Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_D03
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 60 2e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 58 1e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 48 7e-06
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 48 7e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 48 9e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 48 9e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 48 9e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 40 0.002
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 39 0.006
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 39 0.006
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 39 0.006
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 39 0.006
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 38 0.010
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 38 0.010
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.013
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 37 0.017
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 37 0.017
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 37 0.017
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.039
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 36 0.039
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 36 0.039
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 36 0.039
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 36 0.039
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 36 0.052
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.052
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.052
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.052
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.052
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 36 0.052
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 35 0.069
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.16
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 33 0.21
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 33 0.37
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 33 0.37
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.37
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 1.5
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 30 2.0
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 30 2.0
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 30 2.0
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 30 2.6
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 30 2.6
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 3.4
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81487-3|CAB03997.2| 345|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 6.0
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 29 6.0
U41995-10|AAA83466.1| 266|Caenorhabditis elegans Hypothetical p... 28 7.9
L07143-1|AAB37089.2| 532|Caenorhabditis elegans P granule abnor... 28 7.9
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 7.9
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 7.9
AB120730-1|BAC87887.1| 532|Caenorhabditis elegans PGL-2 protein. 28 7.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 75.4 bits (177), Expect = 5e-14
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
P LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARD E GV I +ATP
Sbjct: 203 PAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATP 260
Score = 68.1 bits (159), Expect = 8e-12
Identities = 27/44 (61%), Positives = 38/44 (86%)
Frame = +3
Query: 567 WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 698
WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP
Sbjct: 160 WPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGP 203
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/82 (30%), Positives = 47/82 (57%)
Frame = +2
Query: 314 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 493
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 494 FPDYVQQGVKTMGYKEPTPIQA 559
P + + + +++PT IQ+
Sbjct: 137 LPGQIHE-LLYGKFQKPTVIQS 157
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 698
P + P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP
Sbjct: 290 PIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGP 339
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +2
Query: 326 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 505
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 506 VQQGVKTMGYKEPTPIQAQGL 568
+ + ++ Y++PTPIQA +
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAI 296
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXE-XGVKIXIATP 870
P+A+++ PTRELA Q+ Q A F + C +GG K Q+ + + G ++ + TP
Sbjct: 339 PVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTP 397
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 698
P MSG++++G+A+TGSGKTLA++LP HI +QP + GDGP
Sbjct: 336 PSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGP 378
Score = 48.0 bits (109), Expect = 9e-06
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
PIA++LAPTRELA Q + A F ++ C +GG Q D + G +I + TP
Sbjct: 378 PIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTP 435
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 314 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 490
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 491 NFPDYVQQGVKTMGYKEPTPIQAQGL 568
+ +K Y +PT IQAQ +
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAI 335
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/41 (53%), Positives = 35/41 (85%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 671
P + + WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q
Sbjct: 109 PIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
P LVL+PTRELAQQI+ + + Y ++ C++GG + Q GV+I IATP
Sbjct: 164 PFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATP 220
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 55.2 bits (127), Expect = 6e-08
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
P A+++APTRELAQQI++ FG ++ V GGA + Q GV++ IATP
Sbjct: 379 PYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATP 436
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 419 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGL 568
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAI 332
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCFGLGAY 722
P + + PI + ++++GVA+TGSGKT A++LP +V I + P + R + D LG Y
Sbjct: 326 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRD---LGPY 380
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Frame = +3
Query: 555 KLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPDCFGL 713
+++G P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP FGL
Sbjct: 217 QIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGP--FGL 270
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKRXQARDXEXGVKI 855
P L++ P+RELA+QI + + G C+ GG P QA+D G+ I
Sbjct: 267 PFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI-GGVPIGEQAKDVRDGIHI 325
Query: 856 XIATP 870
+ATP
Sbjct: 326 VVATP 330
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
ALV+APTRELAQQIQ+V + G V GG R R E G+ + + TP
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTP 155
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 582 SGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 677
+GK+++ AQ+G+GKT + + + I+++ P
Sbjct: 65 TGKDVIAQAQSGTGKTATFSVSILQRIDHEDP 96
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
ALV+APTRELAQQIQ+V + G V GG R R E G+ + + TP
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTP 155
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 582 SGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 677
+GK+++ AQ+G+GKT + + + I+++ P
Sbjct: 65 TGKDVIAQAQSGTGKTATFSVSILQRIDHEDP 96
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-RXQARDXEXGVKIXIATP 870
P ALVL+PTRELA QI + A F + S ++ ++GG R Q G I IATP
Sbjct: 223 PCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATP 281
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 413 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGL 568
++Y N V VSG V I++F EA F V + V GY +PTP+Q +
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSI 170
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 662
P + P ++ ++L+ AQTGSGKT A++LP I HI
Sbjct: 164 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-RXQARDXEXGVKIXIATP 870
P ALVL+PTRELA QI + A F + S ++ ++GG R Q G I IATP
Sbjct: 207 PCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATP 265
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 413 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGL 568
++Y N V VSG V I++F EA F V + V GY +PTP+Q +
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSI 154
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 662
P + P ++ ++L+ AQTGSGKT A++LP I HI
Sbjct: 148 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-RXQARDXEXGVKIXIATP 870
P ALVL+PTRELA QI + A F + S ++ ++GG R Q G I IATP
Sbjct: 204 PCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATP 262
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 413 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGL 568
++Y N V VSG V I++F EA F V + V GY +PTP+Q +
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSI 151
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 662
P + P ++ ++L+ AQTGSGKT A++LP I HI
Sbjct: 145 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 437 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 556
V +G +V PI F + + +++++ +KT GY PTP+Q
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQ 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-RXQARDXEXGVKIXIATP 870
P ALVL+PTREL+ QI + F + + + + ++GG + Q G I IATP
Sbjct: 251 PSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATP 309
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 677
P G++L+ AQTGSGKT A+++P + I P
Sbjct: 198 PALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGP 233
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 674
P A+ GK+++G+A+TGSGKT A+ +P + + + P
Sbjct: 76 PHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP 110
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +1
Query: 706 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
LVL PTRELA QI Q G + + GG QA I +ATP
Sbjct: 116 LVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATP 170
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P+ GK+++ AQTGSGKT A++LP + + + + G C+
Sbjct: 330 PLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTRELA QI F + S + V+GG G I + T
Sbjct: 376 PRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGT 432
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P+ GK+++ AQTGSGKT A++LP + + + + G C+
Sbjct: 330 PLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTRELA QI F + S + V+GG G I + T
Sbjct: 376 PRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGT 432
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 38.7 bits (86), Expect = 0.006
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 653
P + K P M GK++V +++TGSGKT A+++P +
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPML 83
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
AL+++PTRELA Q +V + G + +R C+ GG Q I +ATP
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATP 151
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 38.7 bits (86), Expect = 0.006
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 653
P + K P M GK++V +++TGSGKT A+++P +
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPML 83
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
AL+++PTRELA Q +V + G + +R C+ GG Q I +ATP
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATP 151
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 477 TLKKQIFLIMCNKV*RQWVT---KNRRPFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILP 647
T KK L +C+ + +Q T K P + P + G +++G A+TG+GKTLA+ +P
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIP 146
Query: 648 AIVHINNQP 674
+ ++ P
Sbjct: 147 ILQKLSVDP 155
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
AL+L PTRELA QI + G ++ + + GG QAR+ + +ATP
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATP 215
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 477 TLKKQIFLIMCNKV*RQWVT---KNRRPFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILP 647
T KK L +C+ + +Q T K P + P + G +++G A+TG+GKTLA+ +P
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIP 146
Query: 648 AIVHINNQP 674
+ ++ P
Sbjct: 147 ILQKLSVDP 155
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
AL+L PTRELA QI + G ++ + + GG QAR+ + +ATP
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATP 215
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 674
P+A++GK++ A TG+GKT A++LP + + +P
Sbjct: 180 PVALTGKDICACAATGTGKTAAFVLPILERMIYRP 214
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 706 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
LVL PTRELA Q+ QV + GG + Q G + +ATP
Sbjct: 223 LVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATP 277
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +3
Query: 579 MSGKNLVGVAQTGSGKTLAYILPAI 653
+ GK+++ A+TGSGKTLA++LPAI
Sbjct: 103 LEGKDVLASAKTGSGKTLAFLLPAI 127
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 706 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
++++PTREL+ Q V ++ S + V GG+ + + GV I +ATP
Sbjct: 144 IIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
AL+L+PTRELA QIQ+V G V+ GG R + G + TP
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTP 152
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
AL+L+PTRELA QIQ+V G V+ GG R + G + TP
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTP 152
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 662
P +++ P +N++ A TGSGKTLA+ LP I I
Sbjct: 151 PIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.039
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P+ G +++ AQTGSGKT A++LP + + ++ + C+
Sbjct: 584 PLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTREL QI F + + + V+GG E G I + T
Sbjct: 630 PRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.039
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P+ G +++ AQTGSGKT A++LP + + ++ + C+
Sbjct: 584 PLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTREL QI F + + + V+GG E G I + T
Sbjct: 630 PRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 35.9 bits (79), Expect = 0.039
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 576 AMSGKNLVGVAQTGSGKTLAYILPAI 653
+++G ++VG A+TGSGKTLA ++P +
Sbjct: 110 SLTGSDVVGAAKTGSGKTLALVIPVL 135
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.039
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P+ G +++ AQTGSGKT A++LP + + ++ + C+
Sbjct: 584 PLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTREL QI F + + + V+GG E G I + T
Sbjct: 630 PRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.052
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P+AL+LAPTRELA QI + + + + +G + + + G I I T
Sbjct: 460 PLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGT 516
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P + P+ G +++ AQTGSGKT A++LP + + + + C+
Sbjct: 366 PIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Score = 34.7 bits (76), Expect = 0.091
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTRELA QI F + + + V+GG E G I + T
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGT 475
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 467 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGL 568
P + F EAN + +Q+ V GY + TPIQ L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYAL 372
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P + P+ G +++ AQTGSGKT A++LP + + + + C+
Sbjct: 366 PIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Score = 34.7 bits (76), Expect = 0.091
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTRELA QI F + + + V+GG E G I + T
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGT 475
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 467 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGL 568
P + F EAN + +Q+ V GY + TPIQ L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYAL 372
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3
Query: 567 WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 662
+PI M G ++V A TGSGKTLA+++P ++ +
Sbjct: 768 FPI-MHGNDVVACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3
Query: 567 WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 662
+PI M G ++V A TGSGKTLA+++P ++ +
Sbjct: 768 FPI-MHGNDVVACAHTGSGKTLAFLIPFVIKL 798
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPDCF 707
P + P+ G +++ AQTGSGKT A++LP + + + + C+
Sbjct: 366 PIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Score = 34.7 bits (76), Expect = 0.091
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 697 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIAT 867
P ++L PTRELA QI F + + + V+GG E G I + T
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGT 475
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 467 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGL 568
P + F EAN + +Q+ V GY + TPIQ L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYAL 372
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 35.1 bits (77), Expect = 0.069
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +3
Query: 573 IAMSGKNLVGVAQTGSGKTLAYILPAI 653
+A+ KN++G A+TGSGKT A+++P +
Sbjct: 122 LALENKNIMGRARTGSGKTGAFLIPLV 148
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 576 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 671
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXEXGVKIXIATP 870
A+V+ PTRELA Q Q+ + ++ GG R V + IATP
Sbjct: 114 AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATP 169
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 685 EVMVPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQAR-DXEXGVKIXI 861
EV P AL++APTREL QI + T+ + T + GG + Q R + I +
Sbjct: 65 EVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVV 124
Query: 862 ATP 870
ATP
Sbjct: 125 ATP 127
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 588 KNLVGVAQTGSGKTLAYILPAIVHI 662
++++G A+TGSGKTLA+ +P + +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARL 51
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 685 EVMVPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQAR-DXEXGVKIXI 861
EV P AL++APTREL QI + T+ + T + GG + Q R + I +
Sbjct: 232 EVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVV 291
Query: 862 ATP 870
ATP
Sbjct: 292 ATP 294
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 588 KNLVGVAQTGSGKTLAYILPAIVHI 662
++++G A+TGSGKTLA+ +P + +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARL 218
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 570 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 674
P + +++ A TGSGKT+ Y+LP + + ++P
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 531 VTKN-RRPFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 653
VTK +R + + G+ LV A TG GKT A+++PAI
Sbjct: 11 VTKTVKRRVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 573 IAMSGKNLVGVAQTGSGKTLAYILPAI 653
+ G+ LV A TG GKT A+++PAI
Sbjct: 126 VIREGRGLVVEAPTGIGKTYAFLIPAI 152
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/41 (24%), Positives = 29/41 (70%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 671
P + + P+ + G++++ A++G+GKTL + + A+ +++++
Sbjct: 47 PVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSR 87
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/41 (24%), Positives = 29/41 (70%)
Frame = +3
Query: 549 PFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 671
P + + P+ + G++++ A++G+GKTL + + A+ +++++
Sbjct: 47 PVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSR 87
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 546 RPFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 656
RP + MS ++ V + TG GK+L Y LPA++
Sbjct: 88 RPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 546 RPFKLKGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 656
RP + MS ++ V + TG GK+L Y LPA++
Sbjct: 111 RPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 180 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 296
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 506 VQQGVKTMGYKEPTPIQAQGLADSYVWKE 592
V++G+K+MG E +PI LAD Y +E
Sbjct: 150 VRKGLKSMGVDENSPIVEMSLADGYFKEE 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 506 VQQGVKTMGYKEPTPIQAQGLADSYVWKE 592
V++G+K+MG E +PI LAD Y +E
Sbjct: 109 VRKGLKSMGVDENSPIVEMSLADGYFKEE 137
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 612 TGSGKTLAYILPAIVH 659
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 591 NLVGVAQTGSGKTLAYILPAIVHINN 668
++V + TGSGKTLA++LP + I N
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQN 73
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 703 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDXE-XGVKIXIATP 870
AL+L+P+REL QI V F + V GG + + V I +ATP
Sbjct: 83 ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATP 139
>Z81487-3|CAB03997.2| 345|Caenorhabditis elegans Hypothetical
protein C54E10.4 protein.
Length = 345
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 610 WATPTKFFPDIAIGQPLSLNGRRFFVTHCLYTLLHIIRKICF 485
W P+ FF +A G L N RRF TH T+ I CF
Sbjct: 65 WICPSYFFFPLAGGYILEENFRRFVSTHASLTIWVFI--FCF 104
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 235 RRIIAEFVASSKFGTTVSTAIIPV 164
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 235 RRIIAEFVASSKFGTTVSTAIIPV 164
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 591 NLVGVAQTGSGKTLAYILPAIVHIN 665
NL+ AQ+G+GKT A++L + I+
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRID 274
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 673 RLFGEVMVPIALVLAPTRELAQQIQQVAADFG 768
R+ +M P + LAPT ELA+QI +V G
Sbjct: 272 RIDVNLMCPQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 591 NLVGVAQTGSGKTLAYILPAIVHIN 665
NL+ AQ+G+GKT A++L + I+
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRID 299
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 673 RLFGEVMVPIALVLAPTRELAQQIQQVAADFG 768
R+ +M P + LAPT ELA+QI +V G
Sbjct: 297 RIDVNLMCPQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 591 NLVGVAQTGSGKTLAYILPAIVHIN 665
NL+ AQ+G+GKT A++L + I+
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRID 683
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 673 RLFGEVMVPIALVLAPTRELAQQIQQVAADFG 768
R+ +M P + LAPT ELA+QI +V G
Sbjct: 681 RIDVNLMCPQCICLAPTLELAKQIGEVVEKMG 712
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 94 PASXXIHSLNKHLQLNPKNNHVW 162
PAS +H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>U41995-10|AAA83466.1| 266|Caenorhabditis elegans Hypothetical
protein E02C12.9 protein.
Length = 266
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 867 SSNXYF--YSXLXVPGLXSFRSTTKHTRVTNIRCVSKI 760
S N YF + L VPG+ SF + T+ T I +SKI
Sbjct: 205 SYNLYFPMAAILIVPGMISFMTNTQITEAERIHSMSKI 242
>L07143-1|AAB37089.2| 532|Caenorhabditis elegans P granule
abnormality protein 2 protein.
Length = 532
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 398 SPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGLADS 577
S E+ E N E+ V+ VEV + F + D++ ++ EPT + G+++S
Sbjct: 413 SSVELTELINSIEIAVTSVEVEDQTVNFRKIPQKDWLDGNLQKALKTEPTS-EKFGISNS 471
Query: 578 YVWKEFSWRSP-NGFRQN 628
K+ + R+ GF+ N
Sbjct: 472 LKIKDENQRNQIRGFKDN 489
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 573 IAMSGKNLVGVAQTGSGKTL 632
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 573 IAMSGKNLVGVAQTGSGKTL 632
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AB120730-1|BAC87887.1| 532|Caenorhabditis elegans PGL-2 protein.
Length = 532
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 398 SPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGLADS 577
S E+ E N E+ V+ VEV + F + D++ ++ EPT + G+++S
Sbjct: 413 SSVELTELINSIEIAVTSVEVEDQTVNFRKIPQKDWLDGNLQKALKTEPTS-EKFGISNS 471
Query: 578 YVWKEFSWRSP-NGFRQN 628
K+ + R+ GF+ N
Sbjct: 472 LKIKDENQRNQIRGFKDN 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,157,195
Number of Sequences: 27780
Number of extensions: 392721
Number of successful extensions: 1155
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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