Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_D01
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.054
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.054
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.054
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.10
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.10
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.10
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 5.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 5.3
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 28 8.2
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 28 8.2
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 28 8.2
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 8.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.054
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP K G PPPP P PPPP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPPXXXXXXXPXXXXXXXXXXXGG 839
PPPP K G PPP P PPPP P G
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 840 XAPXXP 857
P P
Sbjct: 297 PPPPPP 302
Score = 31.5 bits (68), Expect = 0.88
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = +2
Query: 464 APPXPPPQXGGXXXLXGGGXXXPPXXGXXXXPXXXGKXXKKXXXXRAXXXPXTXKXXXXX 643
+PP PPP G L G G PP P G P
Sbjct: 236 SPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPP----TGSPPPPPAGGSPP 290
Query: 644 XXXXXXPPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXPXXPP 772
PPP + P PPP P PP
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPP 770
PPPP G PPPP P PP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.054
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP K G PPPP P PPPP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPPXXXXXXXPXXXXXXXXXXXGG 839
PPPP K G PPP P PPPP P G
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 840 XAPXXP 857
P P
Sbjct: 318 PPPPPP 323
Score = 31.5 bits (68), Expect = 0.88
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = +2
Query: 464 APPXPPPQXGGXXXLXGGGXXXPPXXGXXXXPXXXGKXXKKXXXXRAXXXPXTXKXXXXX 643
+PP PPP G L G G PP P G P
Sbjct: 257 SPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPP----TGSPPPPPAGGSPP 311
Query: 644 XXXXXXPPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXPXXPP 772
PPP + P PPP P PP
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPP 770
PPPP G PPPP P PP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.054
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP K G PPPP P PPPP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPPXXXXXXXPXXXXXXXXXXXGG 839
PPPP K G PPP P PPPP P G
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 840 XAPXXP 857
P P
Sbjct: 303 PPPPPP 308
Score = 31.5 bits (68), Expect = 0.88
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = +2
Query: 464 APPXPPPQXGGXXXLXGGGXXXPPXXGXXXXPXXXGKXXKKXXXXRAXXXPXTXKXXXXX 643
+PP PPP G L G G PP P G P
Sbjct: 242 SPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPP----TGSPPPPPAGGSPP 296
Query: 644 XXXXXXPPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXPXXPP 772
PPP + P PPP P PP
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPP 770
PPPP G PPPP P PP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPPXXXXXXXPXXXXXXXXXXXGG 839
PPPP G PPPP P PPPP P GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 840 XAPXXP 857
P P
Sbjct: 784 PPPPPP 789
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 470 PXPPPQXGGXXXLXGGGXXXPPXXGXXXXP 559
P PPP GG + GG PP G P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.3 bits (60), Expect(2) = 0.10
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 470 PXPPPQXGGXXXLXGGGXXXPPXXG 544
P PPP GG + GG PP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 25.0 bits (52), Expect(2) = 0.10
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +2
Query: 662 PPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXP 760
PPP P PPPP K P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPPXXXXXXXPXXXXXXXXXXXGG 839
PPPP G PPPP P PPPP P GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 840 XAPXXP 857
P P
Sbjct: 784 PPPPPP 789
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 470 PXPPPQXGGXXXLXGGGXXXPPXXGXXXXP 559
P PPP GG + GG PP G P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.3 bits (60), Expect(2) = 0.10
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 470 PXPPPQXGGXXXLXGGGXXXPPXXG 544
P PPP GG + GG PP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 25.0 bits (52), Expect(2) = 0.10
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +2
Query: 662 PPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXP 760
PPP P PPPP K P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPPXXXXXXXPXXXXXXXXXXXGG 839
PPPP G PPPP P PPPP P GG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 840 XAPXXP 857
P P
Sbjct: 367 PPPPPP 372
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 470 PXPPPQXGGXXXLXGGGXXXPPXXGXXXXP 559
P PPP GG + GG PP G P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 28.3 bits (60), Expect(2) = 0.10
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 470 PXPPPQXGGXXXLXGGGXXXPPXXG 544
P PPP GG + GG PP G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 25.0 bits (52), Expect(2) = 0.10
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +2
Query: 662 PPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXP 760
PPP P PPPP K P P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP + G PPP P PPPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP + G PPPP + PPPP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 467 PPXPPPQXGGXXXLXGGGXXXPPXXG 544
PP PPP G + GG PP G
Sbjct: 317 PPPPPPSRFGPPGM--GGMPPPPPPG 340
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 12/39 (30%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Frame = +2
Query: 662 PPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXX-PXXPPP 775
PPP + P PPPP P PPP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +2
Query: 662 PPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXPXXPPPXXXP 787
PPP +K + PPPP P P PP P
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPP 165
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP + G PPP P PPPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP + G PPPP + PPPP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 467 PPXPPPQXGGXXXLXGGGXXXPPXXG 544
PP PPP G + GG PP G
Sbjct: 327 PPPPPPSRFGPPGM--GGMPPPPPPG 350
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 12/39 (30%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Frame = +2
Query: 662 PPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXX-PXXPPP 775
PPP + P PPPP P PPP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 543 PXXGGXXXPPPXNXXXPPXXGGGXGG 466
P GG PPP PP GG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 543 PXXGGXXXPPPXNXXXPPXXGGGXGG 466
P GG PPP PP GG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 543 PXXGGXXXPPPXNXXXPPXXGGGXGG 466
P GG PPP PP GG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 543 PXXGGXXXPPPXNXXXPPXXGGGXGG 466
P GG PPP PP GG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 711 PPPPXXXKXXXXPXXXXXPPPP 776
PPPP P PPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPP 633
Score = 22.6 bits (46), Expect(2) = 5.2
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPP 722
PPPP + + PPPP
Sbjct: 558 PPPPTRVESHGLAPARPPPPP 578
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.6 bits (51), Expect(2) = 5.3
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 711 PPPPXXXKXXXXPXXXXXPPPP 776
PPPP P PPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPP 459
Score = 22.6 bits (46), Expect(2) = 5.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPP 722
PPPP + + PPPP
Sbjct: 384 PPPPTRVESHGLAPARPPPPP 404
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 YCLXYSWTFLTDFYNCW 66
+CL WTF T FY C+
Sbjct: 320 FCLFEDWTFFTSFYFCF 336
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 YCLXYSWTFLTDFYNCW 66
+CL WTF T FY C+
Sbjct: 320 FCLFEDWTFFTSFYFCF 336
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 YCLXYSWTFLTDFYNCW 66
+CL WTF T FY C+
Sbjct: 320 FCLFEDWTFFTSFYFCF 336
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 661 PPPXKKKKKXXPXXXXAPPPXXXXXXXXPPXXPXXPPP 774
PPP + + P APPP PP P PPP
Sbjct: 117 PPPPVQYQNQGPQYIEAPPP-----PPSPPPPPPPPPP 149
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 662 PPPXKKKKKXXPXXXXPPPPXXXKXXXXPXXXPXXPPPXXXP 787
PPP P PPP + P P PPP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 464 APPXPPPQXGGXXXLXGGGXXXPP 535
APP PPP GG + G PP
Sbjct: 214 APPAPPPPIGGIAPVNAHGAPPPP 237
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 660 PPPPXKKKKKXXXXXGGPPPPXXXKXXXXPXXXXXPPPP 776
PPPP PPPP K PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +3
Query: 597 KGPXXXXXPXXXXDXXFXXXXPPPPXKKK--KKXXXXXGGPPPPXXXKXXXXPXXXXXPP 770
+GP P PPPP + GGPPP P PP
Sbjct: 1552 RGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPP 1611
Query: 771 PP 776
PP
Sbjct: 1612 PP 1613
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 464 APPXPPPQXGGXXXLXGGGXXXPP 535
APP PPP GG + G PP
Sbjct: 200 APPAPPPPIGGIAPVNAHGAPPPP 223
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 464 APPXPPPQXGGXXXLXGGGXXXPP 535
APP PPP GG + G PP
Sbjct: 200 APPAPPPPIGGIAPVNAHGAPPPP 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.149 0.541
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,490,241
Number of Sequences: 27780
Number of extensions: 196472
Number of successful extensions: 1211
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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