Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C09
         (879 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   110   6e-26

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  110 bits (264), Expect = 6e-26
 Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
 Frame = +3

Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL--AEDPYGI-----FALVLT 476
           PTPIQ+  I  +L G D +  A+TGSGKT AF LP+I HL   ED   +     + +++ 
Sbjct: 197 PTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVA 256

Query: 477 PTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP-HIVVAMPGRLADHIS 653
           PT ELA QI D+        KL+VC+  GG+  ++  L+L +   H++VA PGRL D I 
Sbjct: 257 PTRELAIQIHDEGRKFAHGTKLKVCVSYGGT-AVQHQLQLMRGGCHVLVATPGRLLDFID 315

Query: 654 -GCDTFSLKKIKYLVLDEADRLFSESFXXRLETIF--SALPSK--RQXLLFSAT 800
            G  TF  + + ++VLDEADR+    F   +E +   + +P K  RQ L+FSAT
Sbjct: 316 RGYVTF--ENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSAT 367


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,612
Number of Sequences: 2352
Number of extensions: 16562
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)