Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C14
         (859 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118916-1|AAM50776.1|  356|Drosophila melanogaster LD22010p pro...   237   2e-62
AE014296-815|AAF47877.3|  356|Drosophila melanogaster CG11583-PA...   237   2e-62
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P...    29   8.2  

>AY118916-1|AAM50776.1|  356|Drosophila melanogaster LD22010p
           protein.
          Length = 356

 Score =  237 bits (579), Expect = 2e-62
 Identities = 110/156 (70%), Positives = 127/156 (81%), Gaps = 2/156 (1%)
 Frame = +2

Query: 227 RMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVV 406
           R S D  PK+ KW+N+QRVLVF+ RGI+HR RHLM+DIK LMPHH+ ESKMERSK L VV
Sbjct: 31  RSSDDVVPKKEKWVNKQRVLVFSARGISHRDRHLMKDIKTLMPHHRPESKMERSKTLSVV 90

Query: 407 NEISEMKNCNKCILFEGRKMRDLYMWISNI--PNGPSAKFLVENIYTMGELKMTGNCLRG 580
           NE+ EMK+CNK +LFEGR+ RDLYMWISN     GPSAKFL+ENI+TM ELKMTGNCLRG
Sbjct: 91  NEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTGPSAKFLIENIHTMAELKMTGNCLRG 150

Query: 581 SRPLLSFDPQFTKDPHYCLLKELLVQIFGVPNYHSK 688
           SRPLLSFD +F + PH  LLKEL VQ + VPN+H K
Sbjct: 151 SRPLLSFDSKFDELPHLKLLKELFVQTYSVPNHHPK 186



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +3

Query: 684 PKSQPFFDHVYTFMVLDXRIWXRNYQ 761
           PKSQPF DHV+TF  LD RIW RN+Q
Sbjct: 185 PKSQPFVDHVFTFTYLDKRIWFRNFQ 210



 Score = 33.5 bits (73), Expect = 0.38
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 760 RILSEDGALXEIGPRFVLXSCQDXSGXF 843
           +ILSEDG L E+GPR+V+   +   G F
Sbjct: 210 QILSEDGGLSEVGPRYVMNPVKIFDGSF 237


>AE014296-815|AAF47877.3|  356|Drosophila melanogaster CG11583-PA
           protein.
          Length = 356

 Score =  237 bits (579), Expect = 2e-62
 Identities = 110/156 (70%), Positives = 127/156 (81%), Gaps = 2/156 (1%)
 Frame = +2

Query: 227 RMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVV 406
           R S D  PK+ KW+N+QRVLVF+ RGI+HR RHLM+DIK LMPHH+ ESKMERSK L VV
Sbjct: 31  RSSDDVVPKKEKWVNKQRVLVFSARGISHRDRHLMKDIKTLMPHHRPESKMERSKTLSVV 90

Query: 407 NEISEMKNCNKCILFEGRKMRDLYMWISNI--PNGPSAKFLVENIYTMGELKMTGNCLRG 580
           NE+ EMK+CNK +LFEGR+ RDLYMWISN     GPSAKFL+ENI+TM ELKMTGNCLRG
Sbjct: 91  NEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTGPSAKFLIENIHTMAELKMTGNCLRG 150

Query: 581 SRPLLSFDPQFTKDPHYCLLKELLVQIFGVPNYHSK 688
           SRPLLSFD +F + PH  LLKEL VQ + VPN+H K
Sbjct: 151 SRPLLSFDSKFDELPHLKLLKELFVQTYSVPNHHPK 186



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +3

Query: 684 PKSQPFFDHVYTFMVLDXRIWXRNYQ 761
           PKSQPF DHV+TF  LD RIW RN+Q
Sbjct: 185 PKSQPFVDHVFTFTYLDKRIWFRNFQ 210



 Score = 33.5 bits (73), Expect = 0.38
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 760 RILSEDGALXEIGPRFVLXSCQDXSGXF 843
           +ILSEDG L E+GPR+V+   +   G F
Sbjct: 210 QILSEDGGLSEVGPRYVMNPVKIFDGSF 237


>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
            protein.
          Length = 2282

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +2

Query: 311  HRHRHLMEDIKKL--MPHHKTESKMERSKNLYVVNEISEMKNCNKC 442
            +RHR L  D++K   +P +++  +  +S N Y +++I E + CN C
Sbjct: 1826 YRHRVLFTDLRKCKKIPKNRSRQRSGKSDN-YYIDQI-ENRICNSC 1869


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,224,677
Number of Sequences: 53049
Number of extensions: 743381
Number of successful extensions: 1433
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)