Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C15
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 35 0.071
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 35 0.071
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 35 0.071
AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical... 35 0.093
AF003137-2|AAB93641.2| 464|Caenorhabditis elegans Temporarily a... 33 0.38
AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical ... 32 0.50
U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated p... 32 0.66
AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein. 32 0.66
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.87
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 31 0.87
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 31 1.5
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 31 1.5
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 30 2.0
AF101305-8|AAF98599.1| 534|Caenorhabditis elegans Hypothetical ... 30 2.0
Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical pr... 29 3.5
U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein ... 29 3.5
AF003144-4|AAB54197.2| 164|Caenorhabditis elegans Hypothetical ... 29 3.5
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81091-6|CAE17821.2| 306|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z75952-8|CAH10792.1| 306|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z75952-6|CAN86599.1| 145|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z69302-10|CAA93267.1| 295|Caenorhabditis elegans Hypothetical p... 29 4.6
Z47074-3|CAA87376.1| 295|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 29 4.6
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 29 4.6
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 29 4.6
AF008590-1|AAB63299.1| 295|Caenorhabditis elegans paraquat resp... 29 4.6
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 29 6.1
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 6.1
AC024817-38|AAF59578.1| 608|Caenorhabditis elegans Hypothetical... 29 6.1
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 29 6.1
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 28 8.1
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +1
Query: 505 YEVPGDAEKPYGCELCGAKYKTRAGLTYHFTHTH 606
YE P EK Y C+ C AKYK+ AGL+YH ++ H
Sbjct: 204 YEEP--EEKTYPCDKCSAKYKSLAGLSYHQSYLH 235
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 35.1 bits (77), Expect = 0.071
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDPPAR 624
+KP+ C++CG + TR L H TH+ + P+R
Sbjct: 614 DKPFKCDMCGRAFTTRGNLKVHMGTHSWQQSPSR 647
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 35.1 bits (77), Expect = 0.071
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDPPAR 624
+KP+ C++CG + TR L H TH+ + P+R
Sbjct: 585 DKPFKCDMCGRAFTTRGNLKVHMGTHSWQQSPSR 618
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 35.1 bits (77), Expect = 0.071
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDPPAR 624
+KP+ C++CG + TR L H TH+ + P+R
Sbjct: 614 DKPFKCDMCGRAFTTRGNLKVHMGTHSWQQSPSR 647
>AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical
protein Y56A3A.28 protein.
Length = 386
Score = 34.7 bits (76), Expect = 0.093
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYH-FTHTHKDP 615
E+PYGC+ CG +++T + L H HT + P
Sbjct: 234 EQPYGCDYCGKRFRTTSSLKVHKRAHTGEKP 264
>AF003137-2|AAB93641.2| 464|Caenorhabditis elegans Temporarily
assigned gene nameprotein 146 protein.
Length = 464
Score = 32.7 bits (71), Expect = 0.38
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHTH 606
EKPY C++CG ++ R + HF H
Sbjct: 82 EKPYECDICGMRFTQRTPMINHFRVQH 108
>AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical
protein K02D7.2 protein.
Length = 193
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THT 603
EKP+GCE CG + R+ L H TH+
Sbjct: 121 EKPFGCEFCGRCFADRSNLRAHLQTHS 147
>U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated
protein 98 protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 502 PYEVPGDAE-KPYGCELCGAKYKTRAGLTYHFTHTHK 609
P V D KPY CE C Y GL YH ++H+
Sbjct: 234 PLRVYNDVRSKPYICEYCSKSYSDSRGLAYHM-YSHR 269
>AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 502 PYEVPGDAE-KPYGCELCGAKYKTRAGLTYHFTHTHK 609
P V D KPY CE C Y GL YH ++H+
Sbjct: 234 PLRVYNDVRSKPYICEYCSKSYSDSRGLAYHM-YSHR 269
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 31.5 bits (68), Expect = 0.87
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHT 603
E+PY C CG KY + +GL H+ T
Sbjct: 617 ERPYSCGTCGKKYISPSGLRTHWKTT 642
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYH-FTHTHKDP 615
EKP+ CE CG ++ LT H THT P
Sbjct: 193 EKPFKCEHCGRAFRQPGNLTRHRLTHTTVKP 223
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 AEKPYGCELCGAKYKTRAGLTYHFTHTHK 609
A KPY C+ CG + + LT H HK
Sbjct: 89 ALKPYVCKFCGKSSRLKGNLTKHILKHHK 117
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 AEKPYGCELCGAKYKTRAGLTYHFTHTHK 609
A KPY C+ CG + + LT H HK
Sbjct: 72 ALKPYVCKFCGKSSRLKGNLTKHILKHHK 100
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 514 PGDAEKPYGCELCGAKYKTRAGLTYHFTHTHK 609
P Y C C +YKT +GL+ H +H+
Sbjct: 264 PATNTTSYKCTYCSKRYKTSSGLSNHMMSSHQ 295
>AF101305-8|AAF98599.1| 534|Caenorhabditis elegans Hypothetical
protein C04F5.9 protein.
Length = 534
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 502 PYEVPGDAEKPYGCELCGAKYKTRAGLTYHFTH 600
P E+ ++ PY C+LCG ++ + L H+ H
Sbjct: 141 PAEITQNSVVPYVCDLCGFGFRYKKSLYNHWRH 173
>Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical
protein R10H10.2 protein.
Length = 570
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 51 EGQVYTYPAQRWRKARRQYLTMSSTRWGWNRAADLADNTGDGENSSGLPD----ALGGDD 218
+G +Y + ++ R + +S+ W W+R ++ + NSS + D GG +
Sbjct: 290 DGILYLFGGSTGQRTRCETWKLSTETWQWDRCNNMMEPRNYISNSSVVYDGRIYVFGGQN 349
Query: 219 SRDGSQTAAKDDPKEWF 269
R+ ++TA + E F
Sbjct: 350 FREITRTAVRSRTGEVF 366
>U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical
protein T27B1.2 protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 520 DAEKPYGCELCGAKYKTRAGLTYH-FTHTHKDP 615
D ++PY C LC +K+ ++ L H +HT + P
Sbjct: 79 DRKRPYPCNLCSSKFGSKMELEEHQNSHTGQKP 111
>U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein
protein.
Length = 570
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 51 EGQVYTYPAQRWRKARRQYLTMSSTRWGWNRAADLADNTGDGENSSGLPD----ALGGDD 218
+G +Y + ++ R + +S+ W W+R ++ + NSS + D GG +
Sbjct: 290 DGILYLFGGSTGQRTRCETWKLSTETWQWDRCNNMMEPRNYISNSSVVYDGRIYVFGGQN 349
Query: 219 SRDGSQTAAKDDPKEWF 269
R+ ++TA + E F
Sbjct: 350 FREITRTAVRSRTGEVF 366
>AF003144-4|AAB54197.2| 164|Caenorhabditis elegans Hypothetical
protein C55C2.1 protein.
Length = 164
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDP 615
EKP+ CE+C ++ ++ L H TH+ P
Sbjct: 105 EKPFQCEICSKRFADKSNLRAHIQTHSGTKP 135
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 529 KPYGCELCGAKYKTRAGLTYH-FTHTHKDP 615
+PY CE CG ++ ++ + H + HT + P
Sbjct: 180 RPYPCEYCGKRFHQKSDMKKHTYIHTGEKP 209
>Z81091-6|CAE17821.2| 306|Caenorhabditis elegans Hypothetical
protein F55H12.6a protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 514 PGDAEKPYGCELCGAKYKTRAGLTYHFTHTHK 609
P + +P+GC +C + LT H T H+
Sbjct: 238 PFNPARPFGCVICPCSFPRVKDLTIHVTSVHR 269
>Z75952-8|CAH10792.1| 306|Caenorhabditis elegans Hypothetical
protein F55H12.6a protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 514 PGDAEKPYGCELCGAKYKTRAGLTYHFTHTHK 609
P + +P+GC +C + LT H T H+
Sbjct: 238 PFNPARPFGCVICPCSFPRVKDLTIHVTSVHR 269
>Z75952-6|CAN86599.1| 145|Caenorhabditis elegans Hypothetical
protein F55H12.6c protein.
Length = 145
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 514 PGDAEKPYGCELCGAKYKTRAGLTYHFTHTHK 609
P + +P+GC +C + LT H T H+
Sbjct: 77 PFNPARPFGCVICPCSFPRVKDLTIHVTSVHR 108
>Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical
protein F55H12.6b protein.
Length = 286
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 514 PGDAEKPYGCELCGAKYKTRAGLTYHFTHTHK 609
P + +P+GC +C + LT H T H+
Sbjct: 218 PFNPARPFGCVICPCSFPRVKDLTIHVTSVHR 249
>Z69302-10|CAA93267.1| 295|Caenorhabditis elegans Hypothetical
protein F40F8.7 protein.
Length = 295
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHTHKDPPAR 624
E Y C +C Y ++YH T H++PP +
Sbjct: 158 ENGYMCTVCRKVYGRYNSVSYHVTIYHRNPPIK 190
>Z47074-3|CAA87376.1| 295|Caenorhabditis elegans Hypothetical
protein F40F8.7 protein.
Length = 295
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHTHKDPPAR 624
E Y C +C Y ++YH T H++PP +
Sbjct: 158 ENGYMCTVCRKVYGRYNSVSYHVTIYHRNPPIK 190
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 508 EVPGDAEKPYGCELCGAKYKTRAGLTYH 591
EV GDA +P+ C CG ++ + +T+H
Sbjct: 192 EVHGDA-RPFRCFNCGMRFANKTSMTHH 218
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHTHKDPP 618
E PYGC C +++ + L H H D P
Sbjct: 353 ELPYGCGKCDKRFRDNSCLRKHELAAHTDEP 383
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDPPARGQ 630
EKPY C C + LT H THT + P G+
Sbjct: 325 EKPYSCGYCMKSFAQSQALTAHIRTHTKELPYGCGK 360
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 529 KPYGCELCGAKYKTRAGLTYH-FTHTHKDP 615
+PY CE CG ++ ++ + H + HT + P
Sbjct: 180 RPYPCEYCGKRFHQKSDMKKHTYIHTGEKP 209
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 237 SVIHLYCHLHLVHQVSLNC 181
S++HLY H HLV ++L+C
Sbjct: 403 SLLHLYPHQHLVETITLHC 421
>AF008590-1|AAB63299.1| 295|Caenorhabditis elegans paraquat
responsive protein protein.
Length = 295
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHTHKDPPAR 624
E Y C +C Y ++YH T H++PP +
Sbjct: 158 ENGYMCTVCRKVYGRYNSVSYHVTIYHRNPPIK 190
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 157 QIIRVMEKT--VQAYLMH*VEMTVEMDHRL-QQKMIQRNGFMMNWQWRKWKLVKSLKLSQ 327
+ + ME+ VQ L H +TVE++ +L QQK+++ + WQ +++K +
Sbjct: 852 EFVHKMEEVEHVQEQLKH---LTVELEEKLEQQKLVKVTEHIQMWQEEMIEIIKMFDSTP 908
Query: 328 MKII 339
MK +
Sbjct: 909 MKTV 912
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYH-FTHTHKDP 615
EKPY C C + +A L H THT + P
Sbjct: 129 EKPYNCHFCQKTFAQKATLQVHERTHTGERP 159
>AC024817-38|AAF59578.1| 608|Caenorhabditis elegans Hypothetical
protein Y54G2A.20 protein.
Length = 608
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 535 YGCELCGAKYKTRAGLTYHFTHTHKD 612
Y C C KY ++A + H+ H D
Sbjct: 59 YACNDCNGKYSSKASVLNHYRRAHPD 84
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHFTHTHKDPP 618
E+PY C++CG ++ + L H KD P
Sbjct: 149 ERPYSCDVCGKAFRRQDHLRDHKYIHQKDRP 179
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 532 PYGCELCGAKYKTRAGLTYHFTHTHK 609
PY C LC Y T L H T H+
Sbjct: 470 PYTCHLCDRTYTTGFALGRHLTRQHR 495
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 520 DAEKPYGCELCGAKYKTRAGLTYHF-THTHKDP 615
++ K + CE+CG ++ LT H HT + P
Sbjct: 47 NSRKKFPCEICGKQFNAHYNLTRHMPVHTGERP 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,253,880
Number of Sequences: 27780
Number of extensions: 260679
Number of successful extensions: 941
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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