Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C15
         (916 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    26   1.4  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    24   7.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   7.4  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 526 EKPYGCELCGAKYKTRAGLTYH 591
           EKPY C++C A++     L  H
Sbjct: 265 EKPYSCDVCFARFTQSNSLKAH 286



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHTH 606
           +KPY C+ C   ++ +  L  H  + H
Sbjct: 380 QKPYKCDQCAQTFRQKQLLKRHMNYYH 406


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 246 LLQSVIHLYCHLHLVHQVSL 187
           LLQ   HL   L+LVHQ  L
Sbjct: 32  LLQQQYHLQAQLNLVHQQQL 51


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 306 HQFPFPPLPVHHKTIPLDHLLLQSVIHL-YCHLH 208
           H  P PP      ++ LDH LL S   L  C LH
Sbjct: 383 HIPPLPPTIAFDPSVLLDHHLLDSSESLNTCRLH 416


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,216
Number of Sequences: 2352
Number of extensions: 11605
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)