Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_D02
         (948 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069099-1|AAL39244.1|  562|Drosophila melanogaster GH11670p pro...    30   5.3  
AE014296-1574|AAF50325.2|  562|Drosophila melanogaster CG32031-P...    30   5.3  

>AY069099-1|AAL39244.1|  562|Drosophila melanogaster GH11670p
           protein.
          Length = 562

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
 Frame = -2

Query: 623 SXPXXXPXXSPXXXXTXLSPAXPXXXPXPNXXXXXTVPLAXAXXPPXKXQXAXXPKXAPI 444
           S P   P  +P       +P      P P       VP+      P K + A  PK  P+
Sbjct: 45  SAPAPAPAPTPKPAVVPPAPKPDPPKPAPAVAKPTPVPVPATAPAPPKEEPAPKPKPEPV 104

Query: 443 XXXLI--PXRXPNLSXPKXTP 387
              ++  P   P  + P   P
Sbjct: 105 PSPVVAPPKPTPPPAKPSSPP 125


>AE014296-1574|AAF50325.2|  562|Drosophila melanogaster CG32031-PA,
           isoform A protein.
          Length = 562

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
 Frame = -2

Query: 623 SXPXXXPXXSPXXXXTXLSPAXPXXXPXPNXXXXXTVPLAXAXXPPXKXQXAXXPKXAPI 444
           S P   P  +P       +P      P P       VP+      P K + A  PK  P+
Sbjct: 45  SAPAPAPAPTPKPAVVPPAPKPDPPKPAPAVAKPTPVPVPATAPAPPKEEPAPKPKPEPV 104

Query: 443 XXXLI--PXRXPNLSXPKXTP 387
              ++  P   P  + P   P
Sbjct: 105 PSPVVAPPKPTPPPAKPSSPP 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.142    0.451 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,399,479
Number of Sequences: 53049
Number of extensions: 83545
Number of successful extensions: 241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4710216690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)