Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C09
(879 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 255 1e-66
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 241 1e-62
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 234 2e-60
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 206 4e-52
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 197 4e-49
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 195 1e-48
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 195 1e-48
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 192 1e-47
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 187 3e-46
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 180 3e-44
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 179 8e-44
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 179 1e-43
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 178 1e-43
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 175 1e-42
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 175 1e-42
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 174 2e-42
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 171 2e-41
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 167 3e-40
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 166 6e-40
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 164 2e-39
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 164 2e-39
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 160 4e-38
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 159 7e-38
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 159 1e-37
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 156 8e-37
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 156 8e-37
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 155 1e-36
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 155 2e-36
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 154 2e-36
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 154 2e-36
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 153 6e-36
UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n... 153 6e-36
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 152 1e-35
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 146 5e-34
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 144 2e-33
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 144 3e-33
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 142 8e-33
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 141 2e-32
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 140 4e-32
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 140 6e-32
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 140 6e-32
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 138 1e-31
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 138 2e-31
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 137 3e-31
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 137 3e-31
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 137 4e-31
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 137 4e-31
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 136 5e-31
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 136 5e-31
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 136 5e-31
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 136 7e-31
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 136 7e-31
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 136 9e-31
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 136 9e-31
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 135 2e-30
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 134 2e-30
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 134 2e-30
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 134 3e-30
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 134 3e-30
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 134 3e-30
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 134 3e-30
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 133 5e-30
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 133 5e-30
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 133 5e-30
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 133 5e-30
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 133 5e-30
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 133 5e-30
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 133 6e-30
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 132 9e-30
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 132 9e-30
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 132 1e-29
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 132 1e-29
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 132 1e-29
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 132 1e-29
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 132 1e-29
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 132 1e-29
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 131 2e-29
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 131 2e-29
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 131 2e-29
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 131 2e-29
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 131 3e-29
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 131 3e-29
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 131 3e-29
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 130 3e-29
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 130 3e-29
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 130 3e-29
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 130 5e-29
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 130 5e-29
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 130 5e-29
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 130 5e-29
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 130 5e-29
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 130 6e-29
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 130 6e-29
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 130 6e-29
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 130 6e-29
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 130 6e-29
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 129 8e-29
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 129 8e-29
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 129 8e-29
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 129 8e-29
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 129 8e-29
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 129 1e-28
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 129 1e-28
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 129 1e-28
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 129 1e-28
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 129 1e-28
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 128 1e-28
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 128 1e-28
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 128 1e-28
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 128 2e-28
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 128 2e-28
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 128 2e-28
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 128 2e-28
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 128 2e-28
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 128 2e-28
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 128 2e-28
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 128 2e-28
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 127 3e-28
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 127 4e-28
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 127 4e-28
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 127 4e-28
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 126 6e-28
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 126 6e-28
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 126 6e-28
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 92 7e-28
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 126 7e-28
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 126 7e-28
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 126 7e-28
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 126 7e-28
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 126 7e-28
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 126 7e-28
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 126 1e-27
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 126 1e-27
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 126 1e-27
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 125 1e-27
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 125 1e-27
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 125 2e-27
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 125 2e-27
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 124 2e-27
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 124 2e-27
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 124 2e-27
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 124 3e-27
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 124 3e-27
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 124 3e-27
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 124 3e-27
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 124 3e-27
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 124 3e-27
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 124 3e-27
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 124 4e-27
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 124 4e-27
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 124 4e-27
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 124 4e-27
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 124 4e-27
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 124 4e-27
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 124 4e-27
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 123 5e-27
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 123 5e-27
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 123 5e-27
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 123 7e-27
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 123 7e-27
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 123 7e-27
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 122 9e-27
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 122 9e-27
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 122 9e-27
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 122 1e-26
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 122 1e-26
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 122 1e-26
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 122 1e-26
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 122 1e-26
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 122 2e-26
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 122 2e-26
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 122 2e-26
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 122 2e-26
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 122 2e-26
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 122 2e-26
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 121 2e-26
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 121 2e-26
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 121 2e-26
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 121 2e-26
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 121 2e-26
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 121 2e-26
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 121 3e-26
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 121 3e-26
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 121 3e-26
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 121 3e-26
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 121 3e-26
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 121 3e-26
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 121 3e-26
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 121 3e-26
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 120 4e-26
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 120 4e-26
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 120 4e-26
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 120 4e-26
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 120 4e-26
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 120 4e-26
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 120 4e-26
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 120 4e-26
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 120 4e-26
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 120 5e-26
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 120 5e-26
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 120 5e-26
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 120 5e-26
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 120 5e-26
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 120 5e-26
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 120 6e-26
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 120 6e-26
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 120 6e-26
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 120 6e-26
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 120 6e-26
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 120 6e-26
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 120 6e-26
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 119 9e-26
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 119 9e-26
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 119 9e-26
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 119 9e-26
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 119 9e-26
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 119 9e-26
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 119 9e-26
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 119 9e-26
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 119 9e-26
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 119 9e-26
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 119 1e-25
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 119 1e-25
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 119 1e-25
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 118 1e-25
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 118 1e-25
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 118 1e-25
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 118 1e-25
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 118 2e-25
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 118 2e-25
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 118 3e-25
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 118 3e-25
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 118 3e-25
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 117 3e-25
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 117 3e-25
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 117 3e-25
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 117 3e-25
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 117 3e-25
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 117 5e-25
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 117 5e-25
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 117 5e-25
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 117 5e-25
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 117 5e-25
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 117 5e-25
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 117 5e-25
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 116 6e-25
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 116 6e-25
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 116 6e-25
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 116 6e-25
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 116 6e-25
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 116 6e-25
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 116 8e-25
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 116 8e-25
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 116 8e-25
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 116 8e-25
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 116 8e-25
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 116 1e-24
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 116 1e-24
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 116 1e-24
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 115 1e-24
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 115 1e-24
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 115 1e-24
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 115 1e-24
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 115 1e-24
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 115 1e-24
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 115 1e-24
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 115 1e-24
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 115 1e-24
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 115 1e-24
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 115 2e-24
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 115 2e-24
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 115 2e-24
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 114 2e-24
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 114 2e-24
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 114 3e-24
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 113 4e-24
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 113 4e-24
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 113 4e-24
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 113 4e-24
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 113 4e-24
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 113 4e-24
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 113 6e-24
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 113 6e-24
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 113 6e-24
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 113 6e-24
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 113 6e-24
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 113 6e-24
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 113 6e-24
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 113 6e-24
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 113 7e-24
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 113 7e-24
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 113 7e-24
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 113 7e-24
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 113 7e-24
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 113 7e-24
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 113 7e-24
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 113 7e-24
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 112 1e-23
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 112 1e-23
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 112 1e-23
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 112 1e-23
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 112 1e-23
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 112 1e-23
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 112 1e-23
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 112 1e-23
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 111 2e-23
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 111 2e-23
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 111 2e-23
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 111 2e-23
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 111 2e-23
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 111 2e-23
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 111 2e-23
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 111 2e-23
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 111 2e-23
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 111 2e-23
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 111 2e-23
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 111 2e-23
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 111 2e-23
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 111 2e-23
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 111 3e-23
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 111 3e-23
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 111 3e-23
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 111 3e-23
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 111 3e-23
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 111 3e-23
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 111 3e-23
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 110 4e-23
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 110 4e-23
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 110 4e-23
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 110 5e-23
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 110 5e-23
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 110 5e-23
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 110 5e-23
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 110 5e-23
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 110 5e-23
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 109 7e-23
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 109 7e-23
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 109 7e-23
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 109 7e-23
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 109 9e-23
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 109 9e-23
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 109 9e-23
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 109 9e-23
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 109 9e-23
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 109 1e-22
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 109 1e-22
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 109 1e-22
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 109 1e-22
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 109 1e-22
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 109 1e-22
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 109 1e-22
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 108 2e-22
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 108 2e-22
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 108 2e-22
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 108 2e-22
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 108 2e-22
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 108 2e-22
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 108 2e-22
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 108 2e-22
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 108 2e-22
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 108 2e-22
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 108 2e-22
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 108 2e-22
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 108 2e-22
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 108 2e-22
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 108 2e-22
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 108 2e-22
UniRef50_Q7R3S1 Cluster: GLP_82_62372_60057; n=1; Giardia lambli... 108 2e-22
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 108 2e-22
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 108 2e-22
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 107 3e-22
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 107 3e-22
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 107 3e-22
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 107 3e-22
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 107 3e-22
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 107 3e-22
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 107 4e-22
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 107 4e-22
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 107 4e-22
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 107 4e-22
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 107 4e-22
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 107 4e-22
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 107 4e-22
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 107 4e-22
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 107 4e-22
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 107 5e-22
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 107 5e-22
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 107 5e-22
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 107 5e-22
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 107 5e-22
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 107 5e-22
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 107 5e-22
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 106 6e-22
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 106 6e-22
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 106 6e-22
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 106 6e-22
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 106 6e-22
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 106 6e-22
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 106 6e-22
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 106 6e-22
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 106 6e-22
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 106 8e-22
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 106 8e-22
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 106 8e-22
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 106 8e-22
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 106 8e-22
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 106 8e-22
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 105 1e-21
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 105 1e-21
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 105 1e-21
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 105 1e-21
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 105 1e-21
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 105 1e-21
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 105 1e-21
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 105 1e-21
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 105 1e-21
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 105 1e-21
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 105 1e-21
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 105 1e-21
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 105 1e-21
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 105 2e-21
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 105 2e-21
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 105 2e-21
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 105 2e-21
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 105 2e-21
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 105 2e-21
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 105 2e-21
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 104 3e-21
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 104 3e-21
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 104 3e-21
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 104 3e-21
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 104 3e-21
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 104 3e-21
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 104 3e-21
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 104 3e-21
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 104 3e-21
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 104 3e-21
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 104 3e-21
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 104 3e-21
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 104 3e-21
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 104 3e-21
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 104 3e-21
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 104 3e-21
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 103 5e-21
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 103 5e-21
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 103 5e-21
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 103 5e-21
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 103 5e-21
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 103 5e-21
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 103 5e-21
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 103 5e-21
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 103 5e-21
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 103 6e-21
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 103 6e-21
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 103 6e-21
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 103 6e-21
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 103 6e-21
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 103 6e-21
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 103 6e-21
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 103 6e-21
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 103 6e-21
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 103 6e-21
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 103 8e-21
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 103 8e-21
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 103 8e-21
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 103 8e-21
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 103 8e-21
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 103 8e-21
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 103 8e-21
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 103 8e-21
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 102 1e-20
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 102 1e-20
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 102 1e-20
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 102 1e-20
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 102 1e-20
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 102 1e-20
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 102 1e-20
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 102 1e-20
UniRef50_A6G2A2 Cluster: DEAD/DEAH box helicase-like protein; n=... 102 1e-20
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 102 1e-20
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 102 1e-20
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 102 1e-20
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 101 2e-20
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 101 2e-20
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 101 2e-20
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 101 2e-20
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 101 2e-20
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 101 2e-20
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 101 2e-20
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 101 2e-20
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 101 2e-20
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 101 2e-20
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 101 2e-20
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 101 2e-20
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 101 2e-20
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 101 2e-20
>UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase
Dbp45A; n=5; Endopterygota|Rep: Probable ATP-dependent
RNA helicase Dbp45A - Drosophila melanogaster (Fruit
fly)
Length = 521
Score = 255 bits (624), Expect = 1e-66
Identities = 116/190 (61%), Positives = 145/190 (76%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
M + F +LG++PWL+KQL LG++ TPIQ+ CI +L G DCIGAAKTGSGKTFA
Sbjct: 1 MQRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFA 60
Query: 411 FALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
FALPI++ L+E+P FALVLTPTHELAYQI++QF + GQ + +RVC+V+GG+DQ+ ES
Sbjct: 61 FALPILERLSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQ 120
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
KL +RPHIVVAMPGRLADH++GCDTFS +KYLV+DEADR+ + F L I LP
Sbjct: 121 KLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLPK 180
Query: 771 KRQXLLFSAT 800
RQ L FSAT
Sbjct: 181 TRQNLFFSAT 190
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 241 bits (591), Expect = 1e-62
Identities = 109/185 (58%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ WL++Q LG++ PTP+Q GCI +L G DC+G AKTGSGKT AF LPI+Q
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L+EDPYGIF LVLTPT ELAYQIA+QF +LG+PL L+ CI+ GG D + ++L+L+++PH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE---SFXXRLETIFSALPSKRQXL 785
V+A PGRLADH+ +TFS+KKI++LV+DEADRL + F LE I +A+P++RQ L
Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTL 183
Query: 786 LFSAT 800
LFSAT
Sbjct: 184 LFSAT 188
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 234 bits (573), Expect = 2e-60
Identities = 106/183 (57%), Positives = 137/183 (74%), Gaps = 3/183 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ PWL++Q LG+R PTP+Q+ C+ +L G DC+G AKTGSGKT AF LPI+Q
Sbjct: 4 FGALGLAPWLVEQCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPILQK 63
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L+EDPYGIF LVLTPT ELAYQIA+QF +LG+PL L+ CIV GG D + ++L L+++PH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALDLSRKPHV 123
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE---SFXXRLETIFSALPSKRQXL 785
V+A PGRLADH+ TFS+KKI++LV+DEADRL + F L+ I A+P RQ L
Sbjct: 124 VIATPGRLADHLRSSSTFSIKKIRFLVMDEADRLLEQGCSEFTKDLKVILGAVPDLRQTL 183
Query: 786 LFS 794
LFS
Sbjct: 184 LFS 186
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 206 bits (504), Expect = 4e-52
Identities = 98/187 (52%), Positives = 137/187 (73%), Gaps = 3/187 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K+F+ LGV W+ +QL T+ I+T TP+Q CI ++L G D +G A+TG+GKT AFA+PI+
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
Q L+ DPYGI+AL+LTPT ELA+QIA+QFT LG+P+ L+ ++ GG I ++ +L++RP
Sbjct: 149 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 208
Query: 609 HIVVAMPGRLADHI-SGCDTFS--LKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
H+VVA PGRLAD I S DT + KKI++ VLDEADR+ + +L+ IF ++ KRQ
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 780 XLLFSAT 800
LL SAT
Sbjct: 269 TLLLSAT 275
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 197 bits (480), Expect = 4e-49
Identities = 100/191 (52%), Positives = 133/191 (69%), Gaps = 9/191 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F L V+PWL++ L + I+ PT IQKGCI +L G DCIG ++TGSGKT AFA+PI+Q
Sbjct: 197 FDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQQ 256
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
A +P IF ++LTPT ELA QI +Q L QP L+ ++TGG+D ++++ LAKRPH+
Sbjct: 257 WAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRKQAIDLAKRPHL 316
Query: 615 VVAMPGRLADHI--SGCDTF-SLKKIKYLVLDEADRLFSE----SFXXRLETIFSAL--P 767
V+A PGRLADHI SG DT L+++K++VLDEADRL + S +E FS L P
Sbjct: 317 VIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADRLLANSGHGSMLPDVEECFSVLPPP 376
Query: 768 SKRQXLLFSAT 800
S+RQ LLF+AT
Sbjct: 377 SERQTLLFTAT 387
>UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14;
Ascomycota|Rep: ATP-dependent RNA helicase DBP8 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 431
Score = 195 bits (476), Expect = 1e-48
Identities = 99/188 (52%), Positives = 127/188 (67%), Gaps = 5/188 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F LG+ WL + L + I PT IQK CI ++L G DCIG AKTGSGKT AFA P++
Sbjct: 3 DFKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLT 62
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
+EDP G+F +VLTPT ELA QIA+QFT LG + +RV ++ GG ++++L L ++PH
Sbjct: 63 KWSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPH 122
Query: 612 IVVAMPGRLADHI--SGCDTF-SLKKIKYLVLDEADRLFSESFXXRLETIFSALP--SKR 776
++A PGRLA HI SG DT L + KYLVLDEAD L + +F L T SALP KR
Sbjct: 123 FIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKR 182
Query: 777 QXLLFSAT 800
Q LLF+AT
Sbjct: 183 QTLLFTAT 190
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 195 bits (475), Expect = 1e-48
Identities = 91/184 (49%), Positives = 128/184 (69%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ LI L ++ I+ PT IQ C+ +L+G DCIG AKTGSGKT AFALPI++
Sbjct: 154 FESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVER 213
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
+A DP+G++A+VLTPT ELAYQ+++QF ++G+PL L + GG D ++++ +L RPHI
Sbjct: 214 IARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPHI 273
Query: 615 VVAMPGRLADHI--SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+VA PGRL D + G L +++ LVLDEADR+ + SF L +FS +P+KRQ L
Sbjct: 274 IVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLFSQIPAKRQTCL 333
Query: 789 FSAT 800
F+AT
Sbjct: 334 FTAT 337
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 192 bits (468), Expect = 1e-47
Identities = 94/186 (50%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F LG+ WL+ LG + P+ IQ I +L G D I +AKTGSGKT +FA+PI+
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L+EDPYG+FA++LTPT ELA QI +QF +G P+ + +V GG D + ++L L KRP
Sbjct: 64 NQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRP 123
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSAL--PSKRQX 782
HI+VA PGRLA H++ +LK K+LVLDEADRL E F + +I L P KRQ
Sbjct: 124 HIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQT 183
Query: 783 LLFSAT 800
LLFSAT
Sbjct: 184 LLFSAT 189
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 187 bits (456), Expect = 3e-46
Identities = 95/184 (51%), Positives = 120/184 (65%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ WL+ +LG+R PT +Q+ CI R L G D +G A+TGSGKT AFALPI+
Sbjct: 79 FAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHR 138
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L EDPYG+ AL L PT ELA Q+A+QF LG PL LR GG D + ++ LA+RPH+
Sbjct: 139 LGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPHV 198
Query: 615 VVAMPGRLADHISGCDTFS--LKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
VVA PGR+A I+ + + K+LVLDEADR+ +F L IF +LP KRQ L
Sbjct: 199 VVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQTFL 258
Query: 789 FSAT 800
FSAT
Sbjct: 259 FSAT 262
>UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase
superfamily II protein; n=2; Ostreococcus|Rep: Ddx49
Ddx49-related DEAD box helicase superfamily II protein -
Ostreococcus tauri
Length = 419
Score = 180 bits (439), Expect = 3e-44
Identities = 93/184 (50%), Positives = 121/184 (65%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ ++K L + R+P+ +Q CI ++L G D IG A TGSGKT AFALPI+
Sbjct: 4 FDELGLCNVVLKILKRVHFRSPSDVQSTCIPQILAGKDVIGIANTGSGKTAAFALPIVDM 63
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L+ DPYGIFAL L+PT ELA QIADQFT+ G L ++TGG D I+++ L++RP+I
Sbjct: 64 LSRDPYGIFALCLSPTRELANQIADQFTVFGAGTGLNCMVITGGEDLIQQATALSRRPNI 123
Query: 615 VVAMPGRLADHI--SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
VVA PGRL +H S K+K L+LDEADRL SF L+ + S LP +RQ L+
Sbjct: 124 VVATPGRLFEHFMHSSNTVQYFSKLKCLILDEADRLLDSSFAAELKYLMSNLPQQRQTLM 183
Query: 789 FSAT 800
FSAT
Sbjct: 184 FSAT 187
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 179 bits (436), Expect = 8e-44
Identities = 87/189 (46%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
Frame = +3
Query: 240 NDGK--EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAF 413
+DGK EF+ LGV P +++ +G + PTPIQ I L D IG A+TGSGKT AF
Sbjct: 99 DDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAF 158
Query: 414 ALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK 593
+PI+Q L ++P FA VL PT ELAYQI+ Q LG + +R + GG D + +S+
Sbjct: 159 TIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIA 218
Query: 594 LAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSK 773
L+KRPH++VA PGRL DH+ FSL+ ++YLV+DEADRL F ++ + ++P +
Sbjct: 219 LSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRE 278
Query: 774 RQXLLFSAT 800
R+ +LFSAT
Sbjct: 279 RRTMLFSAT 287
>UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 454
Score = 179 bits (435), Expect = 1e-43
Identities = 84/163 (51%), Positives = 108/163 (66%)
Frame = +3
Query: 312 RTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIFALVLTPTHEL 491
R PTPIQ I L G D IG A TGSGKT AF +P++ HL ED I+ +VL P+ EL
Sbjct: 53 RHPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQRIYCVVLAPSREL 112
Query: 492 AYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDTFS 671
QIA+QF L + L+VC++ GG D + ++ LAKRPH++VA PGRLADH+ FS
Sbjct: 113 CEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTKGFS 172
Query: 672 LKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L +K LV+DEADRL S+ F L+ I A+P++RQ LFSAT
Sbjct: 173 LSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQTFLFSAT 215
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 178 bits (434), Expect = 1e-43
Identities = 90/188 (47%), Positives = 119/188 (63%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
E + K F LGV L + LG PT IQ I L G D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 417 LPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
LPI+ L E P +FALVLTPT ELA+QI++QF LG + ++ ++ GG D + +SL L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
AK+PHI++A PGRL DH+ F+L+ +KYLV+DEADR+ + F ++ I +P R
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 777 QXLLFSAT 800
+ LFSAT
Sbjct: 200 KTFLFSAT 207
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 175 bits (426), Expect = 1e-42
Identities = 88/188 (46%), Positives = 119/188 (63%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
++D F LGV L + LG + PT IQ I L+G D IG A+TGSGKT AF
Sbjct: 37 DDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFT 96
Query: 417 LPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+PI+Q L E P +F+L+L PT EL+ QI +Q LG + L VC++ GG D + ++L+L
Sbjct: 97 IPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQL 156
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
+K+PHI+V PGR+ADH+ FSL+ IKYLVLDEAD+L S F L I ++LP +
Sbjct: 157 SKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSLPKDK 216
Query: 777 QXLLFSAT 800
L+SAT
Sbjct: 217 VTYLYSAT 224
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 175 bits (426), Expect = 1e-42
Identities = 95/196 (48%), Positives = 122/196 (62%), Gaps = 12/196 (6%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K FA LGV+ L+K LG + P+ IQ + L G D IG A+TGSGKT AFA+PI+
Sbjct: 9 KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPIL 68
Query: 429 QHLAEDPY------------GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSD 572
Q L E Y FA VL+PT ELA QIA+QF LG + LR ++ GG D
Sbjct: 69 QALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGID 128
Query: 573 QIEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETI 752
++++++ L KRPH++VA PGRL DH+S FSLK +KYLVLDEADRL +E F L I
Sbjct: 129 RMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQI 188
Query: 753 FSALPSKRQXLLFSAT 800
+P +R+ LFSAT
Sbjct: 189 LEEIPLERKTFLFSAT 204
>UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP8 -
Ustilago maydis (Smut fungus)
Length = 602
Score = 174 bits (424), Expect = 2e-42
Identities = 90/189 (47%), Positives = 128/189 (67%), Gaps = 7/189 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ +G+ P LI+ L +L I+ PTPIQ I +L G D +G A+TGSGKT FALPI+
Sbjct: 111 FSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPILNK 170
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK--LRVCIVTGGSDQIEESLKLAK-R 605
L +D G FA+VLTPT EL Q+ +QF +G+ + LR +V GG D ++++ +LA R
Sbjct: 171 LIKDMVGGFAVVLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQASELANLR 230
Query: 606 PHIVVAMPGRLADHI--SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR- 776
PH++VA PGRL DH+ G + + L++ K+LVLDEADRL +++F LE ++S LPS +
Sbjct: 231 PHVIVATPGRLVDHLRSGGGEEWGLRRCKFLVLDEADRLLTDTFKPELEYLYSVLPSAKT 290
Query: 777 -QXLLFSAT 800
Q LLF+AT
Sbjct: 291 LQTLLFTAT 299
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 171 bits (417), Expect = 2e-41
Identities = 84/186 (45%), Positives = 117/186 (62%), Gaps = 4/186 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG ++ + +GI PT +Q+ C+ +++TG +CI ++TG+GKT AFALPII
Sbjct: 5 FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIIST 64
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L++DPYGI+ALV++PT ELA QI QF I G+ + +C + GG +++ L K PHI
Sbjct: 65 LSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIGGLAITDQASALEKNPHI 124
Query: 615 VVAMPGRLADHI----SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
VVA PGR+ H+ G FS ++YLVLDE DRLF + + + I LP KRQ
Sbjct: 125 VVATPGRILHHLRSASKGNTRFSFDNLQYLVLDEVDRLFKDGYWDDVLEIIKYLPEKRQT 184
Query: 783 LLFSAT 800
L FSAT
Sbjct: 185 LCFSAT 190
>UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 520
Score = 167 bits (406), Expect = 3e-40
Identities = 93/198 (46%), Positives = 120/198 (60%), Gaps = 7/198 (3%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF LGV WL KQ + + PTPIQK CI +L G +G A TGSGKT AF LP++Q
Sbjct: 3 EFEALGVHQWLSKQCAYMALHHPTPIQKLCIPSILAGKCVVGGAATGSGKTAAFVLPLLQ 62
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
LAEDPYG+FALVLTP+ ELAYQI DQF LG PL +R + GG ++ L RPH
Sbjct: 63 ILAEDPYGVFALVLTPSRELAYQILDQFVALGAPLHIRAALAIGGVPHEQQVSVLHGRPH 122
Query: 612 IVVAMPGRLADHISGCDTF--SLKKIKYLVLDEADRLFSESFXXRLETIFSAL-PSK--R 776
+VVA PGRL + + +++LVLDEADRL ++ + + L P + R
Sbjct: 123 VVVATPGRLKFLLGTFPEARKAFSHLRFLVLDEADRLTTDDMEGDVSDVVELLQPPRPTR 182
Query: 777 QXLLFSAT--XHLMCVNR 824
+ LLF+AT HL+ V +
Sbjct: 183 RTLLFTATLEQHLVRVEK 200
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 166 bits (404), Expect = 6e-40
Identities = 91/191 (47%), Positives = 116/191 (60%), Gaps = 6/191 (3%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF LG++ WL +Q + + TPTPIQ CI +L G +G A TGSGKT AFALPI+Q
Sbjct: 3 EFQRLGIQRWLSEQCTYMALETPTPIQCKCIPAILAGRHVVGGAATGSGKTAAFALPILQ 62
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
LA D YG+FALVLTP+ ELAYQI DQF G PL++R + GG + L RPH
Sbjct: 63 TLAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRTMLAVGGVPTETQVDALKARPH 122
Query: 612 IVVAMPGRLADHISGCDTFSLKK----IKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
IV A PGRL H+ ++K ++YLVLDEADRL ++++ LP RQ
Sbjct: 123 IVAATPGRLR-HLLEVFAPEVQKAFAHLRYLVLDEADRLTEGDILRDVQSLLRLLPPTRQ 181
Query: 780 --XLLFSATXH 806
L+F+AT H
Sbjct: 182 RRVLMFTATLH 192
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 164 bits (399), Expect = 2e-39
Identities = 92/187 (49%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ LGV P L + L I PT IQ+ + + G D G A+TGSGKT FALPI+Q
Sbjct: 63 FSSLGVSPMLAQLLNQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPILQE 122
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L++DPYGIFALVLTPT ELA QI Q G PL ++ + GG D +E+S L RPHI
Sbjct: 123 LSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIGGKDSVEQSAILDSRPHI 182
Query: 615 VVAMPGRLADHI-SGCDTFSLKKIKYLVLDEADRLF--SESFXXRLETIFSALP--SKRQ 779
++A PGRLA + S + +++KYLVLDEADRL F +L I ALP SKR
Sbjct: 183 LIATPGRLAYMLESAAAQRNFRRMKYLVLDEADRLLCGDPEFNKQLTMILQALPPISKRT 242
Query: 780 XLLFSAT 800
LF+AT
Sbjct: 243 TFLFTAT 249
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 164 bits (399), Expect = 2e-39
Identities = 83/172 (48%), Positives = 110/172 (63%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
E + K F LGV L + LG PT IQ I L G D IG A+TGSGKT AFA
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 68
Query: 417 LPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
LPI+ L E P +FALVLTPT ELA+QI++QF LG + ++ ++ GG D + +SL L
Sbjct: 69 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 128
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETI 752
AK+PHI++A PGRL DH+ F+L+ +KYLV+DEADR+ + F ++ I
Sbjct: 129 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 180
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 160 bits (389), Expect = 4e-38
Identities = 84/184 (45%), Positives = 114/184 (61%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ W+ K +G + PT IQ+ I LL I A+TGSGKT FA PI+Q
Sbjct: 4 FAKLGLDSWIQKTCDKVGYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQD 63
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
LA+DP+G+FA+VLT ELA QI++QFTI G L LRV + GG D ++ +L + PHI
Sbjct: 64 LAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVDFNKQLSELERIPHI 123
Query: 615 VVAMPGRLADHISGCDTFS--LKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
VV PGR D I ++ +KYLVLDEADRLF +S +++I +P ++Q +L
Sbjct: 124 VVGTPGRTLDMIDKSPVLKEYIENVKYLVLDEADRLFEDSIIEDIQSILEFIPQEKQIIL 183
Query: 789 FSAT 800
+AT
Sbjct: 184 ATAT 187
>UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 488
Score = 159 bits (387), Expect = 7e-38
Identities = 81/188 (43%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LGV W+I+ +L I+ PT IQK C+ G + IG ++TG+GKT F PI+
Sbjct: 79 FESLGVPNWIIEICKSLQIKKPTKIQKLCLPSAFKGKNLIGCSETGTGKTICFCWPILTS 138
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
LA++PYG+++LVLTPT ELA+QI+DQF I G + + V GG D + +S+++ KRPH+
Sbjct: 139 LAKNPYGVYSLVLTPTRELAFQISDQFRIFGVNMNIVVLSCVGGVDIVSQSIEMEKRPHV 198
Query: 615 VVAMPGRLADHISGCD---TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSK---R 776
++A PGRLA +S + + +KYLV DE+DRL SF L+ I +P R
Sbjct: 199 IIATPGRLAYQVSNPERNLSSIFANVKYLVFDESDRLLDISFQEPLKEILKCIPKSSEGR 258
Query: 777 QXLLFSAT 800
+FSAT
Sbjct: 259 ITFMFSAT 266
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 159 bits (385), Expect = 1e-37
Identities = 81/183 (44%), Positives = 114/183 (62%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF L + LIK GI PT +Q+ I +L G D I ++TGSGKT AF LPI+
Sbjct: 2 EFGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVS 61
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
HL + + LV+ PT EL+ QIA+ F + Q LRVC++ GG++ ++ +L+KRPH
Sbjct: 62 HLLQKNRSFYCLVVAPTRELSSQIAECFNMF-QATGLRVCLLVGGANFNVQANQLSKRPH 120
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+VV PGR+A+H+ +F ++++ VLDEADR F + F LETI +L KRQ LLF
Sbjct: 121 VVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLETIIPSLREKRQTLLF 180
Query: 792 SAT 800
+AT
Sbjct: 181 TAT 183
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 156 bits (378), Expect = 8e-37
Identities = 83/184 (45%), Positives = 111/184 (60%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ L + TLG ++PT IQ + L G D I A+TGSGKT AF LPI+Q
Sbjct: 53 FASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQR 112
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L + +AL+L PT EL QI+ Q +G L + V + GG D +++ LAK+PH+
Sbjct: 113 LLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPHV 172
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSAL--PSKRQXLL 788
VV PGR+ DH+ FSLK +K LVLDEADRL S F L+ + + P++RQ +L
Sbjct: 173 VVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQTML 232
Query: 789 FSAT 800
FSAT
Sbjct: 233 FSAT 236
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 156 bits (378), Expect = 8e-37
Identities = 80/185 (43%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F+ L + P LI+ L PTPIQ I L G D IG A+TGSGKT AFA+PI+
Sbjct: 81 ESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPIL 140
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L D +A +L PT ELA QI + F LG + +R + GG + ++++ L ++P
Sbjct: 141 NRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKP 200
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS-KRQXL 785
HI++A PGRL DH+ FSL+K+K+LV+DEADRL F L+ I +P+ +R
Sbjct: 201 HIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTY 260
Query: 786 LFSAT 800
LFSAT
Sbjct: 261 LFSAT 265
>UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2;
Cryptosporidium|Rep: ATP-dependent RNA helicase -
Cryptosporidium hominis
Length = 499
Score = 155 bits (376), Expect = 1e-36
Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 7/190 (3%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF LG+ W+ +L I+TPT IQ I +L G + +G A TGSGKT + LP++Q
Sbjct: 2 EFLNLGLHKWVQDTCDSLKIQTPTAIQSKSIPYILKGRNVVGNAPTGSGKTLCYCLPMLQ 61
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEE-SLKLAKRP 608
LAEDP+ +F LVL P+ EL+YQ+ DQF + G + ++TGG D+ E+ + KRP
Sbjct: 62 ILAEDPFSVFGLVLVPSRELSYQVLDQFQVFGNKVNANCQVLTGGFDESEQIHILNQKRP 121
Query: 609 HIVVAMPGRLADHIS--GCDTFS-LKKIKYLVLDEADRLFSESFXXRLETIFSALPSK-- 773
HI++ PGRL+ IS G + L+ +++LVLDEADRL SES + I S LP
Sbjct: 122 HILIGTPGRLSSIISYPGSNISDLLRNLRFLVLDEADRLLSESLEDDMLPILSILPKSCT 181
Query: 774 -RQXLLFSAT 800
RQ LLFSAT
Sbjct: 182 GRQTLLFSAT 191
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 155 bits (375), Expect = 2e-36
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 15/196 (7%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LGV P +++ L GI PT +QKGCI +L G+D + AKTGSGKT AF +PI+Q
Sbjct: 3 FGELGVCPEIVELLRDKGISAPTEVQKGCIPVILEGNDVVACAKTGSGKTAAFLIPILQS 62
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFT----ILGQPLKLRVCIVTGGSDQIEESLKLAK 602
L + ++AL++TPT ELA+QI +Q I G+PL V ++TGG I +S+ LA+
Sbjct: 63 LMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPL-CNVLVITGGRSIIHQSIDLAR 121
Query: 603 RPHIVVAMPGRLAD-----------HISGCDTFSLKKIKYLVLDEADRLFSESFXXRLET 749
PHI+V+ PGRLAD +++ ++L + K +VLDEADRL ++F L
Sbjct: 122 SPHIIVSTPGRLADLLRTQIAAQEANVTDKQEWTLSRTKVVVLDEADRLLEDNFGKDLTI 181
Query: 750 IFSALPSKRQXLLFSA 797
I ALP +RQ LL A
Sbjct: 182 IMKALPKRRQTLLLVA 197
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 154 bits (374), Expect = 2e-36
Identities = 74/188 (39%), Positives = 110/188 (58%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
E F L + +++ + LG + PT IQ+ + D IG ++TGSGKT F
Sbjct: 152 EKQNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFI 211
Query: 417 LPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+PI+Q L + +ALV++PT EL QI+ F LG L + +C + GG D + +SL L
Sbjct: 212 IPILQDLKVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSLNL 271
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
AK+P+++V+ PGR+ DH++ F+LK +KYLV DEAD+L S+ F + + LP R
Sbjct: 272 AKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPNR 331
Query: 777 QXLLFSAT 800
LFSAT
Sbjct: 332 ITFLFSAT 339
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 154 bits (374), Expect = 2e-36
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F + P L++ + +L PTPIQ I L G D +G A+TGSGKT AFA+PI+
Sbjct: 98 QSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPIL 157
Query: 429 QHL--AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
Q L A PY +ALVL PT ELA+QI + F LG + LR + GG +E++ L +
Sbjct: 158 QTLYTAAQPY--YALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMR 215
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS-KRQ 779
+PH+++A PGRL DH+ FSLKK++YLV+DE DR+ + ++ I +PS +R
Sbjct: 216 KPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRI 275
Query: 780 XLLFSAT 800
L++AT
Sbjct: 276 TYLYTAT 282
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 153 bits (371), Expect = 6e-36
Identities = 81/191 (42%), Positives = 114/191 (59%), Gaps = 3/191 (1%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
E K F LG+ L G + PT IQ I+ G D IG A+TGSGKT A+A
Sbjct: 49 EFKAKTFQDLGLCQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYA 108
Query: 417 LPIIQHLA---EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEES 587
LP++ L + PY + LV+ PT ELA Q+ QF +LG+ + LRV + GG+D +E++
Sbjct: 109 LPLVNWLLAQRKTPY-LSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQA 167
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
+L+KRPH+VV PGR+ DH+S F L K+ LVLDEAD++ ++ ++ I LP
Sbjct: 168 CELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMNYEKEIDAILEQLP 227
Query: 768 SKRQXLLFSAT 800
R+ +LFSAT
Sbjct: 228 QNRRTMLFSAT 238
>UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n=1;
Toxoplasma gondii RH|Rep: ATP-dependent RNA helicase,
putative - Toxoplasma gondii RH
Length = 574
Score = 153 bits (371), Expect = 6e-36
Identities = 87/190 (45%), Positives = 113/190 (59%), Gaps = 8/190 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LGV P LI+ +L I P+PIQ + L G + G A TGSGKT + P++Q
Sbjct: 134 FASLGVPPALIRTAASLHIFHPSPIQVLSLPHTLRGKNVCGLAPTGSGKTLGYCWPLLQR 193
Query: 435 LAE-DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
+ D + LVL P ELA Q+ DQF I G L +RVC++ GG D +EE L + PH
Sbjct: 194 IGRGDGHAFMGLVLLPARELAIQVLDQFRIYGVQLGVRVCLLLGGRDLVEEGKLLDQCPH 253
Query: 612 IVVAMPGRLADHISGCDTFSLKK----IKYLVLDEADRLFSESFXXRLETIFSALPSK-- 773
IV+A PGR++DH+ D +KK + LVLDEADRL S+ F L+TI S +P+
Sbjct: 254 IVIATPGRMSDHVQN-DPLRMKKRLSLVDVLVLDEADRLLSDEFEDDLKTILSCVPTSSQ 312
Query: 774 -RQXLLFSAT 800
RQ LLFSAT
Sbjct: 313 GRQTLLFSAT 322
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 152 bits (368), Expect = 1e-35
Identities = 90/189 (47%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
+D F LG+K +L+ L GI PT IQ+ CI LL+ + +G A+TGSGKT AFAL
Sbjct: 27 SDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFAL 86
Query: 420 PIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
PII HL+ DPY FALVLTPT ELA QIADQF G + +RV V GG D I L+
Sbjct: 87 PIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDVIRILHHLS 146
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF--SESFXXRLETIFSALPSK 773
PH+++A PG+L I FS K+L+LDEADRLF S ++ I S
Sbjct: 147 GSPHVIIATPGKLVSLIDHL-PFSFDSAKFLILDEADRLFDPSTGMLDDVQKIRSKFSKT 205
Query: 774 RQXLLFSAT 800
LFSAT
Sbjct: 206 VTTGLFSAT 214
>UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 402
Score = 147 bits (355), Expect = 5e-34
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F LGV P +I + ++G PTPIQ+ I + + G+D GAA+TGSGKT AF +P++
Sbjct: 2 DFQALGVHPDIIAAVESMGWSKPTPIQEKTIKQAIAGEDVSGAAETGSGKTGAFLIPLLH 61
Query: 432 HLAE-DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L E D + ++L PT EL QIA+ ++ L + + + GG D +E+ +LAKRP
Sbjct: 62 QLLEKDRPEKYGIILAPTRELVIQIAEVAQLMSAKLNITIVPIYGGVDDVEQMAQLAKRP 121
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
HI+VA PGRLA I F LK ++ +V+DEAD++ + F + I S Q +L
Sbjct: 122 HIIVATPGRLAQLIRDAKGFDLKPVRVIVIDEADKMAAVEFFDDISVITSNCAKTHQIML 181
Query: 789 FSAT 800
FSAT
Sbjct: 182 FSAT 185
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 144 bits (350), Expect = 2e-33
Identities = 85/196 (43%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Frame = +3
Query: 225 VKMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKT 404
VK T F LG+ P L++ L LG PTPIQ+ + LL G D +G A TG+GKT
Sbjct: 28 VKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKT 87
Query: 405 FAFALPIIQHL---AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQ 575
AF+LP++Q + A P+ ALVL PT ELA Q+A+ GQ L + V + GG
Sbjct: 88 AAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGG-QV 146
Query: 576 IEESLKLAKR-PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETI 752
I + L++ KR +VVA PGR DH+ T L++++ +VLDEAD + F LE I
Sbjct: 147 ISQQLRVLKRGVDVVVATPGRALDHLQR-KTLKLEQVRVVVLDEADEMLDMGFAEDLEAI 205
Query: 753 FSALPSKRQXLLFSAT 800
S+ P KRQ LFSAT
Sbjct: 206 LSSTPEKRQTALFSAT 221
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 144 bits (348), Expect = 3e-33
Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 6/190 (3%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F LG+ P ++K + LG + PT IQ+ I L D IG A+TGSGKT +F LP++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMV 68
Query: 429 QHL---AEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKL 596
QHL E G + +++ PT ELA Q+ + +G+ L L C++ GG D +++S++L
Sbjct: 69 QHLLNVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQSVQL 128
Query: 597 AKRPHIVVAMPGRLADHISGCDTF--SLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
AKRP ++V PGR+ HI S++K+K+LV+DEAD+L F ++ + LP
Sbjct: 129 AKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDYLIEKLPK 188
Query: 771 KRQXLLFSAT 800
+R +LFSAT
Sbjct: 189 QRTTMLFSAT 198
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 142 bits (345), Expect = 8e-33
Identities = 77/182 (42%), Positives = 105/182 (57%), Gaps = 2/182 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE--DPYG 455
L+K +L G PTPIQ+ I +L G D +G A+TGSGKT AF +P+IQ L + G
Sbjct: 241 LLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVG 300
Query: 456 IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGR 635
+ A++L+PT ELA Q Q +LR ++ GG ++ LA+ P I++A PGR
Sbjct: 301 VRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGR 360
Query: 636 LADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSATXHLMC 815
L H+ SL K++Y+V DEADRLF F +L I S L RQ LLFSAT +
Sbjct: 361 LMHHLLETG-MSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSENRQTLLFSATLPSLL 419
Query: 816 VN 821
V+
Sbjct: 420 VD 421
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 141 bits (342), Expect = 2e-32
Identities = 74/188 (39%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LGV+ WLIK ++ I PT IQ+ C+ ++ G + IG+++TGSGKT + I+Q
Sbjct: 72 FEELGVEDWLIKISKSVHILYPTKIQQLCLPLIIQGKNVIGSSETGSGKTICYCWSILQE 131
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L ++ YGIF+L+L PT EL +QI +QF + G + + + GG IE+ + +PHI
Sbjct: 132 LNKNVYGIFSLILLPTRELVFQIIEQFHLYGSKIGVMILSCIGGFSLIEQRKSVMTKPHI 191
Query: 615 VVAMPGRLADHI-SGCDTFS-LKKIKYLVLDEADRLFSESFXXRLETIFSALP----SKR 776
+V PGR++D + S D + K++++LVLDEAD L + F +L+ I + LP ++R
Sbjct: 192 IVGTPGRISDILESSIDIQNCFKRLRFLVLDEADLLLQKCFEDKLQNILNNLPKNYANER 251
Query: 777 QXLLFSAT 800
+ L FS+T
Sbjct: 252 KTLFFSST 259
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 140 bits (339), Expect = 4e-32
Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 2/192 (1%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
M + ++F LG+ WL+K + + P PIQ I LL G + + +++TGSGKT A
Sbjct: 1 MNSGEYQKFEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAA 60
Query: 411 FALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
F+ PI+Q L++DPYGIFA++LT ELA QIA+Q I G + LR+ ++ GG ++
Sbjct: 61 FSFPILQTLSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVK 120
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFS--LKKIKYLVLDEADRLFSESFXXRLETIFSAL 764
L + PHI+V PGR A+ +S F +K +KY +LDE DRL ++ ++
Sbjct: 121 LLGQIPHIIVGTPGRCAELLSIDVNFQKYIKNVKYFILDEVDRLLEPQIWDDIKKVYEQC 180
Query: 765 PSKRQXLLFSAT 800
S Q L SAT
Sbjct: 181 ESP-QIALVSAT 191
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 140 bits (338), Expect = 6e-32
Identities = 81/184 (44%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF+ L + P L+ + LG T TPIQ+ I LL G D IG AKTGSGKT AF+LPI+
Sbjct: 48 EFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILN 107
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRP 608
+ D + AL+L PT ELA Q+ + LG+ L L+V +TGG E++ L
Sbjct: 108 KINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGV 167
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
IVV PGRLAD + G + L +K +VLDEAD++ F ++T+ LP RQ +L
Sbjct: 168 QIVVGTPGRLADFV-GRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVL 226
Query: 789 FSAT 800
FSAT
Sbjct: 227 FSAT 230
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 140 bits (338), Expect = 6e-32
Identities = 80/182 (43%), Positives = 103/182 (56%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA L + P + L G PTPIQ I L G D IG A TG+GKT AF LP+I
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDR 65
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
LA P G ALVL PT ELA QI ++ G ++R ++ GG +++ L ++ I
Sbjct: 66 LAGKP-GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREI 124
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
V+A PGRL DH+ + L I+ LVLDEADR+ F +L+ I LP +RQ LLFS
Sbjct: 125 VIATPGRLVDHLEQGNA-RLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFS 183
Query: 795 AT 800
AT
Sbjct: 184 AT 185
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 138 bits (335), Expect = 1e-31
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F P +++ + G + TP+Q+ I + G+D + +A+TG+GKT AFALPI+Q
Sbjct: 2 KFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQ 61
Query: 432 HLAEDPYGIF-----ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+ E P + AL+LTPT ELA Q+AD + + + + V + GG ++ KL
Sbjct: 62 KMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKL 121
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
+ I+VA PGRL +HI C+ SL +++LVLDEADR+ F ++ I A+ KR
Sbjct: 122 KQGADIIVATPGRLLEHIVACN-LSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKR 180
Query: 777 QXLLFSAT 800
Q LLFSAT
Sbjct: 181 QNLLFSAT 188
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 138 bits (333), Expect = 2e-31
Identities = 77/185 (41%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F L + L++ TLG + PTPIQ CI LTG D +A TGSGKT AFALP ++
Sbjct: 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLER 228
Query: 435 LAEDPYGIFA---LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
L P +FA L+LTPT ELA QI L Q ++ ++ GG E+ + L
Sbjct: 229 LLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSM 288
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
P IVVA PGR+ DH+ + L + L+LDEADRL F + + P +RQ +
Sbjct: 289 PDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTM 348
Query: 786 LFSAT 800
LFSAT
Sbjct: 349 LFSAT 353
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 137 bits (332), Expect = 3e-31
Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F P ++ + G + PTPIQ I ++ G D IG A+TG+GKT A+ALPIIQ
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQK 62
Query: 435 LAEDPYG-IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
+ P G + LV+ PT ELA QI+D F LGQ ++R C + GG + ++ +L
Sbjct: 63 MLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVD 122
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+VVA PGRL DHI T + ++ L++DEADR+F F +++I L Q LLF
Sbjct: 123 VVVACPGRLLDHI-WRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 792 SAT 800
SAT
Sbjct: 182 SAT 184
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 137 bits (332), Expect = 3e-31
Identities = 80/183 (43%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ +L + L +LG T TPIQ G I LL G D +G A+TG+GKT AFALPI+ +
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLAKRPH 611
+ ALVL PT ELA Q+A+ F G+ + LR+ + GG+D ++ L + H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
IVVA PGRL DHI + L I +VLDEAD + F ++TI + P +R+ LF
Sbjct: 131 IVVATPGRLLDHIER-RSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALF 189
Query: 792 SAT 800
SAT
Sbjct: 190 SAT 192
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 137 bits (331), Expect = 4e-31
Identities = 68/173 (39%), Positives = 111/173 (64%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
++K L +LG P+ +Q+ I +LL G + + +KTGSGKT +FA+P+ +++ D I
Sbjct: 14 ILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQ 73
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLA 641
AL++ PT ELA Q+ D+ + +G+ K+R + G ++ +L +R HIVVA PGR+
Sbjct: 74 ALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRIL 133
Query: 642 DHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
DHI+ + L+ +KYLV+DEAD++F++ F ++E I LP ++ LFSAT
Sbjct: 134 DHINR-GSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSLFSAT 185
>UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_39979_41331 - Giardia lamblia
ATCC 50803
Length = 450
Score = 137 bits (331), Expect = 4e-31
Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDC--IGAAKTGSGKTFAFALPII 428
F LGV P L+ L +G PT IQK ++ + C +G A+TGSGKT AFA+P +
Sbjct: 3 FRDLGVCPELLDALERIGWLEPTAIQKEMLTVVSHNKACDVVGVAETGSGKTGAFAIPAL 62
Query: 429 QHLAE---DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
Q L E + G+ +VL+PT ELA Q F LG+ LR +V GG D +++ LA
Sbjct: 63 QDLLERGTNVKGVHTVVLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRKTLA 122
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
++PH+++ PGRL DH++ + FSLK +++L++DEAD++ + + + P +R+
Sbjct: 123 QQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKMLEQDMGRAVLNLAKDCPQRRR 182
Query: 780 XLLFSAT 800
LFSAT
Sbjct: 183 TFLFSAT 189
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 136 bits (330), Expect = 5e-31
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+EF LG+ L+K + LG PTPIQK I +L G + +G A TG+GKT A+ LP++
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKR 605
Q + L++TPT ELA Q+AD+ LG+ LK+R V GG IE ++ L +
Sbjct: 62 QRIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGG-QAIERQIRGLRQG 119
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
++V PGR+ DHI G TF +IK ++LDEAD + F +E I + L +++Q L
Sbjct: 120 VEVIVGTPGRILDHI-GRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTL 178
Query: 786 LFSAT 800
LFSAT
Sbjct: 179 LFSAT 183
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 136 bits (330), Expect = 5e-31
Identities = 80/185 (43%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ ++K L LG P+PIQ+ I L G D +G A+TG+GKT AFA PI+Q
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 435 LAED-PYG--IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
L D P G I +L+LTPT ELA QI + F G+ L LR ++ GG Q + KL K
Sbjct: 63 LGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKG 122
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
I+VA PGRL D + G L +++ VLDEADR+ F + + LP+ +Q L
Sbjct: 123 VDILVATPGRLLD-LQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTL 181
Query: 786 LFSAT 800
FSAT
Sbjct: 182 FFSAT 186
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 136 bits (330), Expect = 5e-31
Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ P L+K L +LG TPTPIQ I +LL G+D +G A+TG+GKT AF+LP++
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLAKRPH 611
+ ALVL PT ELA Q+A+ F + + V + GG+D + L + P
Sbjct: 67 IDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNPQ 126
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
++V PGR+ DH+ T L +K+LVLDEAD + F ++ I P +Q LF
Sbjct: 127 VIVGTPGRVMDHLRR-GTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTALF 185
Query: 792 SAT 800
SAT
Sbjct: 186 SAT 188
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 136 bits (329), Expect = 7e-31
Identities = 79/189 (41%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
+D F+ LG+ ++ +LG + P PIQ I + D G A+TGSGKT A+ L
Sbjct: 3 DDSYTFSDLGLCQPMVDACKSLGWKYPMPIQIKTIPPAIEKKDICGTAETGSGKTGAYML 62
Query: 420 PIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
PI H+ E+P+ FALV PT ELA QI +G+ +K+RVC + GG D+ + L
Sbjct: 63 PIFHHMWENPHSFFALVFAPTRELATQIDHVTRDIGKDIKVRVCTIIGGVDEDSQVKALK 122
Query: 600 KRPHIVVAMPGRLADHI-SGCDTFSLKKIKYLVLDEADRLFSE-SFXXRLETIFSALPSK 773
+PH+VVA PGRLA I + L K++ LV DEAD + E SF ++ I S L S
Sbjct: 123 AQPHVVVATPGRLARLIRNNPKVIPLNKVECLVFDEADNMLREPSFQTDIQLILSKLNST 182
Query: 774 RQXLLFSAT 800
Q LFSAT
Sbjct: 183 HQTYLFSAT 191
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 136 bits (329), Expect = 7e-31
Identities = 72/176 (40%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGI- 458
L+K + +G + PTPIQK CI L G D A TG+GKT AFALP+++ L P
Sbjct: 229 LLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAP 288
Query: 459 --FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPG 632
LVL PT EL Q+ L Q + C+ GG D + L P I++A PG
Sbjct: 289 VTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPG 348
Query: 633 RLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
RL DH+ C +F L I+ L+LDEADR+ E F +++ I RQ +LFSAT
Sbjct: 349 RLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSAT 404
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 136 bits (328), Expect = 9e-31
Identities = 71/182 (39%), Positives = 104/182 (57%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F L + ++K L +G P+PIQ I LL G D IG A+TG+GKT AF +PI++
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L + ALVLTPT ELA Q+A++ T +G+ +++ + GG + L +
Sbjct: 68 LVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDV 127
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
V+ PGR+ DH+ G T L +++ +VLDEAD + F +E I P++RQ LLFS
Sbjct: 128 VIGTPGRILDHL-GRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFS 186
Query: 795 AT 800
AT
Sbjct: 187 AT 188
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 136 bits (328), Expect = 9e-31
Identities = 78/183 (42%), Positives = 105/183 (57%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+K +++ L LG P+PIQ CI LL G D +G A+TGSGKT AF+LP++Q+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRPH 611
L + LVL PT ELA Q+A+ T + ++ + V + GG + L + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQ 127
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
IVV PGRL DH+ T L K+ LVLDEAD + F +ETI + +P Q LF
Sbjct: 128 IVVGTPGRLLDHLKR-GTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALF 186
Query: 792 SAT 800
SAT
Sbjct: 187 SAT 189
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 135 bits (326), Expect = 2e-30
Identities = 77/185 (41%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA L ++P L++ L LG PTPIQ+ + L+ G D +G A TG+GKT AFALP++
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 435 LAED---PYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
L +D +G ALVL PT ELA Q+++ G+ L RV V GG+ + L +
Sbjct: 119 LTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQG 178
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
+VVA PGR DH+ G T L + +VLDEAD + F ++ I P KRQ +
Sbjct: 179 VDVVVATPGRALDHM-GRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTV 237
Query: 786 LFSAT 800
LFSAT
Sbjct: 238 LFSAT 242
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 134 bits (325), Expect = 2e-30
Identities = 81/191 (42%), Positives = 107/191 (56%), Gaps = 1/191 (0%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
MT+ G FA LG+ P ++ + +G P+PIQ I +L G D IG A+TG+GKT A
Sbjct: 18 MTQETGG-FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAA 76
Query: 411 FALPIIQHLAEDPYGIFALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIEES 587
FALP++ + L+L PT ELA Q+A F T Q + V V GG+ +
Sbjct: 77 FALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQL 136
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L + I+VA PGRL DH+ D L +K+LVLDEAD + F LE IF+ALP
Sbjct: 137 KALRQGAQILVATPGRLCDHLRR-DEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALP 195
Query: 768 SKRQXLLFSAT 800
RQ +LFSAT
Sbjct: 196 ESRQTVLFSAT 206
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 134 bits (325), Expect = 2e-30
Identities = 76/197 (38%), Positives = 108/197 (54%), Gaps = 8/197 (4%)
Frame = +3
Query: 234 TENDGKE-----FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSG 398
TEN GK+ F + + +++ L ++G PTPIQ I L G D +G A TGSG
Sbjct: 266 TENVGKKGGLSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSG 325
Query: 399 KTFAFALPIIQHLAEDPYGI---FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGS 569
KT AF +PI++ L P + +VLTPT ELA Q T L ++ C+ GG
Sbjct: 326 KTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGL 385
Query: 570 DQIEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLET 749
+ +L RP +V+A PGR DH+ +F+++ ++ LVLDEADR+ + F L
Sbjct: 386 SLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNE 445
Query: 750 IFSALPSKRQXLLFSAT 800
I + LP RQ +LFSAT
Sbjct: 446 ILTTLPKSRQTMLFSAT 462
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 134 bits (324), Expect = 3e-30
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Frame = +3
Query: 240 NDGKE-FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
ND + F G ++ L G + PTPIQK I L+ G D +G A+TG+GKT AFA
Sbjct: 47 NDNENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFA 106
Query: 417 LPIIQHLAED-PYGIFALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIEESL 590
LP+I+ LA++ LV+TPT ELA Q+A+ F + + + + GG+D +
Sbjct: 107 LPLIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIY 166
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
L ++ +VV PGR+ DHI TF + I LVLDEAD + + F +E I LP
Sbjct: 167 ALKRKVDVVVGTPGRIMDHIRQ-GTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPK 225
Query: 771 KRQXLLFSAT 800
+Q +LFSAT
Sbjct: 226 NKQMVLFSAT 235
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 134 bits (324), Expect = 3e-30
Identities = 84/187 (44%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA L + P L L LG PTPIQ I +L GDD + A+TG+GKT +FALPII+
Sbjct: 6 FAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEK 65
Query: 435 LAEDPYG----IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
L+++P + ALVL PT ELA Q+AD G+ L +RV V GG +E +K K
Sbjct: 66 LSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGV-PVENQIKRLK 124
Query: 603 R-PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
R I+VA PGRL D + SL+K++YLVLDEADR+ F ++ I RQ
Sbjct: 125 RGTDILVATPGRLLDLLRQ-KAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQ 183
Query: 780 XLLFSAT 800
LLF+AT
Sbjct: 184 TLLFTAT 190
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 134 bits (324), Expect = 3e-30
Identities = 81/188 (43%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F LG+ L+K L G PTPIQ I +++G D +G A+TG+GKT AFALPI+
Sbjct: 66 QFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILH 125
Query: 432 HLAEDP-----YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
LAED G LVL+PT ELA QIA+ F G+ + L V + GG + L
Sbjct: 126 RLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKAL 185
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
A +VVA PGRL DH+ G + L ++ VLDEAD++ F + I S LP +R
Sbjct: 186 AAGVDVVVATPGRLMDHL-GEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKER 244
Query: 777 QXLLFSAT 800
Q L FSAT
Sbjct: 245 QNLFFSAT 252
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 134 bits (324), Expect = 3e-30
Identities = 71/182 (39%), Positives = 106/182 (58%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ ++K + +G TPIQ I L D IG A+TG+GKT AF +PI++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
+ + ALV+ PT ELA Q++++ +G ++RV + GG D + L K PH+
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHV 123
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
+V PGR+ DHI+ T L+ + +VLDEAD + + F +E I S +P++RQ LLFS
Sbjct: 124 IVGTPGRIIDHINR-GTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFS 182
Query: 795 AT 800
AT
Sbjct: 183 AT 184
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 133 bits (322), Expect = 5e-30
Identities = 80/188 (42%), Positives = 106/188 (56%), Gaps = 6/188 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ L L LG TPTPIQ+ I LL G D + AA+TG+GKT A+ LP+IQ
Sbjct: 5 FIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQM 64
Query: 435 LAED------PYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
L+ P AL+L PT ELA Q+ D Q +L + V GG+ + +L
Sbjct: 65 LSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQL 124
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
AK I++A PGRL DH+ T SL +++ LVLDEADR+ F ++ I +P +R
Sbjct: 125 AKGVDILIATPGRLLDHLFTKKT-SLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEER 183
Query: 777 QXLLFSAT 800
Q LLFSAT
Sbjct: 184 QTLLFSAT 191
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 133 bits (322), Expect = 5e-30
Identities = 76/184 (41%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG++ L++ L + I TPTP+Q+ I +L G D + AA+TG+GKT AF LPIIQ
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 435 LAEDPYG--IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
+ + AL+L PT ELA Q+ D T + LR+ V GG+ + KL +
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
I++A PGRL DH+ ++ K LVLDEADR+ F L+ I LP+ +Q +L
Sbjct: 129 DILIATPGRLLDHLFN-GNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQIML 187
Query: 789 FSAT 800
FSAT
Sbjct: 188 FSAT 191
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 133 bits (322), Expect = 5e-30
Identities = 76/185 (41%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F LG+ L GI TPIQ+ I +L+G D IG AKTG+GKT AF LPI+
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
+ + + + AL++ PT ELA QI + +L Q + V + GG D ++ KL
Sbjct: 65 EKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGN 124
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
HIVVA PGRL DHI +T L + +VLDEAD++ F +E I P +Q +
Sbjct: 125 THIVVATPGRLLDHIRR-ETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTM 183
Query: 786 LFSAT 800
LFSAT
Sbjct: 184 LFSAT 188
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 133 bits (322), Expect = 5e-30
Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 8/190 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F G+ ++K + G TPTPIQ I +L+G D +GAA+TG+GKT +F+LPIIQ
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 435 L------AEDP--YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
L + P + + AL+LTPT ELA Q+A + LR +V GG D +
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
+L + I++A PGRL DH+ T +L +++ LVLDEADR+ F L+ I + LP
Sbjct: 133 ELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191
Query: 771 KRQXLLFSAT 800
+RQ LLFSAT
Sbjct: 192 ERQTLLFSAT 201
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 133 bits (322), Expect = 5e-30
Identities = 69/183 (37%), Positives = 103/183 (56%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F L + P +++ + +G TPIQ+ I + G D IG A+TG+GKT AF +P+++
Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
+ G+ LV+ PT ELA Q+A++ T +G+ +R + GG D + L + PH
Sbjct: 63 AIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPH 122
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
IVV PGRL +H+ + I+ VLDEAD++ F E I LP +RQ LLF
Sbjct: 123 IVVGTPGRLLEHMRR-EYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLF 181
Query: 792 SAT 800
SAT
Sbjct: 182 SAT 184
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 133 bits (322), Expect = 5e-30
Identities = 68/182 (37%), Positives = 104/182 (57%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ L++ + ++G TPIQ I L G D IG A+TG+GKT AF LP++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
+ + +V+ PT ELA Q+ ++ +G+ ++R+ + GG D + L K PHI
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
+V PGR+ DHI+ T L+ ++ +VLDEAD + + F +E I + +P Q LLFS
Sbjct: 124 IVGTPGRILDHINR-KTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 795 AT 800
AT
Sbjct: 183 AT 184
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 133 bits (321), Expect = 6e-30
Identities = 74/194 (38%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K+ E + F L + L+K + LG PTPIQ I L G D + +A TGSGKT
Sbjct: 183 KIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTA 242
Query: 408 AFALPIIQHLA--EDPY-GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQI 578
AF LP+++ L + Y I L+L PT ELA Q L Q + C++ GG
Sbjct: 243 AFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNK 302
Query: 579 EESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFS 758
+ ++L K P +V+A PGRL DH+ L ++ L+LDEADRL F + I
Sbjct: 303 AQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVE 362
Query: 759 ALPSKRQXLLFSAT 800
+ P+ RQ +LFSAT
Sbjct: 363 SCPTNRQTMLFSAT 376
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 132 bits (320), Expect = 9e-30
Identities = 77/175 (44%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY--G 455
++K L G +PTPIQ+ I LL G D +G A+TG+GKT AF++PI+Q L + + G
Sbjct: 12 ILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKG 71
Query: 456 IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGR 635
I ALVLTPT ELA QI + F G+ L+ ++ GG Q ++ L I+VA PGR
Sbjct: 72 IKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGR 131
Query: 636 LADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L D IS SL + + VLDEADR+ F ++ I LP++RQ L FSAT
Sbjct: 132 LLDLISQ-GFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLFFSAT 185
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 132 bits (320), Expect = 9e-30
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F + +++ L ++G TPTPIQ+ I L G D +G A TGSGKT AF +PI+
Sbjct: 305 KSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPIL 364
Query: 429 QHLAEDPYGI---FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
+ L P + +L PT ELA Q + T L + C + GG E+ L
Sbjct: 365 ERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQENILK 424
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
KRP +++A PGR DH+ +F++ ++ LVLDEADR+ + F L I + +P RQ
Sbjct: 425 KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQ 484
Query: 780 XLLFSAT 800
+LFSAT
Sbjct: 485 TMLFSAT 491
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 132 bits (319), Expect = 1e-29
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
++F+ + + L+ G TPT IQK I L+G D +GAAKTGSGKT AF +PII
Sbjct: 50 EKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPII 109
Query: 429 QHLAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+ L + G+ ALV++PT ELAYQ + +G L ++ GG D E ++
Sbjct: 110 ETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRI 169
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
K +IVV PGRL H+ F ++ LVLDEADR+ F L I LPS+R
Sbjct: 170 MKT-NIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSER 228
Query: 777 QXLLFSAT 800
Q LL+SAT
Sbjct: 229 QTLLYSAT 236
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 132 bits (318), Expect = 1e-29
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F +G+K L++ + G PTPIQ I + G D +G A+TG+GKT +F +PI+
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKR 605
+ + G+ ALVL PT ELA Q+ ++ + L + ++++V + GG IE L+ L +
Sbjct: 64 NRVIKGE-GLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQS-IELQLRSLRRN 121
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
P I+V PGRL DH++ T SL +KY+VLDEAD + F ++ I S P +RQ
Sbjct: 122 PEIIVGTPGRLMDHMNR-GTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTF 180
Query: 786 LFSAT 800
LFSAT
Sbjct: 181 LFSAT 185
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 132 bits (318), Expect = 1e-29
Identities = 80/193 (41%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Frame = +3
Query: 234 TENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAF 413
T D K F L + L + LG + PTPIQ I +TG D G A TGSGKT AF
Sbjct: 143 TTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAF 202
Query: 414 ALPIIQ---HLAEDPYGI-FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
LP ++ H P LVL PT ELA Q+ L Q +R +V GG
Sbjct: 203 MLPQLERMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANV 262
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
++ L RP IVVA PGR+ DH+ +F L+ + L+LDEADRL F ++ I
Sbjct: 263 QAAALRTRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEIVRQ 322
Query: 762 LPSKRQXLLFSAT 800
P KRQ LLFSAT
Sbjct: 323 CPKKRQTLLFSAT 335
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 132 bits (318), Expect = 1e-29
Identities = 72/193 (37%), Positives = 106/193 (54%), Gaps = 2/193 (1%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K+ + K + LG+ L+K + + PT IQ I L G D + ++ TGSGKT
Sbjct: 183 KLNKKKKKTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTA 242
Query: 408 AFALPIIQHLAEDPYGIF--ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
AF +PI+Q P+ + AL++TPT ELA+QI + FT L + KLR C+V G S +
Sbjct: 243 AFLIPILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQK 302
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
+ +L P +++A PGRL DH+ + L ++ L+ DEAD+L F + I
Sbjct: 303 QEAELRGNPEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLDLGFEAAAQNIVEN 362
Query: 762 LPSKRQXLLFSAT 800
+RQ LLFSAT
Sbjct: 363 CNRERQTLLFSAT 375
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 132 bits (318), Expect = 1e-29
Identities = 72/176 (40%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGI- 458
++K L LG PT IQ I L G D +GAA TGSGKT AF +PI++ L P +
Sbjct: 270 ILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVP 329
Query: 459 --FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPG 632
L+L PT ELA Q T + + VC+ GG + +L KRP IV+A PG
Sbjct: 330 TTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPG 389
Query: 633 RLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
R DH+ F+++ I+ +V+DEADR+ + F L I A P RQ +LFSAT
Sbjct: 390 RFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSAT 445
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 132 bits (318), Expect = 1e-29
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Frame = +3
Query: 246 GKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPI 425
G F +G+ L+K + G + PTPIQ+ + +L GDD +G A+TGSGKT AF +P+
Sbjct: 77 GGGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPM 136
Query: 426 IQHLA--EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
I+ L G ++++P+ ELA Q G+ LR ++ GG E+ +
Sbjct: 137 IERLKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMT 196
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
P I++A PGR H+ L ++Y+V DEADRLF F +L I ALP+ RQ
Sbjct: 197 TNPDIIIATPGRFL-HLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALPTSRQ 255
Query: 780 XLLFSAT 800
LLFSAT
Sbjct: 256 TLLFSAT 262
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 131 bits (317), Expect = 2e-29
Identities = 76/185 (41%), Positives = 99/185 (53%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F G P L++ + +G PTPIQ+ C +L G D + A+TGSGKT F LP+I+
Sbjct: 6 FQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIER 65
Query: 435 LA---EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
L GI +VL+PT ELA Q L L VC +TGGS + L+
Sbjct: 66 LGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSGN 125
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
P IVVA PGRL HI SL +K ++LDEADRLF ++E I ++P RQ +
Sbjct: 126 PDIVVATPGRLFHHIIEAG-LSLIAVKIIILDEADRLFEMGLASQIEKILESIPKNRQCV 184
Query: 786 LFSAT 800
L SAT
Sbjct: 185 LVSAT 189
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 131 bits (317), Expect = 2e-29
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F L + ++K L +LG P+PIQ I L G D I A TGSGKT AF +PII
Sbjct: 231 ENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPII 290
Query: 429 QHLAEDPYGIFA---LVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKL 596
+ L P I + +VL PT ELA Q+AD + + + + + GG + ++ L
Sbjct: 291 ERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQML 350
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
RP IV+A PGR DHI +F++ ++ LV+DEADR+ E F L I LPS R
Sbjct: 351 KSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNR 410
Query: 777 QXLLFSAT 800
Q LLFSAT
Sbjct: 411 QNLLFSAT 418
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 131 bits (317), Expect = 2e-29
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ +++K + LG TP+PIQ+ CI LL G+D +G A+TGSGKT AFALP++
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRPH 611
+ LV+ PT ELA Q+AD + + + R+ + GG + L +
Sbjct: 67 IDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQ 126
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+VV PGR+ DHI T +L +++++VLDEAD + F +ET+ + LP Q LF
Sbjct: 127 VVVGTPGRILDHIRR-GTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALF 185
Query: 792 SAT 800
SAT
Sbjct: 186 SAT 188
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 131 bits (317), Expect = 2e-29
Identities = 76/191 (39%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Frame = +3
Query: 234 TENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAF 413
T G F +G+ L+K + G PTPIQ+ I ++ D +G A+TGSGKT AF
Sbjct: 86 TVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAF 145
Query: 414 ALPIIQHLA--EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEES 587
+P+I+ L +G L+L+P+ ELA Q LG+ L+ ++ GG E+
Sbjct: 146 VIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQF 205
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
+A P IV+A PGR H+ L IKY+V DEADRLF F +L I LP
Sbjct: 206 GMMAGNPDIVIATPGRFL-HLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLP 264
Query: 768 SKRQXLLFSAT 800
S RQ LLFSAT
Sbjct: 265 STRQTLLFSAT 275
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 131 bits (316), Expect = 3e-29
Identities = 75/175 (42%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYG-I 458
++ + T G RT TPIQ I +L G D +G A+TG+GKT A+ALP++Q L E P G +
Sbjct: 24 ILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQL 83
Query: 459 FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP-HIVVAMPGR 635
AL+L+PT +LA QI G+ LR + GG +L I+VA PGR
Sbjct: 84 RALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQLLTGGVDIIVACPGR 143
Query: 636 LADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L D + G L+++K+LVLDEAD LF F + I LP +RQ LLFSAT
Sbjct: 144 LLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPRRQNLLFSAT 198
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 131 bits (316), Expect = 3e-29
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGI- 458
L+K + + PTPIQK CI L G D A TG+GKT AF LP+++ L P
Sbjct: 192 LLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLERLIYKPREAP 251
Query: 459 --FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPG 632
LVL PT EL Q+ L Q ++ C+ GG D + L P +++A PG
Sbjct: 252 VTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAALRSGPDVLIATPG 311
Query: 633 RLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
RL DH+ C +FSL I+ L+LDEADR+ E F +++ I +RQ LLFSAT
Sbjct: 312 RLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRLCSHQRQTLLFSAT 367
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 131 bits (316), Expect = 3e-29
Identities = 77/193 (39%), Positives = 101/193 (52%), Gaps = 2/193 (1%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K F +G+ L++ + G + PTPIQ+ I LL G D +G A+TGSGKT
Sbjct: 62 KKGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTA 121
Query: 408 AFALPIIQHLAED--PYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
AF +P+I+HL AL+L+P ELA Q + LR + GG E
Sbjct: 122 AFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEE 181
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
+ L+ +P IVVA PGR H+ L I+Y+V DEADRLF F +L I A
Sbjct: 182 QFSLLSGKPDIVVATPGRFL-HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHA 240
Query: 762 LPSKRQXLLFSAT 800
LP+ RQ LLFSAT
Sbjct: 241 LPTSRQTLLFSAT 253
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 130 bits (315), Expect = 3e-29
Identities = 70/182 (38%), Positives = 105/182 (57%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F + + P L+ L + I PTP+Q I L G D I A+TGSGKT AFAL ++
Sbjct: 35 FQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLTT 94
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L + P L+L P+ E+A QI F L + + VC+ GG+ +++ +L K P +
Sbjct: 95 LQKKPEAR-GLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPRL 153
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
++A PGR+ DH+SG + L+ ++ +VLDEADR+ F +L TI S L RQ ++FS
Sbjct: 154 IIATPGRMNDHLSG-NKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMFS 212
Query: 795 AT 800
A+
Sbjct: 213 AS 214
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 130 bits (315), Expect = 3e-29
Identities = 79/197 (40%), Positives = 110/197 (55%), Gaps = 5/197 (2%)
Frame = +3
Query: 225 VKMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKT 404
V+ ++D F+ LG+ ++K L LG PTPIQ I +L D +G A+TG+GKT
Sbjct: 95 VEQPKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKT 154
Query: 405 FAFALPIIQHLAEDPYGI-----FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGS 569
AFALP+IQ L +P I A++L+PT ELA QI + F G+ L L GG+
Sbjct: 155 AAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGA 214
Query: 570 DQIEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLET 749
++ L+K I+VA PGRL D + L + K+LVLDEAD++ F ++
Sbjct: 215 PIRKQMRDLSKGVDILVATPGRLEDLVDQ-KGLRLDETKFLVLDEADQMLDIGFLPAVKR 273
Query: 750 IFSALPSKRQXLLFSAT 800
I S + RQ LLFSAT
Sbjct: 274 IISKVNKDRQTLLFSAT 290
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 130 bits (315), Expect = 3e-29
Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F L + P + + G + PTPIQ+ + +L+G D + A+TGSGKT AF +P+++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 435 LAED-PYG-IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L + P G + AL+L+PT +LA Q LG+ LRV ++ GG ++ +L K P
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+++A PGRL +S D +L+ ++Y+V DEAD LF F +L I + L RQ LL
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
Query: 789 FSAT 800
FSAT
Sbjct: 210 FSAT 213
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 130 bits (314), Expect = 5e-29
Identities = 75/185 (40%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ FA L ++ L+ L +G TP+PIQ CI LL G D +G A+TG+GKT AFALP++
Sbjct: 44 ESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLL 103
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKR 605
L LVL PT ELA Q+A+ F + L V V GG + + +LA+
Sbjct: 104 DRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARG 163
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
H++V PGR+ DHI + +L + LVLDEAD + F +E I P++RQ
Sbjct: 164 AHVIVGTPGRVMDHIER-KSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTA 222
Query: 786 LFSAT 800
LFSAT
Sbjct: 223 LFSAT 227
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 130 bits (314), Expect = 5e-29
Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ L++ L L + PTP+Q I +L G D + A+TG+GKT FALP++Q
Sbjct: 3 FASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQR 62
Query: 435 LAEDPYGIFA-----LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
L + + + LVL PT ELA Q+ F G+ L LR GG + +KL
Sbjct: 63 LVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKLR 122
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
K ++VA PGRL D ++ + +++ LVLDEADR+ F L +F+ALP++RQ
Sbjct: 123 KGVDVLVATPGRLLD-LNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQ 181
Query: 780 XLLFSAT 800
LLFSAT
Sbjct: 182 TLLFSAT 188
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 130 bits (314), Expect = 5e-29
Identities = 80/186 (43%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF +KP +++ L G+ TPTPIQ + L G D IG A+TG+GKT AFALPI +
Sbjct: 2 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAE 61
Query: 432 HLA---EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
LA E ALVLTPT ELA Q+A + T + LK V V GG+ ++ L +
Sbjct: 62 RLAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLK--VVAVYGGTGYGKQKEALLR 119
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
VVA PGR D++ L +++ VLDEAD + S F +E + SA P RQ
Sbjct: 120 GADAVVATPGRALDYLRQ-GVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQT 178
Query: 783 LLFSAT 800
LLFSAT
Sbjct: 179 LLFSAT 184
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 130 bits (314), Expect = 5e-29
Identities = 76/176 (43%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Frame = +3
Query: 288 KQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAED-----PY 452
K L+ + PTPIQ I L G D +G A+TG+GKT A ALPI+ L ++ P+
Sbjct: 15 KALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPH 74
Query: 453 GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPG 632
ALVL PT ELA QI D F G+ LKLR ++ GG Q + L + HI+VA PG
Sbjct: 75 HPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPG 134
Query: 633 RLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
RL D + L +++ VLDEADR+ F L+ I + LP++RQ L FSAT
Sbjct: 135 RLLD-LMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQSLFFSAT 189
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 130 bits (314), Expect = 5e-29
Identities = 68/173 (39%), Positives = 103/173 (59%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
L+K + +G TPIQ I L+ D IG A+TG+GKT AF +P+++ + + I
Sbjct: 14 LMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQ 73
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLA 641
A+V+ PT ELA Q++++ +GQ + +V + GG D + L K P+I+V PGRL
Sbjct: 74 AIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLL 133
Query: 642 DHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
DHI+ T L + +V+DEAD + + F +E+I S +PS+ Q LLFSAT
Sbjct: 134 DHINR-RTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSAT 185
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 130 bits (313), Expect = 6e-29
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Frame = +3
Query: 276 PWLIKQLLTLG-IRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY 452
P L+ Q L PTP+Q I L G D +G+A+TG+GKT AFA+P+I L +P
Sbjct: 10 PLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIAKLLGEPN 69
Query: 453 GIFALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMP 629
ALV+ PT ELA Q+ ++ +L + L++ ++ GG + +L +RP IV+ P
Sbjct: 70 ASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRRPRIVIGTP 129
Query: 630 GRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
GR+ DHI T + LVLDE DR+F F ++E I LP RQ L+FSAT
Sbjct: 130 GRIIDHIER-KTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNLMFSAT 185
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 130 bits (313), Expect = 6e-29
Identities = 81/197 (41%), Positives = 107/197 (54%), Gaps = 7/197 (3%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
M+ + FA L + P L++ L G PTPIQ I LL G D +G A+TG+GKT +
Sbjct: 1 MSPTSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTAS 60
Query: 411 FALPIIQHLAEDP-----YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQ 575
FALP++ LA P G LVL PT EL QIAD F + +RV + GG Q
Sbjct: 61 FALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQ 120
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISG--CDTFSLKKIKYLVLDEADRLFSESFXXRLET 749
+ + L + I+VA PGRL D I CD L +++ LVLDEAD++ F +E
Sbjct: 121 VHQVKALEEGVDIIVAAPGRLLDLIEQGLCD---LSQLETLVLDEADQMLDMGFAKPIER 177
Query: 750 IFSALPSKRQXLLFSAT 800
I + LP R +LFSAT
Sbjct: 178 IVATLPEDRHTVLFSAT 194
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 130 bits (313), Expect = 6e-29
Identities = 76/185 (41%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ P +++ L LG +PTPIQK I ++ G D +G A+TG+GKT F LP++
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHK 62
Query: 435 LAED-PYGI--FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
+AE +GI ALVL+PT ELA QI + L ++ GG D I + L +
Sbjct: 63 IAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKRN 122
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
IVVA PGRL DH+ + +L +++DEADR+ F + TI LP RQ L
Sbjct: 123 WDIVVATPGRLLDHVRR-NNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSL 181
Query: 786 LFSAT 800
LFSAT
Sbjct: 182 LFSAT 186
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 130 bits (313), Expect = 6e-29
Identities = 74/188 (39%), Positives = 108/188 (57%), Gaps = 6/188 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ P +++ + G R PTPIQ+ I +L G D + +A+TG+GKT F LP++QH
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 435 L-AEDPYG-----IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
L P+ + AL+LTPT ELA QI + + L +R +V GG + +KL
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
++VA PGRL D + + L +++ LVLDEADR+ F + + + LP+KR
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 777 QXLLFSAT 800
Q LLFSAT
Sbjct: 182 QNLLFSAT 189
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 130 bits (313), Expect = 6e-29
Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 3/176 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGI- 458
+++ L ++G PTPIQ I L G D +G A TGSGKT AF +PI++ L P +
Sbjct: 304 ILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVP 363
Query: 459 --FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPG 632
++LTPT ELA Q L ++ C+ GG + +L RP +V+A PG
Sbjct: 364 TTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPG 423
Query: 633 RLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
R DH+ +F++ I+ LVLDEADR+ + F L I + LP RQ +LFSAT
Sbjct: 424 RFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSAT 479
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 129 bits (312), Expect = 8e-29
Identities = 72/188 (38%), Positives = 109/188 (57%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
+ D + F V G+K +++K + G TP+P+Q I +L G D I A+TG+GKT AFA
Sbjct: 41 KQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFA 100
Query: 417 LPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+PI+ L + I AL++TPT ELA QI+++ LG+ +++ + GG + L
Sbjct: 101 IPILNTLNRNK-DIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLL 159
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
K+P ++A PGRL DH+ + + +VLDE+D + F +E IF LP+ R
Sbjct: 160 EKKPKAMIATPGRLLDHLQN-GRIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTR 218
Query: 777 QXLLFSAT 800
Q LLFSAT
Sbjct: 219 QTLLFSAT 226
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 129 bits (312), Expect = 8e-29
Identities = 73/183 (39%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ L K L + TP+PIQ I +L G D I A+TG+GKT AFALPI+Q+
Sbjct: 8 FSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQN 67
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQ-PLKLRVCIVTGGSDQIEESLKLAKRPH 611
L+ + AL+L PT ELA Q+A+QF +L + + + ++ GG + + +L
Sbjct: 68 LSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQ 127
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+VV PGR+ DHI T L +K +LDEAD + F +ETI LP K+Q LF
Sbjct: 128 VVVGTPGRILDHIDK-GTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMALF 186
Query: 792 SAT 800
SAT
Sbjct: 187 SAT 189
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 129 bits (312), Expect = 8e-29
Identities = 78/184 (42%), Positives = 102/184 (55%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F LG++ +++ + PT IQK I +L G D IG A TGSGKT AF II
Sbjct: 2 ESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGII 61
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
Q + E GI ALVLTPT ELA Q+ + + +LRV + GG I ++ +R
Sbjct: 62 QKI-EKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGV-AINPQIRQLERA 119
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+VVA PGRL DHI T L ++ LVLDEADR+ F +E I PS RQ ++
Sbjct: 120 DVVVATPGRLLDHIER-GTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMM 178
Query: 789 FSAT 800
FSAT
Sbjct: 179 FSAT 182
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 129 bits (312), Expect = 8e-29
Identities = 69/167 (41%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Frame = +3
Query: 306 GIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYG--IFALVLTP 479
G R PTPIQ+ + +L G D A+TGSGKT AF +P+IQ L G I AL+L+P
Sbjct: 68 GYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSP 127
Query: 480 THELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGC 659
T +LA Q LG+ L++ ++ GG + +LA+ P I++A PGRL H++
Sbjct: 128 TRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEV 187
Query: 660 DTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ +L+ ++Y+V DEAD LFS +L I L RQ LLFSAT
Sbjct: 188 EDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTLLFSAT 234
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 129 bits (312), Expect = 8e-29
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ ++K + G + PTPIQ+ I +L G D +G A+TGSGKT AF LP+++
Sbjct: 104 FAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEK 163
Query: 435 LA--EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKR 605
L G A++L+P+ ELA Q LR+ ++ GG D +EE K +
Sbjct: 164 LKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGG-DSLEEQFKMMMSN 222
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
P I++A PGR H+ SL ++Y+ DEADRLF F ++ + ++LPS RQ L
Sbjct: 223 PDIIIATPGRFL-HLKVEMELSLASVEYICFDEADRLFELGFGEQMNELLASLPSNRQTL 281
Query: 786 LFSAT 800
LFSAT
Sbjct: 282 LFSAT 286
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 129 bits (311), Expect = 1e-28
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G+ + +L G R PTPIQ+ I +L G+D I A+TGSGKT A+ +PII
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 435 L-AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
L G+ +L++ PT ELA Q F LG+ L+ ++ GGS ++ L+ P
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
I+VA PGRL + G + SL +++ + DEAD +F F ++ I LP RQ LLF
Sbjct: 135 IIVATPGRLTFILEGAN-ISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLF 193
Query: 792 SAT 800
SAT
Sbjct: 194 SAT 196
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 129 bits (311), Expect = 1e-28
Identities = 73/182 (40%), Positives = 99/182 (54%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ ++ L LG PT IQ I +LL+G D +G ++TG+GKT AF+LPI++
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L + A+VLTPT ELA Q+ D LR + GG + L+L + HI
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHI 124
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
VV PGR+ D + L ++K+ VLDEAD + S F +E I S P RQ LFS
Sbjct: 125 VVGTPGRVIDLLER-GNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFS 183
Query: 795 AT 800
AT
Sbjct: 184 AT 185
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 129 bits (311), Expect = 1e-28
Identities = 76/182 (41%), Positives = 98/182 (53%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +K L+ L+ LG PTPIQ+ I LL G D IG A+TG+GKT AF LP++ +
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
+ + ALVL PT ELA Q+ D V +V GGS + L + +
Sbjct: 117 IDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARV 176
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
VV PGRL D I + L ++K LVLDEAD + S F +ETI S P RQ +LFS
Sbjct: 177 VVGTPGRLLDLIRQ-GSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFS 235
Query: 795 AT 800
AT
Sbjct: 236 AT 237
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 129 bits (311), Expect = 1e-28
Identities = 76/174 (43%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Frame = +3
Query: 294 LLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-----AEDPYGI 458
L T TPTPIQ I LL G D IG A+TG+GKT AFALPI+ L D
Sbjct: 11 LATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAP 70
Query: 459 FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRL 638
LVL+PT ELA QIA F + G+ +K R+ + GG Q + L + H+ +A PGRL
Sbjct: 71 QVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRL 130
Query: 639 ADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
D + L + K VLDEADR+ F L+TI S LP +RQ + F+AT
Sbjct: 131 LD-LMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFFTAT 183
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 129 bits (311), Expect = 1e-28
Identities = 73/182 (40%), Positives = 103/182 (56%), Gaps = 3/182 (1%)
Frame = +3
Query: 264 LGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-- 437
L + L + +L LG + PT +Q+ I +L G D + +A TGSGKT AF +P+++ +
Sbjct: 6 LSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLERMIL 65
Query: 438 -AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
D YG AL+L+PT ELA Q A L RV ++ GG+D +++ +L P I
Sbjct: 66 RGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLRTEPDI 125
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
+VA PGRL D + FSL I+ LVLDE D++ F L+ I + P RQ LLFS
Sbjct: 126 IVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPVARQTLLFS 185
Query: 795 AT 800
AT
Sbjct: 186 AT 187
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 128 bits (310), Expect = 1e-28
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ +++ + +G TP+PIQ I LL G D +G A+TG+GKT AFALP++
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRPH 611
+ LVL PT ELA Q+A+ F + RV V GG ++ L + H
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
++V PGR+ DH+ T L ++K LVLDEAD + F +E + LP+ RQ LF
Sbjct: 137 VIVGTPGRVIDHLER-GTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALF 195
Query: 792 SAT 800
SAT
Sbjct: 196 SAT 198
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 128 bits (310), Expect = 1e-28
Identities = 76/186 (40%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K FA + L++ + +G PTPIQ I ++L G D G A+TG+GKT AF +PII
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAK- 602
+ L D + ALVL+PT ELA Q A++F+ L + K L V + GG IE L+ K
Sbjct: 65 ERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGG-QPIERQLRALKG 123
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
+V+ PGR+ DHI T L + +LDEAD++ F +E IF P RQ
Sbjct: 124 TVQVVIGTPGRVIDHIKR-GTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQT 182
Query: 783 LLFSAT 800
+LFSAT
Sbjct: 183 ILFSAT 188
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 128 bits (310), Expect = 1e-28
Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Frame = +3
Query: 225 VKMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKT 404
++ T++ F G+ ++ + G R PTPIQ+ I +L D +G A+TGSGKT
Sbjct: 129 LEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKT 188
Query: 405 FAFALPIIQHLA--EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQI 578
AF LP+++ L G A++L+P+ ELA Q + F + +LR ++TGG
Sbjct: 189 AAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLE 248
Query: 579 EESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFS 758
E+ + P +++A PGR H+ LK ++Y+V DEADRLF F +L + +
Sbjct: 249 EQFGMMMTNPDVIIATPGRFL-HLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLA 307
Query: 759 ALPSKRQXLLFSAT 800
+LP+ RQ LLFSAT
Sbjct: 308 SLPTTRQTLLFSAT 321
>UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 624
Score = 128 bits (309), Expect = 2e-28
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Frame = +3
Query: 243 DGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALP 422
D K F + I+ L T TPIQ+ I L G D IGAA+TGSGKT AF +P
Sbjct: 87 DAKRFDQFPISKATIQLLNKNRFITMTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIP 146
Query: 423 IIQHLAEDPY----GIFALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIEES 587
+I+ + + G+ A++L+PT ELA QI D F +I G+ + ++TGG D EE+
Sbjct: 147 LIEFMYRSRWTELDGLCAIILSPTRELAQQIFDVFASIAGE--RFTAALITGGKDTKEEA 204
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
K+ + ++++ PGRL H+ F+ ++ L+LDEADR+ F L I LP
Sbjct: 205 -KVIRLMNVLICTPGRLLYHLDNTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHLP 263
Query: 768 SKRQXLLFSAT 800
+RQ +LFSAT
Sbjct: 264 KQRQTMLFSAT 274
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 128 bits (309), Expect = 2e-28
Identities = 71/185 (38%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ +++ L +G + P PIQ CI LL G D +G A TGSGKT AF LP++Q+
Sbjct: 8 FVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLLQN 67
Query: 435 LAEDPYGIFALVLTPTHELAYQIAD--QFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
+ + L++ PT ELA QI + I + + ++ GG + + L K P
Sbjct: 68 IDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFNDLKKNP 127
Query: 609 HIVVAMPGRLADHIS-GCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
HI++ PGRL DH+S G D + K+K L++DEAD + F +E I +P+ RQ
Sbjct: 128 HIIIGTPGRLLDHLSRGLD---ISKLKTLIIDEADEMLRMGFIEDIEHIIRYVPTHRQTA 184
Query: 786 LFSAT 800
LFSAT
Sbjct: 185 LFSAT 189
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 128 bits (309), Expect = 2e-28
Identities = 73/175 (41%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
+I+ L L PTPIQ+ I L G D I +KTGSGKT AFA+PI + + +
Sbjct: 15 IIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQ 74
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLA 641
ALVL PT ELAYQ+ D+ +G+ +++V +V GG +++L L ++ HIVV PGR+
Sbjct: 75 ALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHIVVGTPGRVL 134
Query: 642 DHISGCDTFSLK--KIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
DH C+T +LK +KY+++DEAD + F ++ I S LP +LFSAT
Sbjct: 135 DH---CETGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENITIMLFSAT 186
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 128 bits (309), Expect = 2e-28
Identities = 73/176 (41%), Positives = 99/176 (56%), Gaps = 1/176 (0%)
Frame = +3
Query: 276 PWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYG 455
P + + LG TPTPIQ+ I L G D IG A+TG+GKT AF LPI+Q L P G
Sbjct: 10 PQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRG 69
Query: 456 -IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPG 632
+ A+++TPT ELA QI LG+ LR + GG + +L + I V PG
Sbjct: 70 RVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPG 129
Query: 633 RLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
RL DH+ T +L+ + L+LDEAD++F F + I P++RQ +LFSAT
Sbjct: 130 RLLDHLER-GTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLFSAT 184
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 128 bits (309), Expect = 2e-28
Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 3/197 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGD-DCIGAAKTGSGKTFAFALPI 425
+ F LG+ +++ L G TPTPIQ+ I L+ G D +G A+TG+GKT AF +PI
Sbjct: 2 ESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPI 61
Query: 426 IQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
++ + E AL+L PT ELA Q+A++ + +L V V GG + +L +
Sbjct: 62 LETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRG 121
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
IVV PGR+ DHIS T L+ + Y+VLDEAD + + F +E I ++ ++++ L
Sbjct: 122 VQIVVGTPGRILDHISR-RTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRML 180
Query: 786 LFSAT--XHLMCVNRNY 830
LFSAT +M + +NY
Sbjct: 181 LFSATLPDSIMKLAKNY 197
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 128 bits (309), Expect = 2e-28
Identities = 73/164 (44%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAED--PYGIFALVLTPTHEL 491
PTPIQ LL+G D +G A+TGSGKTFAF +P I HL D GI LV++PT EL
Sbjct: 135 PTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTREL 194
Query: 492 AYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDTFS 671
A QI D +L + ++ C V GG + E+ ++L K+ +VVA PGRL D + +
Sbjct: 195 ASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQL-KKSQVVVATPGRLLDLLQE-GSVD 252
Query: 672 LKKIKYLVLDEADRLFSESFXXRLETIFSAL-PSKRQXLLFSAT 800
L ++ YLVLDEADR+ + F ++ I SKRQ L+F+AT
Sbjct: 253 LSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTAT 296
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 128 bits (308), Expect = 2e-28
Identities = 69/184 (37%), Positives = 106/184 (57%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F+ + + + L LG PT +Q I L D + ++TGSGKT +F +P+
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
+ + + ALVLTPT ELA Q+ + T +G+ +++ + G S + L+L ++
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKT 123
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
HIVV PGR+ DHI T SL+++KYLV+DEAD + + F ++E I LP+KR +L
Sbjct: 124 HIVVGTPGRVLDHIEK-GTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTML 182
Query: 789 FSAT 800
FSAT
Sbjct: 183 FSAT 186
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 128 bits (308), Expect = 2e-28
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Frame = +3
Query: 243 DGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALP 422
D +F L + +++ + G +TPTPIQ I +L G+D +G A+TG+GKT AFA+P
Sbjct: 80 DTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIP 139
Query: 423 IIQHL-----AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEES 587
++Q L E I +L++TPT ELA QI + F G+ L ++ GG +Q ++
Sbjct: 140 VLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQT 199
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L K I++A PGRL D + L+ I++ VLDEADR+ F + I + LP
Sbjct: 200 ASLQKGIDILIATPGRLLD-LMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELP 258
Query: 768 SKRQXLLFSAT 800
K+Q L FSAT
Sbjct: 259 KKKQSLFFSAT 269
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 128 bits (308), Expect = 2e-28
Identities = 74/185 (40%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA L + P + K ++ G +PTPIQ G I L G D +G A+TG+GKT +F LP+I
Sbjct: 13 FADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITM 72
Query: 435 LAEDPYGI---FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
LA +LVL PT ELA Q+A+ F I + +KL ++ GG E+ + K
Sbjct: 73 LARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKG 132
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
+++A PGRL DH L +K +V+DEADR+ F +E IF +P RQ L
Sbjct: 133 VDVLIATPGRLLDHFER-GKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFTRQTL 191
Query: 786 LFSAT 800
FSAT
Sbjct: 192 FFSAT 196
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 128 bits (308), Expect = 2e-28
Identities = 70/173 (40%), Positives = 101/173 (58%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
L+K + L +PT +Q+ I +L D I ++TGSGKT AFA+PI Q + D
Sbjct: 15 LLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQ 74
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLA 641
ALVL PT ELA Q+ + +G+ +L+V V G + + +L ++ H+VV PGR+
Sbjct: 75 ALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHVVVGTPGRII 134
Query: 642 DHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
DH+ TF +IKYLV+DEAD +F+ F ++ETI L KR +L SAT
Sbjct: 135 DHMEK-GTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLLSAT 186
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 128 bits (308), Expect = 2e-28
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
ND + F LG+ +I+ L + PTP+Q I L G D +A TGSGKT AF +
Sbjct: 13 NDVESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLI 72
Query: 420 PIIQHLAEDPYG---IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQI-EES 587
P ++ L A++L+PT ELA Q + + Q L ++TGGS + EE
Sbjct: 73 PTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALLLTGGSSNVKEEE 132
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
+L + P +V PGR+ DHI C+ F+L+ + LVLDE+DRL E F ++E + +LP
Sbjct: 133 ERLLEYPDFLVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLLQEGFYSQIEEVHKSLP 192
Query: 768 SKRQXLLFSAT 800
Q +L +AT
Sbjct: 193 ETTQSILVTAT 203
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 127 bits (307), Expect = 3e-28
Identities = 69/192 (35%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Frame = +3
Query: 234 TENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAF 413
T + + F + +++ L + PTPIQ+ I L G D +G+A TGSGKT AF
Sbjct: 785 TNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAF 844
Query: 414 ALPIIQHLAEDPYGI---FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEE 584
+PI++ L P + +L PT ELA Q + T L + C + GG E+
Sbjct: 845 VVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQ 904
Query: 585 SLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSAL 764
L KRP +++A PGR DH+ +F++ ++ LVLDEADR+ + F L I + +
Sbjct: 905 ENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTI 964
Query: 765 PSKRQXLLFSAT 800
P RQ +LFSAT
Sbjct: 965 PKSRQTMLFSAT 976
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 127 bits (306), Expect = 4e-28
Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F L + P +K L G PT IQ+ I LTG D +GAA+TGSGKT AF +PI++
Sbjct: 53 FDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILER 112
Query: 435 LAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
L + G+ ALV+TPT ELAYQI ++ +G+ + ++ GG D E ++
Sbjct: 113 LYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNRM-D 171
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
+ +IV+ PGR+ H+ F ++ LVLDEADR F + I + LP+KRQ
Sbjct: 172 QCNIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLDMGFEQTMNAIVANLPAKRQT 231
Query: 783 LLFSAT 800
LLFSAT
Sbjct: 232 LLFSAT 237
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 127 bits (306), Expect = 4e-28
Identities = 78/188 (41%), Positives = 104/188 (55%), Gaps = 6/188 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ P ++K L P PIQ+ I +L G D +G A+TGSGKT +F LPI+Q
Sbjct: 11 FATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQM 70
Query: 435 LAEDPYG----IFALVLTPTHELAYQIADQFTILGQ--PLKLRVCIVTGGSDQIEESLKL 596
L P G I ALVL PT ELA Q+ F P K++ V GG + ++L
Sbjct: 71 LQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQL 130
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
+ I++A PGRL D + + L ++ LVLDEAD++ + F + IF LP KR
Sbjct: 131 -QGVEILIATPGRLLDLVDSKAVY-LSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKR 188
Query: 777 QXLLFSAT 800
Q LLFSAT
Sbjct: 189 QNLLFSAT 196
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 127 bits (306), Expect = 4e-28
Identities = 75/192 (39%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
E KEF+ L + ++ L L T IQ+ I LL+G D + AAKTGSGKT AF
Sbjct: 23 EQPKKEFSTLPLHEKTLEVLKRLPFNTMYAIQEQAIPILLSGGDILAAAKTGSGKTLAFL 82
Query: 417 LPIIQHL----AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEE 584
+P I L A G L++ PT ELA QI D T+L + ++ GG ++ E
Sbjct: 83 IPAIDLLFRKNATKKDGTIVLIVAPTRELADQIFDVATLLLKDTEVSFGAAYGGKEKKNE 142
Query: 585 SLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSAL 764
+ L +++VA PGRL DHI +SL+ +K L++DEADR+ + + +L I +
Sbjct: 143 TTLLKSGINLLVATPGRLCDHILTTKDWSLENLKMLIIDEADRILEDGYKDQLHAIVEGI 202
Query: 765 PSKRQXLLFSAT 800
PS+RQ LFSAT
Sbjct: 203 PSERQTALFSAT 214
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 126 bits (305), Expect = 6e-28
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
+D FA LG+ +++ + LG PTPIQ I +L G D +G A+TG+GKT +F L
Sbjct: 288 SDRPRFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTL 347
Query: 420 PIIQHLAEDPYGI---FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
P++Q LA +L+L PT ELA Q+A+ F + G+ L+L ++ GG E+
Sbjct: 348 PMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRD 407
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
L + +++A PGRL D + G L + LV+DEADR+ F +E I + LP+
Sbjct: 408 VLNRGVDVLIATPGRLLD-LFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPA 466
Query: 771 KRQXLLFSAT 800
RQ L FSAT
Sbjct: 467 HRQTLFFSAT 476
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 126 bits (305), Expect = 6e-28
Identities = 72/184 (39%), Positives = 106/184 (57%), Gaps = 1/184 (0%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTG-DDCIGAAKTGSGKTFAFALPII 428
+F +G+ ++ + G PTPIQ+ I LL+G ++ IG A+TG+GKT AF +P+I
Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLI 62
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
+ L E + ALVLTPT ELA Q+ ++ L +L + V GG + L +R
Sbjct: 63 ERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRV 122
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+VV PGR+ DH++ T + KIKYLV+DEAD + F +E I S ++Q L+
Sbjct: 123 DLVVGTPGRIIDHLNR-GTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILM 181
Query: 789 FSAT 800
FSAT
Sbjct: 182 FSAT 185
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 126 bits (305), Expect = 6e-28
Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G+ L++ + G PTPIQ+ I +L D +G A+TGSGKT AF +P+I+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 435 LAEDP--YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL-AKR 605
L G A++++P+ ELA Q LG+ L+ ++ GG D +EE L A
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGG-DSLEEQFGLMAAN 206
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
P I++A PGR H+ + +L ++Y+V DEADRLF F +L I ALP RQ L
Sbjct: 207 PDIIIATPGRFL-HLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALPPSRQTL 265
Query: 786 LFSAT 800
LFSAT
Sbjct: 266 LFSAT 270
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 92.3 bits (219), Expect(2) = 7e-28
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Frame = +3
Query: 465 LVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLA 641
LVLTPT ELA Q+ + G+ L+ LR + GG ++ + LAK P I+VA PGRL
Sbjct: 141 LVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRLL 200
Query: 642 DHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
DH+ L ++K LVLDEADR+ F ++TI +A P+ RQ +LFSAT
Sbjct: 201 DHLER-GRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSAT 252
Score = 55.2 bits (127), Expect(2) = 7e-28
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
+D FA LG+ P ++ L G PTP+Q+ I + G D + ++ TGSGKT AF L
Sbjct: 40 SDEPTFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFML 99
Query: 420 PIIQHLAE 443
P I+ A+
Sbjct: 100 PAIERFAQ 107
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 126 bits (304), Expect = 7e-28
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G+ + K ++ G + PTPIQ+ I +L G D + A+TGSGKT AF +P+ +
Sbjct: 39 FQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIPMFER 98
Query: 435 L--AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L + G AL+L+PT ELA Q LG+ KL+ ++ GG ++ L + P
Sbjct: 99 LKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQFAALHENP 158
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
I++ PGRL H+ L+ ++Y+V DEADRLF F +L+ I P RQ LL
Sbjct: 159 DIIIGTPGRLM-HVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQEIIRRFPETRQTLL 217
Query: 789 FSAT 800
FSAT
Sbjct: 218 FSAT 221
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 126 bits (304), Expect = 7e-28
Identities = 74/185 (40%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F L ++ L+K + LG P+PIQ I RLL G D IG A+TG+GKT AF LP++
Sbjct: 5 ESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLL 64
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKR 605
Q + + ALVL PT ELA Q+A+ T L + L+ +R+ V GG ++ L +
Sbjct: 65 QRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRG 124
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
+VV PGR+ DHI+ T L ++ VLDEAD + F +E I S +P Q
Sbjct: 125 AQVVVGTPGRILDHINR-GTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSA 183
Query: 786 LFSAT 800
FSAT
Sbjct: 184 FFSAT 188
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 126 bits (304), Expect = 7e-28
Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F + + P ++K + P+ IQ + L+G D +G A+TGSGKT AF +P++
Sbjct: 118 ESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPML 177
Query: 429 QH-LAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESL 590
QH L + P G ALVL PT ELA QI + + L+ L+ CIV GG++ ++
Sbjct: 178 QHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRS 237
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
+L I VA PGR DH+ +T SL +I Y+VLDEADR+ F ++ I +LP
Sbjct: 238 ELRAGVEIAVATPGRFIDHLQQGNT-SLSRISYVVLDEADRMLDMGFEPQIREIMRSLPE 296
Query: 771 KRQXLLFSAT 800
K Q LLFSAT
Sbjct: 297 KHQTLLFSAT 306
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 126 bits (304), Expect = 7e-28
Identities = 76/200 (38%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K + G F +G+ ++K +L +G + PTPIQ+ I +L G D + AKTGSGKT
Sbjct: 31 KGKKKKGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTG 90
Query: 408 AFALPIIQHL--AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
F +P+ + L E G ALVLTPT ELA Q LG+ L+ +V GG
Sbjct: 91 CFLIPLFEKLKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSMDS 150
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
+ + P I+VA PGR H+ L ++Y V DEADRLF F +L
Sbjct: 151 QFAAIHTLPDIIVATPGRFL-HLCVEMDLKLSSVQYCVFDEADRLFEMGFGEQLTETLRR 209
Query: 762 LPSKRQXLLFSATXHLMCVN 821
LP RQ +LFSAT + V+
Sbjct: 210 LPEARQMVLFSATLPKLMVD 229
>UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp4 - Schizosaccharomyces pombe (Fission
yeast)
Length = 735
Score = 126 bits (304), Expect = 7e-28
Identities = 71/166 (42%), Positives = 98/166 (59%), Gaps = 4/166 (2%)
Frame = +3
Query: 315 TPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY----GIFALVLTPT 482
T T IQK CI L G D +GAAKTGSGKT AF +P+I++L + G+ ALV++PT
Sbjct: 61 TLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPT 120
Query: 483 HELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCD 662
ELA Q + +G+ ++ GG++ EE +L+ R +I+V PGRL HI
Sbjct: 121 RELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLS-RMNILVCTPGRLLQHIDQAV 179
Query: 663 TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
F ++ L+LDEADR+ F L+ I S+LP RQ +LFSAT
Sbjct: 180 NFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSAT 225
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 126 bits (304), Expect = 7e-28
Identities = 72/185 (38%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G+ P L++ + G PTPIQ+ I +L D +G A+TGSGKT AF +P+I+
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 435 LAEDP--YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKR 605
L G AL+++P+ ELA Q G+ L+ ++ GG D +E+ +
Sbjct: 152 LRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGG-DSLEDQFGFMTTN 210
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
P I++A PGR H+ + L IKY+V DEADRLF F +L I +LP RQ L
Sbjct: 211 PDIIIATPGRFL-HLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLTEILHSLPPSRQTL 269
Query: 786 LFSAT 800
LFSAT
Sbjct: 270 LFSAT 274
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 126 bits (303), Expect = 1e-27
Identities = 70/170 (41%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTG-DDCIGAAKTGSGKTFAFALPIIQ 431
F G+ ++ + +G TPTPIQ+ + LL G +D IG A TG+GKT AF +P+I+
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
++ ALVL+PT ELA Q+A+Q T+LG+ +RV + GG+ + + + H
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAH 165
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
IVVA PGRL D + L+ +K +VLDEAD + S F LETI SA
Sbjct: 166 IVVATPGRLVDFLEQ-KMIKLQSVKTVVLDEADEMLSMGFKEALETILSA 214
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 126 bits (303), Expect = 1e-27
Identities = 69/185 (37%), Positives = 108/185 (58%)
Frame = +3
Query: 246 GKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPI 425
G EF+ + + + L +G + TPIQ + L G D +G A+TG+GKT AFA+P+
Sbjct: 3 GLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPV 62
Query: 426 IQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
+++L + AL++ PT EL Q++++ +G+ +K++V V GG + +L +
Sbjct: 63 LENLEAERVPQ-ALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRG 121
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
H++VA PGRL DHI T L I +VLDEAD + + F +E I S +P +RQ +
Sbjct: 122 VHVIVATPGRLIDHIER-GTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTM 180
Query: 786 LFSAT 800
LFSAT
Sbjct: 181 LFSAT 185
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 126 bits (303), Expect = 1e-27
Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
+T G F G++ L+ + T G P+PIQ+ I LTG D + AK G+GKT +
Sbjct: 30 VTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTAS 89
Query: 411 FALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEES 587
F +P + + I AL+L PT ELA Q + LG + L+V I TGG+ ++
Sbjct: 90 FIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDI 149
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L+L + HI+V PGR+ D + SL K V+DEAD+L SE F +E + P
Sbjct: 150 LRLQQPVHILVGTPGRILD-LGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCP 208
Query: 768 SKRQXLLFSAT 800
+RQ +LFSAT
Sbjct: 209 QERQVMLFSAT 219
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 125 bits (302), Expect = 1e-27
Identities = 77/177 (43%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Frame = +3
Query: 288 KQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLA------EDP 449
K L G TPIQ I LL G D +G A+TG+GKT AFA+PI+Q LA +
Sbjct: 14 KALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGK 73
Query: 450 YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMP 629
I ALVL PT ELA QIA+ FT G L LR ++ GG Q ++ KL K I+VA P
Sbjct: 74 RQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATP 133
Query: 630 GRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
GRL D I+ L +++ VLDE D++ ++ I + LP +RQ +LFSAT
Sbjct: 134 GRLLDLINQ-GFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQNMLFSAT 189
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 125 bits (302), Expect = 1e-27
Identities = 75/176 (42%), Positives = 98/176 (55%), Gaps = 3/176 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAED--PYG 455
L+ LL G + PT IQ S LTG D IG A+TGSGKT AF LP I H+ +
Sbjct: 145 LMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGIAQTGSGKTLAFLLPAIVHILAQARSHD 204
Query: 456 IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGR 635
L+L PT EL QI DQF +L + GG D+ + +L K P I++A PGR
Sbjct: 205 PKCLILAPTRELTLQIYDQFQKFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGR 264
Query: 636 LADHI-SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L D + GC T LK++ +LVLDEADR+ F ++ I + +RQ +LFSAT
Sbjct: 265 LIDLLDQGCTT--LKQVSFLVLDEADRMLDMGFEPQIRKIVDQIRPQRQTMLFSAT 318
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 125 bits (301), Expect = 2e-27
Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F LG+ L++ + TPTPIQ I +L G D +G A+TG+GKT AF LPI+
Sbjct: 58 DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILH 117
Query: 432 HLAED-----PYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+A + P ALVL PT ELA QIAD G+ + V +V GG+ ++ ++
Sbjct: 118 RIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRM 177
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
++VA PGRL DH++ L ++ +VLDEAD++ F + I + LP +R
Sbjct: 178 ESGVDLLVATPGRLLDHVA-AGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQR 236
Query: 777 QXLLFSAT 800
Q ++FSAT
Sbjct: 237 QAVMFSAT 244
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 125 bits (301), Expect = 2e-27
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA L + P +++ + +G +PT IQ I L+ G D +G A+TG+GKT AFA+P++
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLAKRPH 611
+ ALVL PT ELA Q+A+ F G L +L V + GGS + L +
Sbjct: 75 IDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQ 134
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+VV PGR+ DH+ T L ++ +LVLDEAD + + F +E I S P +Q LF
Sbjct: 135 VVVGTPGRMIDHLERA-TLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
Query: 792 SAT 800
SAT
Sbjct: 194 SAT 196
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 124 bits (300), Expect = 2e-27
Identities = 72/187 (38%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ LG+ P ++K +L G TP+Q+ I L+G D + ++ TGSGKT AF LP IQ
Sbjct: 3 FSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQR 62
Query: 435 LAEDP----YGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLA 599
L +P G LVLTPT ELA Q+ G+ + + R + GG+ + +L+
Sbjct: 63 LLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRLS 122
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
+ +VVA PGRL DH+ +++ LVLDEADR+ F ++ I + P++RQ
Sbjct: 123 QPVDVVVATPGRLIDHLER-GKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPAERQ 181
Query: 780 XLLFSAT 800
LLFSAT
Sbjct: 182 TLLFSAT 188
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 124 bits (300), Expect = 2e-27
Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 10/192 (5%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ L++ + G PTP+Q+ I +L G D + AA+TG+GKT FALPI++
Sbjct: 3 FASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 435 L----------AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEE 584
L P LVLTPT ELA Q+ D F + + L + GG +
Sbjct: 63 LFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNPQ 122
Query: 585 SLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSAL 764
+AK ++VA PGRL D ++G + L +++ LVLDEADR+ F ++ + + L
Sbjct: 123 VQAMAKGVDVLVACPGRLLD-LAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARL 181
Query: 765 PSKRQXLLFSAT 800
P+KRQ LLFSAT
Sbjct: 182 PAKRQNLLFSAT 193
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 124 bits (300), Expect = 2e-27
Identities = 70/183 (38%), Positives = 101/183 (55%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+FA LG+ + L I PTP+Q I LL D + A+TG+GKT AF LPI++
Sbjct: 4 KFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILE 63
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
+ + I AL++TPT ELA QI + L + + + GG D ++ KL H
Sbjct: 64 RVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIH 123
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
I++ PGRL DH+ T +L K+ LVLDEAD++ F +E I + +P +RQ + F
Sbjct: 124 IIIGTPGRLLDHLRR-KTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFF 182
Query: 792 SAT 800
SAT
Sbjct: 183 SAT 185
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 124 bits (299), Expect = 3e-27
Identities = 72/184 (39%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ P +++ + ++G TPIQ+ I L+TG D G A+TG+GKT AF +P I+H
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLK-LAKRP 608
+ +L+L PT ELA Q+ + L + K LRV V GG + IE ++ L
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGG-ESIERQIRDLKAGA 121
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
HIVV PGR+ DH+ T + + ++LDEAD + + F +E I + LP +RQ +L
Sbjct: 122 HIVVGTPGRIIDHLDR-RTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVL 180
Query: 789 FSAT 800
FSAT
Sbjct: 181 FSAT 184
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 124 bits (299), Expect = 3e-27
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ L + L L PTPIQ I L G D + A+TG+GKT AF LP IQ
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 435 LAEDPY--GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L+ +P G+ AL+LTPT ELA QI + + + +R + GG ++ + +
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+IVVA PGRL D +S +L ++ L+LDE+DR+ F ++ I +A+P++RQ LL
Sbjct: 124 NIVVATPGRLYDFMSR-GLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLL 182
Query: 789 FSAT 800
FSAT
Sbjct: 183 FSAT 186
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 124 bits (299), Expect = 3e-27
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 6/188 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ L +L+LG ++PT IQ+ I +L+G D A TG+GKT A+ LP +Q
Sbjct: 4 FAELGLNKTLQANVLSLGYKSPTYIQEHSIGAVLSGTDTYAIAPTGTGKTAAYLLPTLQE 63
Query: 435 L------AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
L AE + AL L PT ELA Q+ + G+ L LR V GG + +
Sbjct: 64 LSRVDNSAEQVRPVRALFLVPTRELAVQVEESIAKYGKGLNLRTISVFGGVRIPSQVNRF 123
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
+ IVVA P RL D + FSL+++K+ V+DEADRL S L TI +A+P +
Sbjct: 124 KRGADIVVATPRRLVDLLK-VKAFSLEQVKHFVMDEADRLVSMGIVAELRTILAAMPQAK 182
Query: 777 QXLLFSAT 800
Q +LFSAT
Sbjct: 183 QQILFSAT 190
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA -
Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 124 bits (299), Expect = 3e-27
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 7/191 (3%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K +A GV ++ L LG PTPIQ I +++G D IG AKTGSGKT AF LP+
Sbjct: 510 KTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMF 569
Query: 429 QHLAEDPY-----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK 593
+H+ + P G A+++ PT EL QI + L LR V GG+ E+ +
Sbjct: 570 RHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAE 629
Query: 594 LAKRPHIVVAMPGRLADHISGCD--TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L + I+V PGR+ D ++ +L+++ Y+VLDEADR+F F ++ I +
Sbjct: 630 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVR 689
Query: 768 SKRQXLLFSAT 800
RQ ++FSAT
Sbjct: 690 PDRQTVMFSAT 700
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 124 bits (299), Expect = 3e-27
Identities = 74/193 (38%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K +N F +G+ LIK + G + PTPIQ+ I +L G D + AKTGSGKT
Sbjct: 32 KSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTA 91
Query: 408 AFALPIIQHL--AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
F +P+ + L E G AL+L+PT ELA Q LG+ ++L+ +V GG
Sbjct: 92 CFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDS 151
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
+ + P ++VA PGR H+ L I+Y+V DEADRLF F +L
Sbjct: 152 QFSAIHTCPDVIVATPGRFL-HLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHR 210
Query: 762 LPSKRQXLLFSAT 800
LPS RQ ++FSAT
Sbjct: 211 LPSSRQTVMFSAT 223
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 124 bits (299), Expect = 3e-27
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G+ P L + + + G PTPIQ+ I ++L G D + +KTGSGKT AF +P+I
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 435 LAEDP--YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L GI L+L PT ELA QIA L + ++ I+ GG + LA P
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNP 131
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
I++ PGR+ H+ D L +++ ++ DEAD LF +L+ I S LPS++Q L+
Sbjct: 132 DILICTPGRVLQHLLE-DRLKLSRVQMVIYDEADFLFEMGLADQLKQILSHLPSQKQSLM 190
Query: 789 FSAT 800
FSAT
Sbjct: 191 FSAT 194
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 124 bits (299), Expect = 3e-27
Identities = 78/193 (40%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Frame = +3
Query: 243 DGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALP 422
D +A + P ++ L G P PIQ I G D IG A TGSGKT AF +P
Sbjct: 120 DVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIP 179
Query: 423 IIQHLAE--DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
I++H D + ALV+ PT ELA+QI F ++ +RV +TGG ++ L
Sbjct: 180 ILEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLL 239
Query: 597 AKRPHIVVAMPGRLADHISGCD-TFSLKKIKYLVLDEADRLFSESFXXR----LETIFSA 761
K PH+VVA PGRL I+ + T + KKIK LVLDEADRL +S LE + +
Sbjct: 240 NKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNP 299
Query: 762 LPSKRQXLLFSAT 800
+ ++RQ +FSAT
Sbjct: 300 MHTQRQTFIFSAT 312
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 124 bits (298), Expect = 4e-27
Identities = 75/184 (40%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F G L+K L G P+PIQK L+ G D +G A+TG+GKT AFALP+++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFT--ILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L LVL PT ELA Q+AD F G P L+V V GG+D + L +
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHP-HLKVLAVYGGTDFRSQISTLRRGV 191
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+VV PGR+ DH+ T + LVLDEAD + F +E I LP +RQ +L
Sbjct: 192 DVVVGTPGRVMDHMRQ-GTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKERQVVL 250
Query: 789 FSAT 800
FSAT
Sbjct: 251 FSAT 254
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 124 bits (298), Expect = 4e-27
Identities = 74/186 (39%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ LG+ + K + G TP+PIQ I +LTG D + AA+TG+GKT F LP+++
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 435 LAEDPYG----IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
L++ I ALVLTPT ELA Q+++ G+ L LR +V GG + KL
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRH 122
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
++VA PGRL D + + +++ LVLDEADR+ F ++ I + LP+KRQ
Sbjct: 123 GVDVLVATPGRLLDLVQQ-NVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 783 LLFSAT 800
L+FSAT
Sbjct: 182 LMFSAT 187
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 124 bits (298), Expect = 4e-27
Identities = 70/186 (37%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ LG+ L+K + LG TPTPIQ I +L G + + AA+TG+GKT +F LP++
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 435 LAE----DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
A+ P + A++LTPT ELA Q+ + + L L + GG D + +L +
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
++VA PGRL D + ++ LVLDEADR+ F + +I LP +RQ
Sbjct: 123 GVDLLVATPGRLLDMYTQ-RAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQN 181
Query: 783 LLFSAT 800
LLFSAT
Sbjct: 182 LLFSAT 187
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 124 bits (298), Expect = 4e-27
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Frame = +3
Query: 264 LGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-A 440
+G+ + K + G PTPIQ+ I ++ G D + ++TGSGKT AF +P++Q L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 441 EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKRPHIV 617
D GI AL+++PT ELA Q LG+ LR + GG DQIEE + + P I+
Sbjct: 89 RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG-DQIEEQFSTIHENPDIL 147
Query: 618 VAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSA 797
+A PGRL I D L ++Y+V DEADRLF F +L +P RQ LLFSA
Sbjct: 148 LATPGRLLHVIVEMD-LRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSA 206
Query: 798 TXHLMCVN 821
T M V+
Sbjct: 207 TLPKMLVD 214
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 124 bits (298), Expect = 4e-27
Identities = 73/186 (39%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F LG+ ++ L ++G + PTPIQK I L G D +G A+TG+GKT AF +P+I
Sbjct: 2 QNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLI 61
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKR 605
+ + G+ +L+L PT ELA Q+A+Q + ++V V GG IE +K L K
Sbjct: 62 EKVV-GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGM-PIERQIKALKKG 119
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS-KRQX 782
P IVV PGR+ DH++ T I L+LDEAD + + F + I +P+ +RQ
Sbjct: 120 PQIVVGTPGRVIDHLNR-RTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQT 178
Query: 783 LLFSAT 800
+LFSAT
Sbjct: 179 MLFSAT 184
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 124 bits (298), Expect = 4e-27
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 7/173 (4%)
Frame = +3
Query: 303 LGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY-----GIFAL 467
LG P+PIQ I +L+G D IG AKTGSGKT ++ LP+++H+ + + G L
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGL 465
Query: 468 VLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADH 647
VL+PT ELA QI + + L+VC GGS+ + +L + +++VA PGRL D
Sbjct: 466 VLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDL 525
Query: 648 I--SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ +G +L++ ++VLDEADR+F F +++ IF+ + +Q +LFSAT
Sbjct: 526 LAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSAT 578
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 124 bits (298), Expect = 4e-27
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G+ + K ++ G + PTPIQ+ I +L G D + A+TGSGKT F LP+ +
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 435 LA--EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L G AL+L+PT ELA Q LG+ L+ ++ GG ++ L + P
Sbjct: 158 LKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENP 217
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
I++A PGRL H++ + L+ ++Y+V DEADRLF F +L+ I + LP Q +L
Sbjct: 218 DIIIATPGRLV-HVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVL 276
Query: 789 FSAT 800
FSAT
Sbjct: 277 FSAT 280
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 123 bits (297), Expect = 5e-27
Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Frame = +3
Query: 288 KQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIFAL 467
K L L TPIQ I ++ G D IG A+TG+GKTFAF +PII+ + +L
Sbjct: 16 KALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSL 75
Query: 468 VLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLAD 644
+L PT EL Q+ ++ +L ++R+ +V GG ++ L +PH+++A PGR D
Sbjct: 76 ILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPHLIIATPGRAID 135
Query: 645 HISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
H+ L +K L LDEAD + F LETI +P +RQ +LFSAT
Sbjct: 136 HLER-GKIDLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFSAT 186
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 123 bits (297), Expect = 5e-27
Identities = 78/192 (40%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTL----GIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALP 422
F+ LG P L+ L G R PT IQ I +L G D +G+A+TGSGKT AFALP
Sbjct: 3 FSSLGFSPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALP 62
Query: 423 IIQHLAEDPYG----IFALVLTPTHELAYQIADQFTILGQ--PLKLRVCIVTGGSDQIEE 584
++Q LA P G L+L PT ELA Q+ + + P +++V +V GG +
Sbjct: 63 MLQQLANAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQ 122
Query: 585 SLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSAL 764
+ L IVVA PGRL D + + + ++ LVLDEADRL F L I L
Sbjct: 123 MMNLRGGADIVVATPGRLLDLLEH-NALKISEVSTLVLDEADRLLDLGFGEELGRILELL 181
Query: 765 PSKRQXLLFSAT 800
P +RQ L FSAT
Sbjct: 182 PPRRQNLFFSAT 193
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 123 bits (297), Expect = 5e-27
Identities = 74/186 (39%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ LG+ + K + G TP+PIQ I +LTG D + AA+TG+GKT F LP+++
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 435 LAEDPYG----IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
L++ I ALVLTPT ELA Q+++ G+ L LR +V GG + KL
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRH 122
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
++VA PGRL D + +++ LVLDEADR+ F ++ I + LP+KRQ
Sbjct: 123 GVDVLVATPGRLLD-LEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQN 181
Query: 783 LLFSAT 800
L+FSAT
Sbjct: 182 LMFSAT 187
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 123 bits (296), Expect = 7e-27
Identities = 73/177 (41%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYG-- 455
L+K + ++ PTPIQ I L G D G A TG+GKT A+ LP ++ L P
Sbjct: 165 LLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGA 224
Query: 456 -IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSD-QIEESLKLAKRPHIVVAMP 629
LVL PT EL Q+ L Q + V + GG D +++ES+ L K P IV+A P
Sbjct: 225 VTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGLDVKVQESV-LRKNPDIVIATP 283
Query: 630 GRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
GRL DH++ TFSL I+ L+LDEADR+ E F +++ I RQ +LFSAT
Sbjct: 284 GRLIDHLANTPTFSLDTIEVLILDEADRMLDEYFAEQMKHIVRQCARTRQTILFSAT 340
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 123 bits (296), Expect = 7e-27
Identities = 71/186 (38%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF+ LG+ P ++ + G T TPIQ I L G D +G A+TG+GKT AF LP+I
Sbjct: 3 EFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLID 62
Query: 432 HLAEDPYGI---FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
L ALV+ PT ELA Q+A F + KL ++ GG ++ KL +
Sbjct: 63 KLMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDR 122
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
+++A PGRL DH + +++LV+DEADR+ F +E IF P K+Q
Sbjct: 123 GVDVLIATPGRLLDHFER-GKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQT 181
Query: 783 LLFSAT 800
L FSAT
Sbjct: 182 LFFSAT 187
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 123 bits (296), Expect = 7e-27
Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ P +++ + +G TP+PIQ I LL G+ +G A+TG+GKT AFALP++
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSR 85
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRPH 611
+ + LVL PT ELA Q+A+ FT + V + GG D + L +
Sbjct: 86 IDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGAQ 145
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
++V PGR+ DH+ T L +K LVLDEAD + F +E I + P Q LF
Sbjct: 146 VIVGTPGRMLDHLRK-GTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALF 204
Query: 792 SAT 800
SAT
Sbjct: 205 SAT 207
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 122 bits (295), Expect = 9e-27
Identities = 71/182 (39%), Positives = 98/182 (53%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F + +K ++K L +G PT IQ+ + G D IG A+TG+GKT AFA+PI+ +
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L I LV+ PT ELA QI DQ ILG+ ++ ++ GG ++ L +I
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
VVA PGRL D ++ + L IK LDEAD L F + I + LP KRQ F+
Sbjct: 123 VVATPGRLEDLLAQ-NKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFT 181
Query: 795 AT 800
AT
Sbjct: 182 AT 183
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 122 bits (295), Expect = 9e-27
Identities = 66/182 (36%), Positives = 102/182 (56%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA L + +++ L G T IQ+ I LL G D +G + TGSGKT AF +PII+H
Sbjct: 57 FASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEH 116
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
++P AL++TPT ELA QI +F L + ++L GG++ + L+++ H+
Sbjct: 117 ALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLHV 176
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
+V PGRL D ++ L ++K LVLDE DR+ F ++ + + + Q +LFS
Sbjct: 177 IVGTPGRLLD-LTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQREQTMLFS 235
Query: 795 AT 800
AT
Sbjct: 236 AT 237
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 122 bits (295), Expect = 9e-27
Identities = 69/177 (38%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
Frame = +3
Query: 285 IKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY---- 452
IK L+ PTP+Q L+G D +G +KTGSGKT +F LP I+H+ P
Sbjct: 151 IKNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILAQPRQSYY 210
Query: 453 -GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMP 629
G LV+ PT ELA QI + + + + + + GG+ + + L+L++RP IVV P
Sbjct: 211 PGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTP 270
Query: 630 GRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
GR+ D + D SLK I +LV+DEADRL F +++ IF+++ RQ L +SAT
Sbjct: 271 GRIIDFMESGD-LSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVLYWSAT 326
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 122 bits (294), Expect = 1e-26
Identities = 70/184 (38%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F+ L + ++ L +G +PTPIQ I LL G D +G A+TG+GKT AF+LP++
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRP 608
L Y A+V+ PT ELA Q+A + LGQ +K L+V + GG+ +++ L
Sbjct: 87 KLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGA 146
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
HIVV PGR+ D I+ D L + +LDEAD + F + I P Q +L
Sbjct: 147 HIVVGTPGRVKDLITR-DRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVL 205
Query: 789 FSAT 800
FSAT
Sbjct: 206 FSAT 209
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 122 bits (294), Expect = 1e-26
Identities = 77/190 (40%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ L +L L PTPIQ I +L+G D + A TGSGKT AFA+P++Q
Sbjct: 11 FAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQR 70
Query: 435 L-----AEDPYG-IFALVLTPTHELAYQIADQFTILGQPL--KLRVCIVTGGSDQIEESL 590
L AE G + LVL PT ELA Q+AD F +L++ GG +
Sbjct: 71 LFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQ 130
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
L ++VA PGRL D ++ + L ++ LVLDEADR+ S F L + ALP+
Sbjct: 131 SLRAGADVLVATPGRLLDLLAS-NALKLNRVLALVLDEADRMLSLGFTDELNQVLEALPA 189
Query: 771 KRQXLLFSAT 800
K+Q LL+SAT
Sbjct: 190 KKQTLLYSAT 199
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 122 bits (294), Expect = 1e-26
Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Frame = +3
Query: 303 LGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-----AEDPYGIFAL 467
LG PTPIQ + +++G D IG AKTGSGKT AF LP+ +H+ E G +
Sbjct: 494 LGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGI 553
Query: 468 VLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADH 647
++TPT ELA QI + + L LR V GG+ E+ ++ K IVVA PGRL D
Sbjct: 554 IMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDL 613
Query: 648 ISGCD--TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
++ +L ++ YLVLDEADR+F F ++ I + + RQ +LFSAT
Sbjct: 614 LTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSAT 666
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 122 bits (294), Expect = 1e-26
Identities = 71/191 (37%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+++A G+ + + LG PTPIQ + L++G D IG AKTGSGKT AF LP+
Sbjct: 597 QKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMF 656
Query: 429 QHLAEDP-----YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK 593
+H+ + P G L++TPT ELA QI + + LR GG+ E+ +
Sbjct: 657 RHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAE 716
Query: 594 LAKRPHIVVAMPGRLADHISGCD--TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L + I+V PGR+ D ++ +LK++ Y+VLDEADR+F F ++ IF+ +
Sbjct: 717 LKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMR 776
Query: 768 SKRQXLLFSAT 800
RQ +LFSAT
Sbjct: 777 PDRQTILFSAT 787
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 122 bits (294), Expect = 1e-26
Identities = 76/190 (40%), Positives = 101/190 (53%), Gaps = 5/190 (2%)
Frame = +3
Query: 246 GKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPI 425
G FA G L+ Q+ PTPIQ + L+G D IG AKTGSGKT AF P+
Sbjct: 252 GSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPM 311
Query: 426 IQHL-----AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
+ H+ E G A+++ PT EL QI + G+ LR V GG E++
Sbjct: 312 LIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAK 371
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
L + IVV PGRL DH+ T +L+++ YLV DEADR+F F ++ +I S +
Sbjct: 372 ALQEGAEIVVCTPGRLIDHVKKKAT-NLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430
Query: 771 KRQXLLFSAT 800
RQ LLFSAT
Sbjct: 431 DRQTLLFSAT 440
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 122 bits (293), Expect = 2e-26
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Frame = +3
Query: 225 VKMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKT 404
+K T +F+ L + + +L +G +PIQ I +L G D IG A+TG+GKT
Sbjct: 1 MKGTSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKT 60
Query: 405 FAFALPIIQHLAEDPYGIFALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIE 581
AFA+P I+ L + + AL+L PT EL Q+++QF ++ V + GG +IE
Sbjct: 61 AAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGG-QEIE 119
Query: 582 ESLK-LAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFS 758
L+ L K P IV+A PGR+ DH+ + L +IK +VLDEAD + F +E I
Sbjct: 120 RQLRALRKNPQIVIATPGRMMDHMRR-GSIHLDEIKIVVLDEADEMLDMGFREDMEFILK 178
Query: 759 ALPSKRQXLLFSAT 800
P+ RQ ++FSAT
Sbjct: 179 DTPADRQTIMFSAT 192
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 122 bits (293), Expect = 2e-26
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
EF + +I ++ G + PTPIQK CI L+ G+D +G A+TG+GKT AF+LPII
Sbjct: 3 EFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIIN 62
Query: 432 HLAEDPYGIFA-----LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+ I A L+LTPT ELA QI L L+ +V GG + + +
Sbjct: 63 KFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSI 122
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
I+VA PGRL D I D + K ++ VLDEAD + F +++I S LP R
Sbjct: 123 ELGLDILVATPGRLLDLIETGD-INFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSR 181
Query: 777 QXLLFSAT 800
Q LLFSAT
Sbjct: 182 QTLLFSAT 189
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 122 bits (293), Expect = 2e-26
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F L + P L + + +G T IQ+ I L D IG + TG+GKT AF +PI+Q+
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKRPH 611
L A++L PTHELA QI +Q L+ + ++ GGS I+ + ++ +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGS-HIQRQIYALRKSN 121
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
I+V PGR+ADHI+ T L KIK +VLDEAD + F L+ +F P+K Q LLF
Sbjct: 122 IIVGTPGRIADHINR-KTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLF 180
Query: 792 SAT 800
SAT
Sbjct: 181 SAT 183
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 122 bits (293), Expect = 2e-26
Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 8/190 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA + P + K + G PTPIQ I ++TG D +GAA+TG+GKT F+LPI+
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 435 L--------AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
L + + + AL+LTPT ELA Q+A + LR +V GG D +
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQ 141
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
L + +V+A PGRL DH+ + +L +++ LVLDEADR+ F L+ I + LP
Sbjct: 142 TLRRGVELVIATPGRLLDHVQQ-KSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPK 200
Query: 771 KRQXLLFSAT 800
RQ LLFSAT
Sbjct: 201 TRQNLLFSAT 210
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 122 bits (293), Expect = 2e-26
Identities = 73/187 (39%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA G ++ + L PT IQ + L+G D IG AKTGSGKT AF P + H
Sbjct: 108 FAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVH 167
Query: 435 LAEDPY-----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
+ + P G L+ PT EL QI + G+ + V V GG ++ E+S L
Sbjct: 168 IMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQ 227
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
+ IVVA PGRL DH+ T +L ++ YLV DEADR+F F ++ +I + + RQ
Sbjct: 228 EGAEIVVATPGRLIDHVKAKAT-NLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQ 286
Query: 780 XLLFSAT 800
LLFSAT
Sbjct: 287 TLLFSAT 293
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 122 bits (293), Expect = 2e-26
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 7/185 (3%)
Frame = +3
Query: 267 GVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAED 446
G+ ++ + L P PIQ + +++G DCIG AKTGSGKT F LP+++H+ +
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594
Query: 447 P-----YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
P G LV+ PT EL QI +PL +R V GGS ++ +L +
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654
Query: 612 IVVAMPGRLADHI--SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
IVV PGR+ D + S +L+++ +LV+DEADR+F F ++ I + +RQ +
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 714
Query: 786 LFSAT 800
LFSAT
Sbjct: 715 LFSAT 719
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 121 bits (292), Expect = 2e-26
Identities = 63/183 (34%), Positives = 104/183 (56%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F L + + K ++ +G P+PIQ I +L G D IG A+TG+GKT AF +P+++
Sbjct: 7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVE 66
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
++ + + AL+LTPT ELA Q++ + L + K+R + GG + + L +
Sbjct: 67 KVSTGRH-VQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQ 125
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+V+ PGR+ DH+ T L + ++LDEAD + F +E+I + ++RQ LLF
Sbjct: 126 VVIGTPGRIIDHLRR-KTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQTLLF 184
Query: 792 SAT 800
SAT
Sbjct: 185 SAT 187
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 121 bits (292), Expect = 2e-26
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ L++ + LG PTP+Q I +L D I A+TG+GKT +F LP+I
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMIDI 62
Query: 435 LAEDPYGI---FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
LA +L+L PT ELA Q+A+ F G+ KL + ++ GG E+ L K
Sbjct: 63 LAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKG 122
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
+++A PGRL D + L + LV+DEADR+ F +ETI + LP+ RQ L
Sbjct: 123 VDVLIATPGRLLD-LFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTL 181
Query: 786 LFSAT 800
LFSAT
Sbjct: 182 LFSAT 186
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 121 bits (292), Expect = 2e-26
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 3/193 (1%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
M K+F+ LG+ ++ ++ LG PTPIQ+ I +L+G D +G A+TG+GKT A
Sbjct: 1 MNSETKKDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAA 60
Query: 411 FALPIIQH--LAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIE 581
FALP+I + LA LVL PT ELA Q+A+QF + + L V + GG +
Sbjct: 61 FALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGS 120
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
+ L + +VV GR+ DHI T L ++ LVLDEAD + F ++ + S
Sbjct: 121 QIRALKQGVKVVVGTTGRVMDHIEK-GTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSH 179
Query: 762 LPSKRQXLLFSAT 800
+ + Q LLFSAT
Sbjct: 180 VSDECQRLLFSAT 192
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 121 bits (292), Expect = 2e-26
Identities = 72/187 (38%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F L + + + + +G T IQ CI +LL D + AKTGSGKT AF +P+++
Sbjct: 51 KFEDLPISEPVKRAIKDMGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPVVE 110
Query: 432 ---HLAEDPY-GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
L P G A++++PT EL+ Q T L Q LR+ ++ GGS++ E+ L
Sbjct: 111 LMLSLGLQPRNGTGAIIISPTRELSLQTYGVLTELIQFTNLRIGLIMGGSNRQTEAQNLE 170
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
K I+VA PGRL DH++ F +K LV+DEADRL F + I LP+ RQ
Sbjct: 171 KGVTILVATPGRLLDHLTNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVRQ 230
Query: 780 XLLFSAT 800
+LFSAT
Sbjct: 231 TMLFSAT 237
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 121 bits (292), Expect = 2e-26
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F L + P + K + +G +PIQ I ++L D G A+TG+GKT AF +P+++
Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLE 64
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLAKRP 608
++ + + A++L PT ELA Q+A++ L L K+ V V GG + L K
Sbjct: 65 NIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGV 124
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
I++ PGR+ DHI T SL IK ++LDEAD + F +E I +P +RQ LL
Sbjct: 125 QIIIGTPGRVMDHIDR-GTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLL 183
Query: 789 FSAT 800
FSAT
Sbjct: 184 FSAT 187
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 121 bits (292), Expect = 2e-26
Identities = 73/189 (38%), Positives = 99/189 (52%), Gaps = 7/189 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F + + L++ L +L PTPIQ I L G D +G+A TGSGKT AF +PI++
Sbjct: 224 FTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILER 283
Query: 435 LAEDPYG-----IFALVLTPTHELAYQIADQFTILGQP--LKLRVCIVTGGSDQIEESLK 593
L G LVL PT ELA Q L + L +R ++ GG ++
Sbjct: 284 LCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQAHT 343
Query: 594 LAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSK 773
L P I++A PGRL DH++ +F+L + LV+DEADR+ F LE I A P
Sbjct: 344 LRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPRS 403
Query: 774 RQXLLFSAT 800
RQ +LFSAT
Sbjct: 404 RQTMLFSAT 412
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 121 bits (291), Expect = 3e-26
Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Frame = +3
Query: 315 TPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE-----DPYGIFALVLTP 479
TPTPIQ I LTG D +G A+TG+GKT +FALPI+ L E P LVL+P
Sbjct: 38 TPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSP 97
Query: 480 THELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGC 659
T EL+ QI D F G+ ++L + GG + L + ++VA PGRL D +
Sbjct: 98 TRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQS- 156
Query: 660 DTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ L +++LVLDEADR+ F + I + LP KRQ L FSAT
Sbjct: 157 NGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSAT 203
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 121 bits (291), Expect = 3e-26
Identities = 77/185 (41%), Positives = 101/185 (54%), Gaps = 8/185 (4%)
Frame = +3
Query: 270 VKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-AED 446
+ P L +L GI +PIQ + L G D IG A+TG+GKT AFALPIIQ+L A D
Sbjct: 7 IAPELAARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPD 66
Query: 447 PYGI-------FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
G A+V+ PT ELA Q+A++F+ G +L V GG+ + L +
Sbjct: 67 GRGSRERGRLPRAIVIAPTRELAKQVAEEFSKSGP--QLSTVTVYGGAAYGPQENALRRG 124
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
+VV PGRL DH+ L I+Y VLDEAD + S F +ETI P+ RQ +
Sbjct: 125 VDVVVGTPGRLIDHLER-GNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTM 183
Query: 786 LFSAT 800
LFSAT
Sbjct: 184 LFSAT 188
>UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Moritella sp. PE36|Rep: ATP-dependent RNA
helicase, DEAD box family - Moritella sp. PE36
Length = 460
Score = 121 bits (291), Expect = 3e-26
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F G+ P LI + LG T +Q+ I +L G D + ++TGSGKT A+ LPI+Q
Sbjct: 3 FQDFGIDPRLISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPILQR 62
Query: 435 LAE----DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
+ + + + A++L PT ELA Q+ LG L ++ ++ G + L K
Sbjct: 63 MLKQRRFEHRAVRAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEKLLRK 122
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS-KRQ 779
P +++A PGRL DHI + SL+ +++LVLDEADR+ F + I ++ P+ KRQ
Sbjct: 123 NPEVLIATPGRLLDHIRE-KSISLEHLEFLVLDEADRMLDMGFRDDVSAISNSAPNVKRQ 181
Query: 780 XLLFSAT 800
+LFSAT
Sbjct: 182 TMLFSAT 188
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 121 bits (291), Expect = 3e-26
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
N +F LG+K ++ + T G + PTPIQ + +L G D + AKTG+GKT AFA+
Sbjct: 2 NKNVQFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAI 61
Query: 420 PIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKL 596
P +QHL + L+LTP EL QI+ +F LG+ L+ RV VTGG ++ K
Sbjct: 62 PALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGG-KLSGVKKS 120
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
++ A PGRL D I + I LV+DEADRLF F + +I LP
Sbjct: 121 LHGAQVISATPGRLID-IKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSV 179
Query: 777 QXLLFSAT 800
Q +L SAT
Sbjct: 180 QTVLCSAT 187
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 121 bits (291), Expect = 3e-26
Identities = 68/192 (35%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K + +F LG+ ++ L ++G TP+PIQ+ CI+ LL D IG A+TG+GKT
Sbjct: 5 KSDQKSPSKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTA 64
Query: 408 AFALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEE 584
AF LP++ + + L+L PT ELA Q+++ + +K V + GG +
Sbjct: 65 AFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQ 124
Query: 585 SLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSAL 764
L + H +V PGR+ DHI T L +K VLDEAD + F ++ I +
Sbjct: 125 LRPLKRGVHAIVGTPGRVMDHIEK-KTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRI 183
Query: 765 PSKRQXLLFSAT 800
P +RQ LFSAT
Sbjct: 184 PEQRQIALFSAT 195
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 121 bits (291), Expect = 3e-26
Identities = 76/190 (40%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ LG+ L+ L G PTPIQ I + L G D + AA+TG+GKT AF LP ++
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 90
Query: 435 L------AEDP--YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
L + P + + LVLTPT ELA QI + L LR ++ GG + +++
Sbjct: 91 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 150
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
L IVVA GRL DH+ SL K++ +VLDEADR+ F + I LP
Sbjct: 151 DLRAGCEIVVATVGRLLDHVKQ-KNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPK 209
Query: 771 KRQXLLFSAT 800
+RQ LLFSAT
Sbjct: 210 QRQTLLFSAT 219
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 121 bits (291), Expect = 3e-26
Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ G+ ++K L P PIQ CI L+ G D IG A+TGSGKT AF LP I+H
Sbjct: 370 FSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIRH 429
Query: 435 LAEDPY-----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
+ P G+ LV+ PT EL QI+++ + + + L+ + GG+ E+ L
Sbjct: 430 ALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNALK 489
Query: 600 KRPHIVVAMPGRLAD--HISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSK 773
+ IV+ PGRL D +S +L+++ +LVLDEADR+F F ++ I +
Sbjct: 490 RGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGNIRPD 549
Query: 774 RQXLLFSATXHLMCVN 821
RQ LFSAT +M N
Sbjct: 550 RQTALFSATFPIMIEN 565
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 121 bits (291), Expect = 3e-26
Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Frame = +3
Query: 279 WLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY-- 452
+++ ++ P+PIQ +L+G D IG A+TGSGKT +F LP I H+ P
Sbjct: 111 YIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVHINAQPTVK 170
Query: 453 ---GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVA 623
G LVL PT ELA QI + G+ KL+ + GG+D+ + L + +V+A
Sbjct: 171 KGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIA 230
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGRL D + +T +L+++ YLVLDEADR+ F ++ I + RQ L+FSAT
Sbjct: 231 TPGRLIDFLES-ETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSAT 288
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 120 bits (290), Expect = 4e-26
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
LI L T+ I PT IQK I + G D + +++TGSGKT A+ LP+I ++
Sbjct: 14 LIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFIKNK--TT 71
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLA 641
AL+L PT ELA QI + K+ ++ GG ++ ++L K P +++ PGR+
Sbjct: 72 ALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVIIGTPGRII 131
Query: 642 DHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT--XHLMC 815
DH++ + + +I VLDE DR+ +LE I LP KRQ L+FSAT H++
Sbjct: 132 DHLNR-GSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSATMPKHIIA 190
Query: 816 VNRNY 830
V++ Y
Sbjct: 191 VSQKY 195
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 120 bits (290), Expect = 4e-26
Identities = 72/182 (39%), Positives = 100/182 (54%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ L + LI L + PT IQ I LL G D + A TGSGKT A+ LP+++
Sbjct: 3 FSTLSLSSELI-HALPKDFKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEK 61
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L +P AL+L P ELA Q+++ +GQ L L + GG D+ ++ LA PHI
Sbjct: 62 LGVNPEQK-ALILVPIRELATQVSEAINQVGQALGLNAVCLCGGVDKEQQLQALATNPHI 120
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
+VA GRL D + + L I YLVLDEADRL + F ++ I + ++RQ +FS
Sbjct: 121 LVATTGRLVDLAN--NGLDLSNIHYLVLDEADRLLNMGFWPDVQNIAGQISNQRQTAMFS 178
Query: 795 AT 800
AT
Sbjct: 179 AT 180
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 120 bits (290), Expect = 4e-26
Identities = 71/183 (38%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ L + P L+K L LG PTPIQ I ++G D + +A TGSGKT AF LPI+
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 435 LAEDPYGIF-ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
L + P G ALV+TPT ELA QI + L + V GG + +
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+++ PGRL DH L +++LVLDEADR+ F + I +P++RQ L F
Sbjct: 123 VLIGTPGRLLDHFR-APYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFF 181
Query: 792 SAT 800
SAT
Sbjct: 182 SAT 184
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 120 bits (290), Expect = 4e-26
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
N+ +A LG+ ++K + G TP+Q G I + D I A TG+GKTFAF +
Sbjct: 9 NEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGI 68
Query: 420 PIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKL 596
P+++H+ + + ALVL PT ELA QI D+ L + + +R + GG+ ++ L
Sbjct: 69 PMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTL 128
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
K P IVVA PGRL DH+ T L K++ +VLDEADR+ F + I + S++
Sbjct: 129 KKHPQIVVATPGRLMDHMKR-RTVKLDKVETVVLDEADRMLDMGFIHDVTRILDQIKSRK 187
Query: 777 QXLLFSAT 800
LFSAT
Sbjct: 188 NLGLFSAT 195
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 120 bits (290), Expect = 4e-26
Identities = 74/191 (38%), Positives = 100/191 (52%), Gaps = 2/191 (1%)
Frame = +3
Query: 234 TENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAF 413
++ G F ++ L+ +L G PTPIQ+ I +L G+D + A+TGSGKT AF
Sbjct: 17 SKKKGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAF 76
Query: 414 ALPIIQHLAEDP--YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEES 587
+P++ L GI LVL+PT EL+ QI L + L LR + GG ++
Sbjct: 77 LIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQF 136
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
LA P +VVA PGRL HI + L ++ LVLDEADRLF ++ I LP
Sbjct: 137 ELLASNPDVVVATPGRLL-HIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLP 195
Query: 768 SKRQXLLFSAT 800
Q LFSAT
Sbjct: 196 ESCQRALFSAT 206
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 120 bits (290), Expect = 4e-26
Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 2/193 (1%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K + G F + + + K + T G PTPIQ+ I +L G D + ++TGSGKT
Sbjct: 292 KSKKKKGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTA 351
Query: 408 AFALPIIQHLAEDP--YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
AF +P+I L G AL++ PT ELA QIA + L ++ GG
Sbjct: 352 AFIIPLINKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEG 411
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
+ LA P I++A PGRL+ I D SL K+++L+ DE D LF F +++TI
Sbjct: 412 QFESLASNPDIIIATPGRLSQLIDETD-LSLNKVEFLIFDECDYLFEMGFADQMKTILKK 470
Query: 762 LPSKRQXLLFSAT 800
+ +RQ L+FSAT
Sbjct: 471 VSQQRQTLMFSAT 483
>UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1;
Toxoplasma gondii|Rep: Dead-box helicase, putative -
Toxoplasma gondii
Length = 822
Score = 120 bits (290), Expect = 4e-26
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVK-PWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
F LG+ P + + LG PTPIQ+ I LL G DCI ++TGSGKT F LP++
Sbjct: 26 FETLGLSTPTSLAAIKGLGFSQPTPIQRRAIPLLLKGKDCILMSRTGSGKTACFLLPLLD 85
Query: 432 HLAE--DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
L E G+ A+++ PT EL QI + L LRVC + GG + ++ L L++
Sbjct: 86 LLGEHSSVVGVRAVLIAPTRELVAQIHRVCSKLLHSSSLRVCCLLGGENYSKQFLALSRN 145
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
P +++ GR + I SL ++LVLDEADR+F + +L +F+ALP+ +Q +
Sbjct: 146 PDVLLTTVGRGSQLIHD-KVLSLSAARFLVLDEADRIFELGWKEQLSMLFAALPASKQVV 204
Query: 786 LFSAT 800
L SAT
Sbjct: 205 LVSAT 209
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 120 bits (290), Expect = 4e-26
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGD-DCIGAAKTGSGKTFAFALPIIQ 431
F L + ++ + G PT IQ I L + + + A+TGSGKT +FA+P+I+
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
L + GI A++LTPT ELA Q+AD+ L L++ + GG I +K K +
Sbjct: 68 -LVNENNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGK-AIYPQIKALKNAN 125
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
IVV PGR+ DHI+ T +LK +KY +LDEAD + + F +E I +A ++ LLF
Sbjct: 126 IVVGTPGRILDHINR-GTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLF 184
Query: 792 SAT 800
SAT
Sbjct: 185 SAT 187
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 120 bits (290), Expect = 4e-26
Identities = 64/173 (36%), Positives = 100/173 (57%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
+++ L LG PT +Q+ I L D + ++TGSGKT +F +P+ + D
Sbjct: 13 ILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQ 72
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLA 641
AL+LTPT ELA Q+ + T +G+ +++ V G S ++ +L ++ HIVV PGR+
Sbjct: 73 ALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVL 132
Query: 642 DHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
DHI T L ++ YLV+DEAD + + F ++E I LP++R +LFSAT
Sbjct: 133 DHIEK-GTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSAT 184
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 120 bits (289), Expect = 5e-26
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
L K L G + PTPIQ+ I L G D +G A TG+GKT AFA+PI++ L + +
Sbjct: 11 LQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVK 70
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA--KRPHIVVAMPGR 635
ALVLTPT ELA Q+ +Q +L + +L + GG+ ++++L + K I++ PGR
Sbjct: 71 ALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGT-SVKQNLDILQNKNVDILIGTPGR 129
Query: 636 LADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ D I +L K++YLVLDE D++ F +E I S LP +R +FSAT
Sbjct: 130 IKDLIDR-KALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMFSAT 183
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 120 bits (289), Expect = 5e-26
Identities = 70/182 (38%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL--AEDPYG 455
++K +L G + PTPIQ+ I L G D + A+TGSGKT F +P+ + L + G
Sbjct: 47 ILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVG 106
Query: 456 IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGR 635
AL+L+PT ELA Q LG+ L+ I+ GG + + + P I++A PGR
Sbjct: 107 ARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNPDILIATPGR 166
Query: 636 LADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSATXHLMC 815
HI L I+Y+V DEADRLF F ++ I + LP RQ LLFSAT +
Sbjct: 167 FL-HICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLLFSATLPKLL 225
Query: 816 VN 821
V+
Sbjct: 226 VD 227
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 120 bits (289), Expect = 5e-26
Identities = 70/182 (38%), Positives = 95/182 (52%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ LG+ L + +G PTPIQ + +L G D G+A+TG+GKT AFALPI+
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L + LVL PT ELA Q+ + F + L +V GG ++ L + +
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDV 254
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
V A PGRL DHI T +L ++ LVLDE DR+ F ++ I P RQ L FS
Sbjct: 255 VAATPGRLLDHIEQ-GTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFFS 313
Query: 795 AT 800
AT
Sbjct: 314 AT 315
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 120 bits (289), Expect = 5e-26
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGD-DCIGAAKTGSGKTFAFALPII 428
+F LG++PW+ + L G + P+PIQ+ I LL+ D D IG A+TG+GKT AF LPI+
Sbjct: 3 KFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIV 62
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
Q + AL+L PT ELA Q+ ++ + + + GG+ +++ L K
Sbjct: 63 QKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGV 122
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+VVA PGR I L ++YLVLDEAD + + F +E + A P R L+
Sbjct: 123 DLVVATPGRCIHFIED-GKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLM 181
Query: 789 FSAT 800
FSAT
Sbjct: 182 FSAT 185
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 120 bits (289), Expect = 5e-26
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Frame = +3
Query: 303 LGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP-----YGIFAL 467
L +P+ IQ I +++G D IG AKTGSGKT +F LP+++H+ + P G L
Sbjct: 335 LNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGL 394
Query: 468 VLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADH 647
++TPT ELA QI + + L + C GGS + +L K I+V PGR+ D
Sbjct: 395 IMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIIDL 454
Query: 648 ISGCD--TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
++ +L+++ YLVLDEADR+F F ++ +F+ + RQ +LFSAT
Sbjct: 455 LAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSAT 507
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 120 bits (289), Expect = 5e-26
Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
++F L + +K + +G T T +Q I LL G D +GAAKTGSGKT AF +P I
Sbjct: 42 EKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 101
Query: 429 QHLAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+ L + G +V+TPT ELA QI L + IV GG+++ +E+ KL
Sbjct: 102 ELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL 161
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSK- 773
K ++++A PGRL DH+ F K +K L++DEADR+ F + I LP++
Sbjct: 162 MKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNED 221
Query: 774 RQXLLFSAT 800
RQ +LFSAT
Sbjct: 222 RQSMLFSAT 230
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 120 bits (288), Expect = 6e-26
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ ++K + G P+ IQ I +L G D + AA+TG+GKT F LP+++
Sbjct: 7 FNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLEI 66
Query: 435 LAEDPYG----IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK 602
L++ + ALVLTPT ELA Q+A+ GQ L L+ +V GG + + L +
Sbjct: 67 LSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRR 126
Query: 603 RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
I++A PGR+ D + K++ LVLDEADR+ F ++ I + LP KRQ
Sbjct: 127 GADILIATPGRMMD-LYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQN 185
Query: 783 LLFSAT 800
LLFSAT
Sbjct: 186 LLFSAT 191
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 120 bits (288), Expect = 6e-26
Identities = 74/191 (38%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
M+E FA L + L++ L LG +P+PIQ I LL D +G A+TG+GKT +
Sbjct: 1 MSEPSFPLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTAS 60
Query: 411 FALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEES 587
FALPI+ + ALVL PT ELA Q+A+ F + V + GG +
Sbjct: 61 FALPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQL 120
Query: 588 LKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L + H+VV PGR+ DH+ + L +IK +VLDEAD + F +ETI P
Sbjct: 121 SALRRGVHVVVGTPGRVIDHLEK-GSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTP 179
Query: 768 SKRQXLLFSAT 800
RQ LFSAT
Sbjct: 180 ESRQTALFSAT 190
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 120 bits (288), Expect = 6e-26
Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = +3
Query: 264 LGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE 443
L + P + K L + GI +PIQ + L G D IG A+TGSGKT F +P ++ +
Sbjct: 9 LDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEV 68
Query: 444 DPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLAKRPHIVV 620
+ + A++L PT ELA Q+A Q + + ++V + GG + L PHI+V
Sbjct: 69 NDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSPHIIV 128
Query: 621 AMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGR+ DH+ L+ +K VLDEADR+ F L IF P + Q LLFSAT
Sbjct: 129 GTPGRVMDHVEK-RRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTLLFSAT 187
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 120 bits (288), Expect = 6e-26
Identities = 70/182 (38%), Positives = 99/182 (54%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ ++K + +G +TPT +Q I +L +D I +KTGSGKT F + I+Q
Sbjct: 5 FNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQL 64
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
+ G L+LTP ELA Q+ + + + LK + + G + E+ L K I
Sbjct: 65 TNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVSI 124
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
V PGR+ DHIS T S K I++LVLDEADR+ F ++ I LP +R LLFS
Sbjct: 125 VTGTPGRVFDHISH-GTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLFS 183
Query: 795 AT 800
AT
Sbjct: 184 AT 185
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 120 bits (288), Expect = 6e-26
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Frame = +3
Query: 279 WLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH-----LAE 443
+++ + G + PTPIQ L+G D IG A+TGSGKT AF LP I H L
Sbjct: 220 YILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQALLR 279
Query: 444 DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVA 623
G LVL PT ELA QI + + G+ KL+ + GG + +++ L + I++A
Sbjct: 280 PGDGPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIA 339
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGRL D + T +L+++ YLVLDEADR+ F ++ I + RQ L+FSAT
Sbjct: 340 CPGRLIDFLESSVT-NLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSAT 397
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 120 bits (288), Expect = 6e-26
Identities = 72/183 (39%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Frame = +3
Query: 267 GVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH-LAE 443
G+ L+ L G + PT IQ I +L+G D IG A TGSGKT AF +P + H LA+
Sbjct: 107 GLPAPLMSHLRLRGFKQPTSIQCQAIPCILSGRDIIGCAVTGSGKTLAFIIPCLLHVLAQ 166
Query: 444 DPYGIF---ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR-PH 611
P G + A++L+PT ELAYQ + + + + + GG+D IE L+ K +
Sbjct: 167 PPTGQYEAAAVILSPTRELAYQTHIECQKIFSLMDKKSACLVGGND-IENQLRAIKNGSN 225
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
+++A PGR D +S F++KK+ YLV+DEADR+F F ++ I + RQ L+F
Sbjct: 226 VIIATPGRFIDLLSS-SAFNIKKVSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTLMF 284
Query: 792 SAT 800
SAT
Sbjct: 285 SAT 287
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 120 bits (288), Expect = 6e-26
Identities = 71/199 (35%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K T + F + +++ L +L PTPIQ I L G D + A TGSGKT
Sbjct: 326 KSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTA 385
Query: 408 AFALPIIQHLA-----EDPYGIFA--LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGG 566
AF +P I+ L P+ + L+L PT ELA Q + + +R C+ GG
Sbjct: 386 AFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGG 445
Query: 567 SDQIEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLE 746
+ +L RP +V+A PGRL DH+ +F+L I+ LV+DEADR+ + F L
Sbjct: 446 LSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELN 505
Query: 747 TIFSALP-SKRQXLLFSAT 800
I + P RQ +LFSAT
Sbjct: 506 EIVKSCPKGARQTMLFSAT 524
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 119 bits (287), Expect = 9e-26
Identities = 70/189 (37%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
N F +G+ +I+ +L G + PTPIQ+ I L G D + A+TGSGKT F +
Sbjct: 35 NKSGGFQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLI 94
Query: 420 PIIQHL--AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK 593
P+ + L + G AL+L+PT ELA Q +G+ L+ ++ GG +
Sbjct: 95 PMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSA 154
Query: 594 LAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSK 773
+ P I+VA PGR HI +LK I++++ DEADRLF F ++ I + LP
Sbjct: 155 IHGNPDIIVATPGRFL-HICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKN 213
Query: 774 RQXLLFSAT 800
RQ LLFSAT
Sbjct: 214 RQTLLFSAT 222
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 119 bits (287), Expect = 9e-26
Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
E+ L + + K L G T IQ I LL G D + A+TGSGKT AF +PI++
Sbjct: 82 EYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVE 141
Query: 432 HLAEDPY----GIFALVLTPTHELAYQIADQFT-ILGQPLKLRVCIVTGGSDQIEESLKL 596
L + + G A++++PT ELA Q D IL + R I+ GGS + +E L
Sbjct: 142 ILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAHSERTRTLII-GGSSKKKEEEAL 200
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
K IVVA PGRL DHI F + +K LV+DEADR+ F + I + LP R
Sbjct: 201 KKGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR 260
Query: 777 QXLLFSAT 800
Q +LFSAT
Sbjct: 261 QTMLFSAT 268
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 119 bits (287), Expect = 9e-26
Identities = 68/170 (40%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Frame = +3
Query: 306 GIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE-----DPYGIFALV 470
G TPTPIQ I +L G D +G A+TG+GKT AF+LPI+Q+L++ +P L+
Sbjct: 23 GYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLI 82
Query: 471 LTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHI 650
LTPT ELA QI + + L ++ ++ GG Q + L I++A PGRL D +
Sbjct: 83 LTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMD-L 141
Query: 651 SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
G L +++ VLDEADR+ F ++ I LP KR L FSAT
Sbjct: 142 HGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFSAT 191
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 119 bits (287), Expect = 9e-26
Identities = 82/195 (42%), Positives = 101/195 (51%), Gaps = 5/195 (2%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
MTE F LG+ L++ L LG PTPIQ I LL G D G A+TG+GKT A
Sbjct: 1 MTETS-VSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAA 59
Query: 411 FALPIIQHLAEDPY-----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQ 575
FALP I +LA +P G L+L+PT ELA QIA + L++ V V GG
Sbjct: 60 FALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPI 119
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIF 755
+ L + I+VA PGRL D I LK ++ VLDEAD++ F L I
Sbjct: 120 GRQMRMLDRGTDILVATPGRLLDLIDQ-RALVLKDVEVFVLDEADQMLDLGFIHALRRID 178
Query: 756 SALPSKRQXLLFSAT 800
LP RQ L FSAT
Sbjct: 179 KLLPKNRQTLFFSAT 193
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 119 bits (287), Expect = 9e-26
Identities = 62/165 (37%), Positives = 91/165 (55%)
Frame = +3
Query: 306 GIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIFALVLTPTH 485
G PTP+Q + G D I +KTG+GKT AF LP+++ + D + AL+L PT
Sbjct: 48 GYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTR 107
Query: 486 ELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDT 665
ELA Q+AD+ +L + L++ + GG+ ++ L + I+V PGR+ DHI+
Sbjct: 108 ELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPIIVGTPGRVFDHINR-GN 166
Query: 666 FSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L + VLDEAD + ++ F + I LP RQ LLFSAT
Sbjct: 167 LKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLLFSAT 211
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 119 bits (287), Expect = 9e-26
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 7/191 (3%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K +A GV ++ L PT IQ I +++G D IG AKTGSGKT AF LP+
Sbjct: 304 KTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMF 363
Query: 429 QHLAEDPY-----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK 593
+H+ + P G A++L PT ELA Q + +PL L+V GG E+
Sbjct: 364 RHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIAD 423
Query: 594 LAKRPHIVVAMPGRLADHISGCD--TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L + IVV PGR+ D ++ +L+++ YLVLDEADR+F + F ++ + + +
Sbjct: 424 LKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIR 483
Query: 768 SKRQXLLFSAT 800
+Q +LFSAT
Sbjct: 484 PDKQTVLFSAT 494
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 119 bits (287), Expect = 9e-26
Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Frame = +3
Query: 321 TPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY----GIFALVLTPTHE 488
TP+QKG + L G D +GAAKTGSGKT F +P+++ L + + G+ AL+L+PT E
Sbjct: 93 TPVQKGTLHLALAGLDVLGAAKTGSGKTLCFVIPVLERLYRERWSSDMGVGALLLSPTRE 152
Query: 489 LAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDTF 668
LA QI ++G L ++TGG D ++E K I+V PGR+ H+
Sbjct: 153 LALQIFKVMQLVGYKHVLSAALLTGGRD-VQEERKRLHAISIIVGTPGRVLHHLQDDAEL 211
Query: 669 SLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L ++ +DEADRL F + +I + LP +RQ LLFSAT
Sbjct: 212 VLDNLQLFCMDEADRLLDMGFREAITSILAYLPPQRQSLLFSAT 255
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 119 bits (287), Expect = 9e-26
Identities = 67/175 (38%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY--G 455
L K++ PTPIQ +++G D IG A+TGSGKT A+ LP + H+ G
Sbjct: 82 LNKRISLKAYNRPTPIQASVFPIIMSGHDLIGIAQTGSGKTIAYLLPGLVHIESQRKKGG 141
Query: 456 IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGR 635
L+L PT ELA QI + + + + + GG+D+ + + LA+ P IVVA PGR
Sbjct: 142 PMMLILVPTRELAMQIQEHISYFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGR 201
Query: 636 LADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L D + T +L + YLVLDEADR+ F ++ I S + RQ + FSAT
Sbjct: 202 LIDFLDAQVT-NLHNVTYLVLDEADRMLDMGFEQQVRKIDSYIREDRQTVFFSAT 255
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 119 bits (287), Expect = 9e-26
Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F L + K + +G T IQ I L+ G+D +GAA+TGSGKT AF +P +
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213
Query: 429 QHLAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
+ L + G LV+ PT ELA Q L + V V GG + E+ L
Sbjct: 214 ELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEIL 273
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKR 776
AK +++VA PGRL DH+ + F K +K+LV+DEADR+ ++F L+ I + LP R
Sbjct: 274 AKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR 333
Query: 777 QXLLFSAT 800
Q LFSAT
Sbjct: 334 QTSLFSAT 341
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 119 bits (287), Expect = 9e-26
Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 18/203 (8%)
Frame = +3
Query: 246 GKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGD--DCIGAAKTGSGKTFAFAL 419
G F +G+ P L++ LL G TPTPIQ+ I +++ D +G A+TGSGKT A+ +
Sbjct: 143 GGSFQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLI 202
Query: 420 PIIQHL--AEDP-YGIFALVLTPTHELAYQIADQFTILGQPLK-------------LRVC 551
P+I L P +GI +L+L P+ ELA QI + + K +R
Sbjct: 203 PLINRLNGRHSPTFGIKSLILCPSRELAVQILRVGKEIARGWKADAGEGQDSRGEAIRWA 262
Query: 552 IVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESF 731
I+ GG E+ ++ P +V+A PGR+ H++ LK ++Y+V DEADRLF F
Sbjct: 263 IIVGGESLDEQFGIMSNNPDVVIATPGRML-HLTVEMNLDLKSVEYVVFDEADRLFEMGF 321
Query: 732 XXRLETIFSALPSKRQXLLFSAT 800
+LE + LP RQ LLFSAT
Sbjct: 322 AEQLEEMLLRLPPTRQTLLFSAT 344
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 119 bits (286), Expect = 1e-25
Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F G+ L + L L + TPTPIQ+ I L G D +G A+TG+GKT AFALP++ H
Sbjct: 6 FDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLHH 65
Query: 435 L-----AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
L AL+L+PT ELA QIA+ L + + C+V GG + LA
Sbjct: 66 LMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALA 125
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
+ I+VA PGRL D + L++ ++L+LDEADR+ F + I P RQ
Sbjct: 126 RGVDILVATPGRLLD-LMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQ 184
Query: 780 XLLFSAT 800
++FSAT
Sbjct: 185 SMMFSAT 191
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 119 bits (286), Expect = 1e-25
Identities = 68/163 (41%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF--ALVLTPTHEL 491
P+PIQ I L G D +G A+TG+GKT AF +PII+ L P AL+LTPT EL
Sbjct: 27 PSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTREL 86
Query: 492 AYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDTFS 671
A Q+ D+ L ++ V V GG + KL + PHIVV PGR+ D ++
Sbjct: 87 AVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTR-RALQ 145
Query: 672 LKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L+ ++ +VLDEADR+ F +E I P +RQ LL SAT
Sbjct: 146 LEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLLSAT 188
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 119 bits (286), Expect = 1e-25
Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 4/165 (2%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE----DPYGIFALVLTPTH 485
PT IQ+ I+ LTG D +GAAKTGSGKT A +P+++ L YG+ AL+++PT
Sbjct: 99 PTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTR 158
Query: 486 ELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDT 665
ELA Q +G +V GGSD E +++ +I+V PGRL H+
Sbjct: 159 ELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRISGI-NIIVCTPGRLLQHMDENAQ 217
Query: 666 FSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
S ++ LVLDEADR+ F +L +I + LP++RQ LLFSAT
Sbjct: 218 MSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSAT 262
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 118 bits (285), Expect = 1e-25
Identities = 69/185 (37%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
FA LG+ ++++L G+ TP PIQ I L G D +G +TGSGKT +F LP +
Sbjct: 63 FADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLAT 122
Query: 435 LA---EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
LA + + A++LTPT ELA Q+AD G L L++ +V GG+ + L +
Sbjct: 123 LAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERG 182
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
++VA PGRL D I+ SL+ ++ VLDEAD++ F + + +P+ Q +
Sbjct: 183 VDVLVATPGRLRDIINR-GACSLENVQIAVLDEADQMSDLGFLPEVTELLDQVPAGGQRM 241
Query: 786 LFSAT 800
LFSAT
Sbjct: 242 LFSAT 246
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 118 bits (285), Expect = 1e-25
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ L + + L LG TP+Q + +L+G D AKTGSGKT AF + ++
Sbjct: 6 FSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLDR 65
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQ-PLKLRVCIVTGGSDQIEESLKLAKRPH 611
+ + ALVL PT ELA Q++ + L + +++ + GG ++ L PH
Sbjct: 66 IVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAPH 125
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
IVV PGR+ DH+ + +L +K LVLDEADR+ F ++ + S PS RQ LLF
Sbjct: 126 IVVGTPGRIQDHLRK-QSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLF 184
Query: 792 SAT 800
SAT
Sbjct: 185 SAT 187
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 118 bits (285), Expect = 1e-25
Identities = 71/177 (40%), Positives = 95/177 (53%), Gaps = 4/177 (2%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
L++ + LG PTPIQ I L G D G A TG+GKT A+ LP ++ L P
Sbjct: 168 LMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNK 227
Query: 462 A----LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMP 629
A LVL PT EL Q+ L Q + V + GG D + L + P IV+A P
Sbjct: 228 AITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATP 287
Query: 630 GRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
GRL DHI +F+L I+ L+LDEADR+ E F +++ I ++ RQ +LFSAT
Sbjct: 288 GRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSAT 344
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 118 bits (285), Expect = 1e-25
Identities = 73/184 (39%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGV-KPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
F+ L V P + L LG T TP+Q + +L G D AKTGSGKT AF L ++Q
Sbjct: 4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ 63
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLAKRP 608
+ + ALVL PT ELA Q+A + L + L ++ + GG + L P
Sbjct: 64 QIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAP 123
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
HI+VA PGRL DH+ T SL + LV+DEADR+ F ++ + P+ RQ LL
Sbjct: 124 HIIVATPGRLLDHLQK-GTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLL 182
Query: 789 FSAT 800
FSAT
Sbjct: 183 FSAT 186
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 118 bits (284), Expect = 2e-25
Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Frame = +3
Query: 225 VKMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKT 404
+++T+ + FA LG+ L+K + G+ P PIQ I L G D +G A+TGSGKT
Sbjct: 79 IELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKT 138
Query: 405 FAFALPIIQHL-----AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGS 569
AF+LPI+Q + P AL+L PT ELA QI + + + +V GG
Sbjct: 139 AAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGV 198
Query: 570 DQIEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLET 749
++ + ++A +++A PGRL D + L + ++LVLDEADR+ F ++
Sbjct: 199 SKLSQIKRIAPGIDVLIATPGRLTD-LMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKR 257
Query: 750 IFSALPSKRQXLLFSAT 800
I A ++RQ LFSAT
Sbjct: 258 IAKATHAERQTALFSAT 274
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 118 bits (284), Expect = 2e-25
Identities = 73/190 (38%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Frame = +3
Query: 243 DGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALP 422
D K+F L + + L G T IQ +S L G D +GAA+TGSGKT AF +P
Sbjct: 56 DLKQFTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIP 115
Query: 423 IIQHLAEDPYG----IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
+++ L +G + ALV++PT ELA QI + +G +V GG D +E
Sbjct: 116 VLEILYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQEKD 175
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
+L+ R +I++A PGRL H+ F ++ LVLDEADR+ F L I LP
Sbjct: 176 RLS-RINILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPR 234
Query: 771 KRQXLLFSAT 800
RQ +LFSAT
Sbjct: 235 NRQTMLFSAT 244
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 118 bits (283), Expect = 3e-25
Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F L + P + + + G TP+PIQ I L G D IG A+TG+GKT AF++PI++
Sbjct: 46 FDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILEQ 105
Query: 435 L--AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
L ED A+V+ PT ELA Q+A + L + + + +++GG + + +L
Sbjct: 106 LDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLENGT 165
Query: 609 HIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLL 788
+VV PGR+ DH+ T + +VLDEADR+ F ++E I P RQ LL
Sbjct: 166 QLVVGTPGRVHDHLQR-GTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQTLL 224
Query: 789 FSAT 800
SAT
Sbjct: 225 LSAT 228
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 118 bits (283), Expect = 3e-25
Identities = 70/182 (38%), Positives = 95/182 (52%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F LG+ + + + G PTP+Q + G D I +KTG+GKT AFA+PI++
Sbjct: 22 FDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILER 81
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
+A+ ALV+ PT ELA Q+A +FT L + L V V GG+ E+ KL I
Sbjct: 82 IADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAEI 141
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
+V PGR+ DHI T L + LDEAD + + F + I LP Q LLFS
Sbjct: 142 IVGTPGRIYDHIRR-RTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFS 200
Query: 795 AT 800
AT
Sbjct: 201 AT 202
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 118 bits (283), Expect = 3e-25
Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIF 461
L+ L TLG T T IQ+ I +L G D + +KTGSGKT AF +P +
Sbjct: 14 LLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNKPQ 73
Query: 462 ALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRL 638
+V+TPT ELA Q+A + I L++ + GG ++ LAK HI++ PGR+
Sbjct: 74 TIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIGTPGRI 133
Query: 639 ADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
DH++ T +L+ IK LVLDEADR+ F + I S +P ++Q LLFSAT
Sbjct: 134 QDHLAK-GTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSAT 186
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 117 bits (282), Expect = 3e-25
Identities = 72/183 (39%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGD-DCIGAAKTGSGKTFAFALPIIQ 431
F LG+ + + G R PTPIQ I RLL GD + I A+TG+GKT AF LP+IQ
Sbjct: 48 FEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLIQ 107
Query: 432 HLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH 611
L ALVL PT ELA Q+A + + L R+ V GG E+ L +
Sbjct: 108 ELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGGE 167
Query: 612 IVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLF 791
I+V GR+ DHI + L ++Y +LDEAD + + F +E+IFS + L+F
Sbjct: 168 IIVGTTGRVIDHIER-GSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMF 226
Query: 792 SAT 800
SAT
Sbjct: 227 SAT 229
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 117 bits (282), Expect = 3e-25
Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = +3
Query: 240 NDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFAL 419
+D FA LG+ + + + +G PTPIQ I +L G D +G A+TG+GKT +F L
Sbjct: 220 DDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTL 279
Query: 420 PIIQHLAEDPYGIF---ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
P++ L++ +L+L PT ELA Q+A+ F GQ LKL ++ GG ++
Sbjct: 280 PMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRD 339
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
L+K +++A PGRL D + L + LV+DEADR+ F +E I S LP
Sbjct: 340 VLSKGVDVLIATPGRLID-LFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPH 398
Query: 771 KRQXLLFSAT 800
RQ L FSAT
Sbjct: 399 NRQTLFFSAT 408
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 117 bits (282), Expect = 3e-25
Identities = 76/209 (36%), Positives = 100/209 (47%), Gaps = 27/209 (12%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F + + ++K G PTPIQ+ CI LTG D A TG+GKT AF LPI++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 435 LAEDPYGIFA---LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
+ P G LVL PT ELA Q+ F L ++L VC+ GG D + L
Sbjct: 210 MIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSG 269
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKI------------------------KYLVLDEADR 713
P +VVA PGRL DH+ +F+L I + LVLDEADR
Sbjct: 270 PDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADR 329
Query: 714 LFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ E+F ++ + RQ LLFSAT
Sbjct: 330 MLEEAFRDQMNELIRLCAQNRQTLLFSAT 358
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 117 bits (282), Expect = 3e-25
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Frame = +3
Query: 273 KPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLA--ED 446
KP +I+ L PT +Q I ++L+G D A TGSGK+ AF +PI+Q L
Sbjct: 16 KP-IIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFLIPIVQKLLTFRG 74
Query: 447 PYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAM 626
G AL+++PT ELA Q+ +L + +V GG E+ L P I++
Sbjct: 75 LPGPKALIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQRELLTPAPDIIIGT 134
Query: 627 PGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGR D I L+ +++ VLDEADRL + F +L TI S LP K Q LLF+AT
Sbjct: 135 PGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQLPEKHQTLLFTAT 192
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 117 bits (282), Expect = 3e-25
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Frame = +3
Query: 285 IKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY---- 452
+K + +G T IQ I LL G D + AAKTGSGKT AF +P ++ + + +
Sbjct: 191 LKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRN 250
Query: 453 GIFALVLTPTHELAYQIADQFTILGQPLKLRVC---IVTGGSDQIEESLKLAKRPHIVVA 623
G L+L+PT ELA Q F +L + + V ++ GGS++ E+ KL +I+VA
Sbjct: 251 GTGVLILSPTRELAMQT---FGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVA 307
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGRL DH+ F K ++ LV+DEADR+ F L+ I LP++RQ +LFSAT
Sbjct: 308 TPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSAT 366
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 117 bits (281), Expect = 5e-25
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K+FA L + LIK + +LG T IQ+ + +L G D I AKTG+GKT AF L ++
Sbjct: 4 KDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVL 63
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPL-KLRVCIVTGGSDQIEESLKLAKR 605
L D Y I L+L PT EL Q++ L + + +++ + GG + +A
Sbjct: 64 SKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHG 123
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
HIVV PGR+ H++ + SL ++ LVLDEADR+ F ++ I +RQ L
Sbjct: 124 AHIVVGTPGRILKHLNK-SSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTL 182
Query: 786 LFSAT 800
LFSAT
Sbjct: 183 LFSAT 187
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 117 bits (281), Expect = 5e-25
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH-LAEDPYGI---FALVLTPTH 485
PTPIQK + LTG D IG ++TGSGKT F LP + H LA+ P G L+L+PT
Sbjct: 342 PTPIQKVGWTSCLTGRDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGTGGPIMLILSPTR 401
Query: 486 ELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDT 665
EL QIA++ + L LR+ + GG+ + + +L I+VA PGRL + +S T
Sbjct: 402 ELCLQIAEEARPYSRLLNLRLVPIYGGASKFAQVRELQNGAEIMVATPGRLLEFLSN-GT 460
Query: 666 FSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
L ++ Y V+DEADR+ F ++ I + RQ L+FSAT
Sbjct: 461 IKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSAT 505
>UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicase,
putative; n=4; Plasmodium|Rep: DEAD/DEAH box
ATP-dependent RNA helicase, putative - Plasmodium vivax
Length = 599
Score = 117 bits (281), Expect = 5e-25
Identities = 74/187 (39%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Frame = +3
Query: 252 EFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
+F L + L K L L T T IQ CI L G D +GAAKTGSGKT AF +P I
Sbjct: 147 KFEDLDICEALKKGLKELNFVTLTEIQAKCIPHFLNGKDILGAAKTGSGKTLAFLVPSIN 206
Query: 432 HLAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLA 599
L + G L+++PT EL QI L + + I+ GG + EE K
Sbjct: 207 ILYNIKFLPKNGTGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIIIGGMSRNEEKKKFI 266
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
+I++A PGRL DH+ F K + L++DEADRL F + I LP KRQ
Sbjct: 267 HGINILIATPGRLLDHMQNTKEFIYKNLISLIIDEADRLLQIGFEEEINLIVKRLPKKRQ 326
Query: 780 XLLFSAT 800
LFSAT
Sbjct: 327 TALFSAT 333
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 117 bits (281), Expect = 5e-25
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Frame = +3
Query: 291 QLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP--YGIFA 464
++ T R PTPIQK I +L D + +KTGSGKT +F LPI+Q L E G
Sbjct: 14 KVATTMYRKPTPIQKEVIPVVLADHDVVAMSKTGSGKTASFLLPIVQKLNEHSTITGCRC 73
Query: 465 LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLAD 644
L++TP+ ELA Q F L+ + GG + L K P +++A PGRL
Sbjct: 74 LIITPSRELALQTGHYFQKYASQTNLKCAQIIGGEALPPQFESLTKNPDVIIATPGRLLQ 133
Query: 645 HISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
I+ +SL +++ +V+DEAD LF + ++ I LP K Q LLFSAT
Sbjct: 134 IIAETQ-YSLSRVQIIVIDEADLLFEQGLEPQMTAILKLLPEKHQSLLFSAT 184
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 117 bits (281), Expect = 5e-25
Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 8/186 (4%)
Frame = +3
Query: 267 GVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAED 446
G+ ++ L L P PIQ + +++G DCIG AKTGSGKT F LP+++H+ +
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 461
Query: 447 P-----YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCI-VTGGSDQIEESLKLAKRP 608
P G LV+ PT EL QI + L + +C+ V GGS ++ +L +
Sbjct: 462 PPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGI-ICVPVYGGSGVAQQISELKRGT 520
Query: 609 HIVVAMPGRLADHI--SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQX 782
IVV PGR+ D + S +L+++ YLV+DEADR+F F ++ I + RQ
Sbjct: 521 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQT 580
Query: 783 LLFSAT 800
+LFSAT
Sbjct: 581 VLFSAT 586
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 117 bits (281), Expect = 5e-25
Identities = 71/195 (36%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K+ N+ F+ + +K L R T IQK I L G D +GAAKTGSGKT
Sbjct: 62 KINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTL 121
Query: 408 AFALPIIQHLAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQ 575
AF +P+++ L + G+ L+++PT ELAYQ + +G+ ++ GG D
Sbjct: 122 AFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDL 181
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIF 755
E+ ++ +I+V PGRL H+ F ++ LVLDEADR+ F + I
Sbjct: 182 KHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 756 SALPSKRQXLLFSAT 800
LP KRQ LLFSAT
Sbjct: 241 ENLPKKRQTLLFSAT 255
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 117 bits (281), Expect = 5e-25
Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Frame = +3
Query: 228 KMTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTF 407
K+ N+ F+ + +K L R T IQK I L G D +GAAKTGSGKT
Sbjct: 62 KINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTL 121
Query: 408 AFALPIIQHLAEDPY----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQ 575
AF +P+++ L + G+ L+++PT ELAYQ + +G+ ++ GG D
Sbjct: 122 AFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDL 181
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIF 755
E+ ++ +I+V PGRL H+ +F ++ LVLDEADR+ F + +
Sbjct: 182 KHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 756 SALPSKRQXLLFSAT 800
LP KRQ LLFSAT
Sbjct: 241 ENLPKKRQTLLFSAT 255
>UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE48840p - Nasonia vitripennis
Length = 1378
Score = 116 bits (280), Expect = 6e-25
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 7/179 (3%)
Frame = +3
Query: 285 IKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY---- 452
+K + +G T IQ I LL G D +GAAKTGSGKT +F +P ++ + + +
Sbjct: 219 LKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKLKFMPRN 278
Query: 453 GIFALVLTPTHELAYQIADQFTILGQPLKLRVC---IVTGGSDQIEESLKLAKRPHIVVA 623
G ++++PT EL+ Q F +L + +K ++ GG+ + E+ KL+K +IVVA
Sbjct: 279 GTGCIIISPTRELSMQT---FGVLKELMKYHYHTYGLLMGGASRQTEAQKLSKGVNIVVA 335
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGRL DH+ F K ++ L++DEADR+ F L+ I + LP +RQ +LFSAT
Sbjct: 336 TPGRLLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRRQTMLFSAT 394
>UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to RE48840p -
Nasonia vitripennis
Length = 1134
Score = 116 bits (280), Expect = 6e-25
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 7/179 (3%)
Frame = +3
Query: 285 IKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY---- 452
+K + +G T IQ I LL G D +GAAKTGSGKT +F +P ++ + + +
Sbjct: 644 LKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKLKFMPRN 703
Query: 453 GIFALVLTPTHELAYQIADQFTILGQPLKLRVC---IVTGGSDQIEESLKLAKRPHIVVA 623
G ++++PT EL+ Q F +L + +K ++ GG+ + E+ KL+K +IVVA
Sbjct: 704 GTGCIIISPTRELSMQT---FGVLKELMKYHYHTYGLLMGGASRQTEAQKLSKGVNIVVA 760
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGRL DH+ F K ++ L++DEADR+ F L+ I + LP +RQ +LFSAT
Sbjct: 761 TPGRLLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRRQTMLFSAT 819
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,698,399
Number of Sequences: 1657284
Number of extensions: 15351326
Number of successful extensions: 39895
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 36618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38097
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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