Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C14
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14331-4|AAA28097.1| 352|Caenorhabditis elegans Hypothetical pr... 181 5e-46
Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical pr... 32 0.45
U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein. 30 2.4
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 29 4.2
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 29 5.6
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 29 5.6
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 29 5.6
U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF099922-6|AAK21408.1| 115|Caenorhabditis elegans Hypothetical ... 28 9.8
>L14331-4|AAA28097.1| 352|Caenorhabditis elegans Hypothetical
protein K12H4.3 protein.
Length = 352
Score = 181 bits (441), Expect = 5e-46
Identities = 81/157 (51%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
Frame = +2
Query: 221 QXRMSSDPAPKQVK-WINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNL 397
Q + +++ K+ + W NR+RVLV RG + R R+LM+DIK L+PH K +SK+++ K+L
Sbjct: 44 QPKQATEETRKRAELWTNRERVLVLCSRGADVRTRYLMKDIKDLLPHAKGDSKLDQQKSL 103
Query: 398 YVVNEISEMKNCNKCILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGELKMTGNCLR 577
V+NEI+EMKNC K + FE RK +D Y+W+SN+ GPS KFLV N++TM ELKM+GNCLR
Sbjct: 104 NVLNEIAEMKNCTKVMYFESRKRKDTYLWMSNVEKGPSIKFLVHNVHTMKELKMSGNCLR 163
Query: 578 GSRPLLSFDPQFTKDPHYCLLKELLVQIFGVPNYHSK 688
SRP+LSFD F K P L+K +L+Q G P++H +
Sbjct: 164 ASRPVLSFDDAFDKKPQLKLIKAVLMQTLGTPHHHPR 200
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 684 PKSQPFFDHVYTFMVLD-XRIWXRNYQ 761
P+SQPF DHV+ F V + +IW RN+Q
Sbjct: 199 PRSQPFVDHVFNFSVGEGDKIWFRNFQ 225
>Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical
protein ZK795.3 protein.
Length = 292
Score = 32.3 bits (70), Expect = 0.45
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +2
Query: 254 QVKWINRQ--RVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMK 427
+ +W Q ++++ R + R + +++K + P+ + ++ V + S+ +
Sbjct: 69 EYRWAGAQDPKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYDVKQVV--QASKAQ 126
Query: 428 NCNKCILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDP 607
+ I+F + M + ++P GP+A F + N+ ++ G + P L FD
Sbjct: 127 DSTDLIIFTETRGNPDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGT-MSEQYPHLIFDN 185
Query: 608 QFTKDPHYCLLKELLVQIFGVPNYHSKKSTIF 703
+K H +L +F VP SK+ F
Sbjct: 186 LNSKLGH--RFTTILKHLFPVPKPDSKRIITF 215
>U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein.
Length = 293
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMW 484
I H+ L++DIK+ +S L +V+ +K C KC++F+G + D+Y +
Sbjct: 222 ITAHHQELLQDIKR---------NFSKSLLLILVSYCIVLK-CFKCLIFQGTSINDIYHF 271
Query: 485 I 487
I
Sbjct: 272 I 272
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 245 APKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEM 424
A + K I +++ + ++ ++ EDI KL + E K+ ++ + + +EI++
Sbjct: 170 AGEDSKTIANRQIALSGVKNEFYKLAEASEDISKLQGINCIEDKINKNVAVEIFSEIADA 229
Query: 425 KNCNKCIL--FEGRKM 466
+NC + FE K+
Sbjct: 230 RNCMNTFVDSFENEKI 245
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCIL 448
+N +H P H ++M+RSK +V+ +KNC++ +L
Sbjct: 137 VNLQHTLTPSPYASSTPKHTPTNQMDRSKISFVIKPQINLKNCSRELL 184
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 336 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 377
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 105 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 146
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 103 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 144
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 161 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 202
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 336 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 377
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 105 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 146
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 103 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 144
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 INHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCN 436
I+HR +H K L+PHH + ++R ++L +N S + N
Sbjct: 161 ISHRQQHHTSYEKDLIPHHNID--VDRRRSLQALNGSSALYQLN 202
>U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical
protein C50F7.1b protein.
Length = 381
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 596 SFDPQFTKDPHYCLLKELLVQIFGVPNYHSKKSTIFRSCVYLYGIRXQNLXQKLSEFCLK 775
S+D ++TK + + L+ IFG+PN+++ +++ Y Y + QKL +
Sbjct: 140 SWDREYTKYVIFAVW--LVAAIFGIPNWYNYDLIVWQEGSYGYRLCTSQTDQKLYFLFVN 197
Query: 776 MVL 784
++L
Sbjct: 198 LLL 200
>AF099922-6|AAK21408.1| 115|Caenorhabditis elegans Hypothetical
protein F56F11.1 protein.
Length = 115
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 461 KMRDLYMWISNIPNGP 508
KM DLY WISN GP
Sbjct: 96 KMSDLYRWISNEKRGP 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,228,035
Number of Sequences: 27780
Number of extensions: 409138
Number of successful extensions: 980
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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