Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C15
(916 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 34 0.002
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 29 0.078
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 27 0.24
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 25 0.73
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 24 2.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.8
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.002
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 520 DAEKPYGCELCGAKYKTRAGLTYHF-THTHKDP 615
+ E PY C +CG + A LT H+ THT + P
Sbjct: 87 EGEDPYRCNICGKTFAVPARLTRHYRTHTGEKP 119
Score = 29.1 bits (62), Expect = 0.059
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYH-FTHTHKDP 615
EKPY CE C + + L+ H HT + P
Sbjct: 117 EKPYQCEYCSKSFSVKENLSVHRRIHTKERP 147
Score = 27.9 bits (59), Expect = 0.14
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDP 615
EKPY C+ CG + L H THT + P
Sbjct: 201 EKPYVCKACGKGFTCSKQLKVHTRTHTGEKP 231
Score = 25.4 bits (53), Expect = 0.73
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYH 591
EKPY C++CG + L H
Sbjct: 229 EKPYTCDICGKSFGYNHVLKLH 250
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 505 YEVPGDAEKPYGCELCGAKYKTRAGLTYHFTHTHKDPPARG 627
++V EK Y C LC + ++ + H TH D G
Sbjct: 250 HQVAHYGEKVYKCTLCHETFGSKKTMELHI-KTHSDSSVVG 289
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDP 615
E+PY C++C ++ L H HT + P
Sbjct: 145 ERPYKCDVCERAFEHSGKLHRHMRIHTGERP 175
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 28.7 bits (61), Expect = 0.078
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 535 YGCELCGAKYKTRAGLTYHFTHTHK 609
Y CE C +Y+T+ LT H + H+
Sbjct: 36 YVCEFCNRRYRTKNSLTTHKSLQHR 60
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 27.1 bits (57), Expect = 0.24
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 526 EKPYGCELCGAK 561
E+PY CELC AK
Sbjct: 63 ERPYACELCAAK 74
Score = 25.4 bits (53), Expect = 0.73
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 526 EKPYGCELCGAKYKTRAGLTYHF-THTHKDPPA 621
EKPY C C ++ A L H HT + P A
Sbjct: 35 EKPYHCSHCDRQFVQVANLRRHLRVHTGERPYA 67
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 25.4 bits (53), Expect = 0.73
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 523 AEKPYGCELCGAKYKTRAGLTYHFTHTHKD 612
A+K + C+LCG ++A L H H +
Sbjct: 2 AKKLFTCQLCGKVLCSKASLKRHVADKHAE 31
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 520 DAEKPYGCELCGAKYKTRAGLTYHFTHTHKDPP 618
+ ++ Y C +C Y +R L H HK P
Sbjct: 31 ERQEEYRCVICERVYCSRNSLMTHIYTYHKSRP 63
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 535 YGCELCGAKYKTRAGLTYHFTHTHKDP 615
Y C++CG T+ L H H P
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQP 398
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 309 LHQFPFPPLPVH 274
+H P PPLP+H
Sbjct: 436 IHGPPLPPLPLH 447
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 309 LHQFPFPPLPVH 274
+H P PPLP+H
Sbjct: 436 IHGPPLPPLPLH 447
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,488
Number of Sequences: 438
Number of extensions: 3236
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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