Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C23
         (1108 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         30   3.8  
10_02_0174 - 6202334-6204922                                           29   8.7  
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    29   8.7  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = +2

Query: 563 FPXXPALSPVHXXPPXAXXXXMLXMXXTPPPXPXSPGWXQXPPXXSP 703
           F   PALSPV   PP       +     PPP    P     PP   P
Sbjct: 113 FKTPPALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPP 159


>10_02_0174 - 6202334-6204922
          Length = 862

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 213 LVLLRRWVXXSXACARPPPLITP 145
           L+LL+ W+     C RPPPL  P
Sbjct: 265 LLLLQVWIWERFDCLRPPPLKAP 287


>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +2

Query: 560 PFPXXPALSPVHXXPPXAXXXXMLXMXXTPPPXPXSP 670
           P P  PA S     PP +    +      PPP P SP
Sbjct: 88  PVPVPPAYSVTSSVPPYSMTSSLPPSPRPPPPLPFSP 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,715,022
Number of Sequences: 37544
Number of extensions: 189944
Number of successful extensions: 439
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3328000860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)