066
AL391294-4|CAI39707.1| 161|Homo sapiens nucleosomal binding pro... 38 0.066
AL391294-3|CAI39710.1| 201|Homo sapiens nucleosomal binding pro... 38 0.066
AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding pro... 38 0.066
AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding pro... 38 0.066
AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding pro... 38 0.066
AL391294-2|CAI39709.1| 148|Homo sapiens nucleosomal binding pro... 37 0.087
AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens ... 35 0.46
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 33 1.4
EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein. 33 1.4
EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein. 33 1.4
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 33 1.4
AK094058-1|BAC04274.1| 225|Homo sapiens protein ( Homo sapiens ... 33 1.4
AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD... 33 1.4
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 32 3.3
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 32 3.3
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 32 3.3
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 32 3.3
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 32 3.3
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 32 3.3
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 32 3.3
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 32 3.3
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 32 3.3
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 32 3.3
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 32 3.3
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 32 3.3
U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein. 31 4.3
U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain p... 31 4.3
D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB... 31 4.3
BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box bindi... 31 4.3
AL355148-2|CAI15107.1| 1104|Homo sapiens zinc finger E-box bindi... 31 4.3
AL355148-1|CAI15108.1| 1124|Homo sapiens zinc finger E-box bindi... 31 4.3
AL161935-2|CAH74131.1| 1104|Homo sapiens zinc finger E-box bindi... 31 4.3
AL161935-1|CAH74132.1| 1124|Homo sapiens zinc finger E-box bindi... 31 4.3
AL158080-2|CAI17319.1| 1104|Homo sapiens zinc finger E-box bindi... 31 4.3
AL158080-1|CAI17320.1| 1124|Homo sapiens zinc finger E-box bindi... 31 4.3
AL117340-2|CAI12549.1| 1104|Homo sapiens zinc finger E-box bindi... 31 4.3
AL117340-1|CAI12550.1| 1124|Homo sapiens zinc finger E-box bindi... 31 4.3
BC130281-1|AAI30282.1| 1222|Homo sapiens CCDC108 protein protein. 31 5.7
BC086875-1|AAH86875.1| 683|Homo sapiens FAM13A1 protein protein. 31 5.7
BC035589-1|AAH35589.1| 1832|Homo sapiens zinc finger protein 646... 31 5.7
AK125957-1|BAC86362.1| 1215|Homo sapiens protein ( Homo sapiens ... 31 5.7
AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein. 31 5.7
X15187-1|CAA33261.1| 803|Homo sapiens precursor polypeptide (AA... 31 7.5
BC066656-1|AAH66656.1| 803|Homo sapiens heat shock protein 90kD... 31 7.5
AY040226-1|AAK74072.1| 782|Homo sapiens heat shock protein gp96... 31 7.5
AK091328-1|BAC03636.1| 466|Homo sapiens protein ( Homo sapiens ... 31 7.5
AB020721-1|BAA74937.3| 678|Homo sapiens KIAA0914 protein protein. 31 7.5
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 30 10.0
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 30 10.0
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 10.0
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 30 10.0
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 10.0
AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein. 30 10.0
>BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
Query: 427 AGPVTNGESEQKAENGESVTTTPDD 501
E +Q E GE+ D+
Sbjct: 129 --DQKEDEEDQNEEKGEAGKEDKDE 151
>AL391294-4|CAI39707.1| 161|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.066
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 59 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 118
Query: 427 AGPVTNGESEQKAENGESVTTTPDD 501
E +Q E GE+ D+
Sbjct: 119 --DQKEDEEDQNEEKGEAGKEDKDE 141
>AL391294-3|CAI39710.1| 201|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 201
Score = 37.5 bits (83), Expect = 0.066
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 49 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 108
Query: 427 AGPVTNGESEQKAENGESVTTTPDD 501
E +Q E GE+ D+
Sbjct: 109 --DQKEDEEDQNEEKGEAGKEDKDE 131
>AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
Query: 427 AGPVTNGESEQKAENGESVTTTPDD 501
E +Q E GE+ D+
Sbjct: 129 --DQKEDEEDQNEEKGEAGKEDKDE 151
>AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
Query: 427 AGPVTNGESEQKAENGESVTTTPDD 501
E +Q E GE+ D+
Sbjct: 129 --DQKEDEEDQNEEKGEAGKEDKDE 151
>AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
Query: 427 AGPVTNGESEQKAENGESVTTTPDD 501
E +Q E GE+ D+
Sbjct: 129 --DQKEDEEDQNEEKGEAGKEDKDE 151
>AL391294-2|CAI39709.1| 148|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 148
Score = 37.1 bits (82), Expect = 0.087
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
Query: 427 AGPVTNGESEQKAENGES 480
E +Q E GE+
Sbjct: 129 --DQKEDEEDQNEEKGEA 144
>AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens cDNA
FLJ34159 fis, clone FCBBF3013623, highly similar to
NIL-2-A ZINC FINGER PROTEIN. ).
Length = 1104
Score = 34.7 bits (76), Expect = 0.46
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G GE E++ E E V
Sbjct: 1000 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEGEEEEEVEE-EEVE 1058
Query: 487 TTPDDG 504
++G
Sbjct: 1059 EAENEG 1064
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 280 VDALKPQIN---GDAHIHEQTAKEKELDSGTPENE-KDATTEKEAIEISNEKEAGPVTNG 447
V A P++ G+ E +E+E D G ++ ++ +EKE S+EKE G G
Sbjct: 513 VKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEG---SSEKEEGEQEEG 569
Query: 448 ESEQKAENGES 480
E+E +AE E+
Sbjct: 570 ETEAEAEGEEA 580
>EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein.
Length = 877
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 280 VDALKPQIN---GDAHIHEQTAKEKELDSGTPENE-KDATTEKEAIEISNEKEAGPVTNG 447
V A P++ G+ E +E+E D G ++ ++ +EKE S+EKE G G
Sbjct: 513 VKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEG---SSEKEEGEQEEG 569
Query: 448 ESEQKAENGES 480
E+E +AE E+
Sbjct: 570 ETEAEAEGEEA 580
>EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein.
Length = 916
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 280 VDALKPQIN---GDAHIHEQTAKEKELDSGTPENE-KDATTEKEAIEISNEKEAGPVTNG 447
V A P++ G+ E +E+E D G ++ ++ +EKE S+EKE G G
Sbjct: 513 VKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEG---SSEKEEGEQEEG 569
Query: 448 ESEQKAENGES 480
E+E +AE E+
Sbjct: 570 ETEAEAEGEEA 580
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 280 VDALKPQIN---GDAHIHEQTAKEKELDSGTPENE-KDATTEKEAIEISNEKEAGPVTNG 447
V A P++ G+ E +E+E D G ++ ++ +EKE S+EKE G G
Sbjct: 513 VKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEG---SSEKEEGEQEEG 569
Query: 448 ESEQKAENGES 480
E+E +AE E+
Sbjct: 570 ETEAEAEGEEA 580
>AK094058-1|BAC04274.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ36739 fis, clone UTERU2013262, weakly similar to
AXONEME-ASSOCIATED PROTEIN MST101(2). ).
Length = 225
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDAT----TEKEAI--EISNEKE 426
E + + D + NG+A I E A EKE+ EN +DAT +KEA+ E+ NE+E
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
>AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD
medium) protein.
Length = 260
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 280 VDALKPQIN---GDAHIHEQTAKEKELDSGTPENE-KDATTEKEAIEISNEKEAGPVTNG 447
V A P++ G+ E +E+E D G ++ ++ +EKE S+EKE G G
Sbjct: 76 VKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEG---SSEKEEGEQEEG 132
Query: 448 ESEQKAENGES 480
E+E +AE E+
Sbjct: 133 ETEAEAEGEEA 143
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 629 PEK-VP--EEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTE 754
PEK +P EEV E+ + + V+ + P +A E+K P TP TE
Sbjct: 810 PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTE 854
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 629 PEK-VP--EEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTE 754
PEK +P EEV E+ + + V+ + P +A E+K P TP TE
Sbjct: 816 PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTE 860
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 629 PEK-VP--EEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTE 754
PEK +P EEV E+ + + V+ + P +A E+K P TP TE
Sbjct: 148 PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTE 192
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISN-EKEAGPVTNGESEQKAE 468
P+ GDA E A+ + D PE E +A E E +E E E P + G +AE
Sbjct: 1934 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAE 1992
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISN-EKEAGPVTNGESEQKAE 468
P+ GDA E A+ + D PE E +A E E +E E E P + G +AE
Sbjct: 1918 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAE 1976
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISN-EKEAGPVTNGESEQKAE 468
P+ GDA E A+ + D PE E +A E E +E E E P + G +AE
Sbjct: 1902 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAE 1960
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISN-EKEAGPVTNGESEQKAE 468
P+ GDA E A+ + D PE E +A E E +E E E P + G +AE
Sbjct: 1886 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAE 1944
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISN-EKEAGPVTNGESEQKAE 468
P+ GDA E A+ + D PE E +A E E +E E E P + G +AE
Sbjct: 1870 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAE 1928
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISN-EKEAGPVTNGESEQKAE 468
P+ GDA E A+ + D PE E +A E E +E E E P + G +AE
Sbjct: 1854 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAE 1912
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISN-EKEAGPVTNGESEQKAE 468
P+ GDA E A+ + D PE E +A E E +E E E P + G +AE
Sbjct: 1918 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAE 1976
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 629 PEK-VP--EEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTE 754
PEK +P EEV E+ + + V+ + P +A E+K P TP TE
Sbjct: 816 PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTE 860
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 629 PEK-VP--EEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTE 754
PEK +P EEV E+ + + V+ + P +A E+K P TP TE
Sbjct: 824 PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTE 868
>U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein.
Length = 1154
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1050 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1108
Query: 487 TTPDDG 504
++G
Sbjct: 1109 EAENEG 1114
>U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain
protein protein.
Length = 1124
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1020 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1078
Query: 487 TTPDDG 504
++G
Sbjct: 1079 EAENEG 1084
>D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB6
protein.
Length = 1124
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1020 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1078
Query: 487 TTPDDG 504
++G
Sbjct: 1079 EAENEG 1084
>BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1125
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1021 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1079
Query: 487 TTPDDG 504
++G
Sbjct: 1080 EAENEG 1085
>AL355148-2|CAI15107.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1000 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1058
Query: 487 TTPDDG 504
++G
Sbjct: 1059 EAENEG 1064
>AL355148-1|CAI15108.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1020 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1078
Query: 487 TTPDDG 504
++G
Sbjct: 1079 EAENEG 1084
>AL161935-2|CAH74131.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1000 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1058
Query: 487 TTPDDG 504
++G
Sbjct: 1059 EAENEG 1064
>AL161935-1|CAH74132.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1020 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1078
Query: 487 TTPDDG 504
++G
Sbjct: 1079 EAENEG 1084
>AL158080-2|CAI17319.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1000 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1058
Query: 487 TTPDDG 504
++G
Sbjct: 1059 EAENEG 1064
>AL158080-1|CAI17320.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1020 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1078
Query: 487 TTPDDG 504
++G
Sbjct: 1079 EAENEG 1084
>AL117340-2|CAI12549.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1000 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1058
Query: 487 TTPDDG 504
++G
Sbjct: 1059 EAENEG 1064
>AL117340-1|CAI12550.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 307 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 486
GD+ E +E++ DS E E+D E+ E EK G E E++ E E V
Sbjct: 1020 GDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEE-EEVE 1078
Query: 487 TTPDDG 504
++G
Sbjct: 1079 EAENEG 1084
>BC130281-1|AAI30282.1| 1222|Homo sapiens CCDC108 protein protein.
Length = 1222
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +2
Query: 623 GEPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTEPITNGHSTPETPQVE 799
GE EK EE E E+ + E EE + E E+K E E + TPQ E
Sbjct: 1060 GEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEERDEKEEKVSWAGIGPTPQPE 1118
>BC086875-1|AAH86875.1| 683|Homo sapiens FAM13A1 protein protein.
Length = 683
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEA 429
++L D A+KP I ++ +EK +S PE+ KD T + +I+NEK A
Sbjct: 418 QELVD-KAIKPSIEATLESIQRKLQEKRAESSRPEDIKDMTKD----QIANEKVA 467
>BC035589-1|AAH35589.1| 1832|Homo sapiens zinc finger protein 646
protein.
Length = 1832
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 289 LKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAE 468
L+ G + + Q + ++ +GT E++ + +A E +E GP GES ++A
Sbjct: 1604 LQAHARGHSQVPAQMEEARDPKAGTGEDQVVLPGQGKAQEAPSETPRGP---GESVERAR 1660
Query: 469 NGESVTT 489
G++VT+
Sbjct: 1661 GGQAVTS 1667
>AK125957-1|BAC86362.1| 1215|Homo sapiens protein ( Homo sapiens cDNA
FLJ43969 fis, clone TESTI4017575. ).
Length = 1215
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +2
Query: 623 GEPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKXPETPVTEPITNGHSTPETPQVE 799
GE EK EE E E+ + E EE + E E+K E E + TPQ E
Sbjct: 1053 GEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEERDEKEEKVSWAGIGPTPQPE 1111
>AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein.
Length = 1838
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 289 LKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAE 468
L+ G + + Q + ++ +GT E++ + +A E +E GP GES ++A
Sbjct: 1613 LQAHARGHSQVPAQMEEARDPKAGTGEDQVVLPGQGKAQEAPSETPRGP---GESVERAR 1669
Query: 469 NGESVTT 489
G++VT+
Sbjct: 1670 GGQAVTS 1676
>X15187-1|CAA33261.1| 803|Homo sapiens precursor polypeptide (AA-21
to 782) protein.
Length = 803
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 626 EPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKXPET 742
EPE+ PEE E T E ++ + EE+ ++ E+ E+
Sbjct: 758 EPEEEPEETAEDTTEDTEQDEDEEMDVGTDEEEETAKES 796
>BC066656-1|AAH66656.1| 803|Homo sapiens heat shock protein 90kDa
beta (Grp94), member 1 protein.
Length = 803
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 626 EPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKXPET 742
EPE+ PEE E T E ++ + EE+ ++ E+ E+
Sbjct: 758 EPEEEPEETAEDTTEDTEQDEDEEMDVGTDEEEETAKES 796
>AY040226-1|AAK74072.1| 782|Homo sapiens heat shock protein gp96
precursor protein.
Length = 782
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 626 EPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKXPET 742
EPE+ PEE E T E ++ + EE+ ++ E+ E+
Sbjct: 737 EPEEEPEETAEDTTEDTEQDEDEEMDVGTDEEEETAKES 775
>AK091328-1|BAC03636.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ34009 fis, clone FCBBF1000476, weakly similar to
Homo sapiens GAP-like protein (N61) mRNA. ).
Length = 466
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEA 429
++L D A+KP + ++ +EK +S PE+ KD T + +I+NEK A
Sbjct: 229 QELVD-KAIKPSVEATLESIQRKLQEKRAESSRPEDIKDMTKD----QIANEKVA 278
>AB020721-1|BAA74937.3| 678|Homo sapiens KIAA0914 protein protein.
Length = 678
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 265 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEA 429
++L D A+KP + ++ +EK +S PE+ KD T + +I+NEK A
Sbjct: 441 QELVD-KAIKPSVEATLESIQRKLQEKRAESSRPEDIKDMTKD----QIANEKVA 490
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +1
Query: 322 HEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 501
H Q+ + D EN+K A +K+ I+ E + G + G E +E+G+ +P
Sbjct: 940 HHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVG-IERGNIETTSEDGQ--VFSPKK 996
Query: 502 GXXXXXXXXXXXWSLRVYQLQQER*AQTRKEAKG 603
G S + E AQ K+ +G
Sbjct: 997 GQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRG 1030
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +1
Query: 322 HEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 501
H Q+ + D EN+K A +K+ I+ E + G + G E +E+G+ +P
Sbjct: 940 HHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVG-IERGNIETTSEDGQ--VFSPKK 996
Query: 502 GXXXXXXXXXXXWSLRVYQLQQER*AQTRKEAKG 603
G S + E AQ K+ +G
Sbjct: 997 GQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRG 1030
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +1
Query: 322 HEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 501
H Q+ + D EN+K A +K+ I+ E + G + G E +E+G+ +P
Sbjct: 940 HHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVG-IERGNIETTSEDGQ--VFSPKK 996
Query: 502 GXXXXXXXXXXXWSLRVYQLQQER*AQTRKEAKG 603
G S + E AQ K+ +G
Sbjct: 997 GQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRG 1030
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +1
Query: 322 HEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 501
H Q+ + D EN+K A +K+ I+ E + G + G E +E+G+ +P
Sbjct: 940 HHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVG-IERGNIETTSEDGQ--VFSPKK 996
Query: 502 GXXXXXXXXXXXWSLRVYQLQQER*AQTRKEAKG 603
G S + E AQ K+ +G
Sbjct: 997 GQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRG 1030
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +1
Query: 322 HEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 501
H Q+ + D EN+K A +K+ I+ E + G + G E +E+G+ +P
Sbjct: 940 HHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVG-IERGNIETTSEDGQ--VFSPKK 996
Query: 502 GXXXXXXXXXXXWSLRVYQLQQER*AQTRKEAKG 603
G S + E AQ K+ +G
Sbjct: 997 GQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRG 1030
>AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein.
Length = 967
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +1
Query: 322 HEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 501
H Q+ + D EN+K A +K+ I+ E + G + G E +E+G+ +P
Sbjct: 239 HHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVG-IERGNIETTSEDGQ--VFSPKK 295
Query: 502 GXXXXXXXXXXXWSLRVYQLQQER*AQTRKEAKG 603
G S + E AQ K+ +G
Sbjct: 296 GQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRG 329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,153,468
Number of Sequences: 237096
Number of extensions: 1693042
Number of successful extensions: 6504
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 5681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6457
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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