Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C12
         (871 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    25   1.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.8  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   4.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   4.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   6.4  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   8.5  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   8.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.5  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 584 KLRKQVGDNFTEEQLKEFIW 643
           K+ KQ+  N  E Q  E+IW
Sbjct: 355 KIIKQISSNIYERQNNEYIW 374


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 125 NCIPCRSSRLPSPHSTVNLNSLKPTQRA 208
           N  PC  +R+ SPH         P +RA
Sbjct: 368 NTAPCGDARIFSPHEENESVDKHPNRRA 395


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 255 VHRVFVHVLPIL 220
           V RVF+HVLP L
Sbjct: 341 VRRVFIHVLPRL 352


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 388 PAVHRTHASLPHH 426
           P  H +HA+ PHH
Sbjct: 430 PHHHHSHAATPHH 442


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 660 PDLSVFQMNSLSCSSVKLSPTCLRSFSS 577
           PD+SV+    ++     + PT    FSS
Sbjct: 127 PDISVYNSGDMTFDQTGIPPTTCLVFSS 154


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 255 VHRVFVHVLPIL 220
           V RVF+H+LP L
Sbjct: 345 VKRVFIHILPRL 356


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 255 VHRVFVHVLPIL 220
           V RVF+H+LP L
Sbjct: 345 VKRVFIHILPRL 356


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 611 FTEEQL--KEFIWKTLKSGQVVPGLR 682
           +T EQ   KE +W ++K   ++ G+R
Sbjct: 795 YTFEQFHNKELLWTSVKKALMIVGIR 820


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 611 FTEEQL--KEFIWKTLKSGQVVPGLR 682
           +T EQ   KE +W ++K   ++ G+R
Sbjct: 833 YTFEQFHNKELLWTSVKKALMIVGIR 858


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,242
Number of Sequences: 438
Number of extensions: 4602
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)