Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C09
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 206 1e-53
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 206 1e-53
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 176 1e-44
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 126 2e-29
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 126 3e-29
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 124 1e-28
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 124 1e-28
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 119 2e-27
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 119 3e-27
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 117 1e-26
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 115 5e-26
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 115 5e-26
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 109 3e-24
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 107 1e-23
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 103 2e-22
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 103 2e-22
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 103 2e-22
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 102 3e-22
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 102 4e-22
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 98 8e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 98 8e-21
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 97 2e-20
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 95 4e-20
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 94 1e-19
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 92 4e-19
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 92 4e-19
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 91 1e-18
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 85 5e-17
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 84 1e-16
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 84 1e-16
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 84 1e-16
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 84 1e-16
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 80 2e-15
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 80 2e-15
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 79 3e-15
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 79 3e-15
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 79 3e-15
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 76 3e-14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 76 3e-14
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 75 7e-14
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 74 2e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 72 5e-13
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 71 8e-13
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 50 3e-06
AC024806-5|AAF59526.1| 208|Caenorhabditis elegans Hypothetical ... 40 0.003
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.82
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 31 1.1
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 31 1.4
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 30 1.9
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 30 1.9
AF068713-11|AAC17792.1| 315|Caenorhabditis elegans Serpentine r... 30 1.9
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 3.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.3
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 3.3
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 29 3.3
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 29 3.3
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 29 3.3
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 29 3.3
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 29 3.3
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 4.4
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 29 5.8
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 206 bits (504), Expect = 1e-53
Identities = 98/187 (52%), Positives = 137/187 (73%), Gaps = 3/187 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K+F+ LGV W+ +QL T+ I+T TP+Q CI ++L G D +G A+TG+GKT AFA+PI+
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
Q L+ DPYGI+AL+LTPT ELA+QIA+QFT LG+P+ L+ ++ GG I ++ +L++RP
Sbjct: 149 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 208
Query: 609 HIVVAMPGRLADHI-SGCDTFS--LKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
H+VVA PGRLAD I S DT + KKI++ VLDEADR+ + +L+ IF ++ KRQ
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 780 XLLFSAT 800
LL SAT
Sbjct: 269 TLLLSAT 275
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 206 bits (504), Expect = 1e-53
Identities = 98/187 (52%), Positives = 137/187 (73%), Gaps = 3/187 (1%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K+F+ LGV W+ +QL T+ I+T TP+Q CI ++L G D +G A+TG+GKT AFA+PI+
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRP 608
Q L+ DPYGI+AL+LTPT ELA+QIA+QFT LG+P+ L+ ++ GG I ++ +L++RP
Sbjct: 149 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 208
Query: 609 HIVVAMPGRLADHI-SGCDTFS--LKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQ 779
H+VVA PGRLAD I S DT + KKI++ VLDEADR+ + +L+ IF ++ KRQ
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 780 XLLFSAT 800
LL SAT
Sbjct: 269 TLLLSAT 275
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 176 bits (429), Expect = 1e-44
Identities = 89/193 (46%), Positives = 118/193 (61%), Gaps = 2/193 (1%)
Frame = +3
Query: 228 KMTENDGKE--FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGK 401
K E D KE FA LGV L LG P+ IQ+ + L G D IG A+TGSGK
Sbjct: 35 KDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGK 94
Query: 402 TFAFALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
T AFA+P++Q L + P F LVLTPT ELA+QI QF LG + L ++ GG D
Sbjct: 95 TGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAA 154
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSA 761
+++ LA+RPHI+VA PGRL DH+ F+LK +K+L++DEADR+ + F L+ I
Sbjct: 155 QAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKV 214
Query: 762 LPSKRQXLLFSAT 800
+P +R+ LFSAT
Sbjct: 215 IPRERRTYLFSAT 227
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 126 bits (304), Expect = 2e-29
Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY--- 452
L+K + LG T T IQ I LL G D + +AKTGSGKT AF LP I+ L + +
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 453 -GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMP 629
G ++++PT EL+ Q + L + L +V GGS++ E KLAK I+VA P
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 630 GRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
GRL DH+ D F ++ +K L++DEADR+ F ++ + LP +RQ +LFSAT
Sbjct: 199 GRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSAT 255
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 126 bits (303), Expect = 3e-29
Identities = 68/190 (35%), Positives = 109/190 (57%)
Frame = +3
Query: 231 MTENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFA 410
+T+ G EF + L+ + G P+PIQ+ I LTG D + AK G+GKT A
Sbjct: 37 VTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGA 96
Query: 411 FALPIIQHLAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESL 590
+ +P+I+ + I A+V+ PT ELA Q + L + ++L+V + TGG+D ++ +
Sbjct: 97 YCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIM 156
Query: 591 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPS 770
+L H+V+A PGR+ D + ++ K LVLDEAD+L S+ F L+ + + LP
Sbjct: 157 RLNGTVHLVIATPGRILD-LMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPK 215
Query: 771 KRQXLLFSAT 800
+RQ +L+SAT
Sbjct: 216 ERQVMLYSAT 225
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 124 bits (298), Expect = 1e-28
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Frame = +3
Query: 264 LGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-A 440
+G+ + K + G PTPIQ+ I ++ G D + ++TGSGKT AF +P++Q L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 441 EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKRPHIV 617
D GI AL+++PT ELA Q LG+ LR + GG DQIEE + + P I+
Sbjct: 89 RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG-DQIEEQFSTIHENPDIL 147
Query: 618 VAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSA 797
+A PGRL I D L ++Y+V DEADRLF F +L +P RQ LLFSA
Sbjct: 148 LATPGRLLHVIVEMD-LRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSA 206
Query: 798 TXHLMCVN 821
T M V+
Sbjct: 207 TLPKMLVD 214
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 124 bits (298), Expect = 1e-28
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Frame = +3
Query: 264 LGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-A 440
+G+ + K + G PTPIQ+ I ++ G D + ++TGSGKT AF +P++Q L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 441 EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK-LAKRPHIV 617
D GI AL+++PT ELA Q LG+ LR + GG DQIEE + + P I+
Sbjct: 89 RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG-DQIEEQFSTIHENPDIL 147
Query: 618 VAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSA 797
+A PGRL I D L ++Y+V DEADRLF F +L +P RQ LLFSA
Sbjct: 148 LATPGRLLHVIVEMD-LRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSA 206
Query: 798 TXHLMCVN 821
T M V+
Sbjct: 207 TLPKMLVD 214
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 119 bits (287), Expect = 2e-27
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 7/191 (3%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K +A GV ++ L PT IQ I +++G D IG AKTGSGKT AF LP+
Sbjct: 304 KTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMF 363
Query: 429 QHLAEDPY-----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLK 593
+H+ + P G A++L PT ELA Q + +PL L+V GG E+
Sbjct: 364 RHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIAD 423
Query: 594 LAKRPHIVVAMPGRLADHISGCD--TFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L + IVV PGR+ D ++ +L+++ YLVLDEADR+F + F ++ + + +
Sbjct: 424 LKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIR 483
Query: 768 SKRQXLLFSAT 800
+Q +LFSAT
Sbjct: 484 PDKQTVLFSAT 494
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 119 bits (286), Expect = 3e-27
Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 4/165 (2%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE----DPYGIFALVLTPTH 485
PT IQ+ I+ LTG D +GAAKTGSGKT A +P+++ L YG+ AL+++PT
Sbjct: 99 PTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTR 158
Query: 486 ELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDT 665
ELA Q +G +V GGSD E +++ +I+V PGRL H+
Sbjct: 159 ELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRISGI-NIIVCTPGRLLQHMDENAQ 217
Query: 666 FSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
S ++ LVLDEADR+ F +L +I + LP++RQ LLFSAT
Sbjct: 218 MSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSAT 262
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 117 bits (282), Expect = 1e-26
Identities = 76/209 (36%), Positives = 100/209 (47%), Gaps = 27/209 (12%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F + + ++K G PTPIQ+ CI LTG D A TG+GKT AF LPI++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 435 LAEDPYGIFA---LVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
+ P G LVL PT ELA Q+ F L ++L VC+ GG D + L
Sbjct: 210 MIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSG 269
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKI------------------------KYLVLDEADR 713
P +VVA PGRL DH+ +F+L I + LVLDEADR
Sbjct: 270 PDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADR 329
Query: 714 LFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ E+F ++ + RQ LLFSAT
Sbjct: 330 MLEEAFRDQMNELIRLCAQNRQTLLFSAT 358
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 115 bits (276), Expect = 5e-26
Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F + +K L++ + G P+ IQK I TG D I A++G+GKT F++ I+
Sbjct: 29 ESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSIL 88
Query: 429 QHLA-EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
Q + EDP+ + ALV+ PT ELA QI + LG+ L + + GG+ ++ KL
Sbjct: 89 QRIDHEDPH-VQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAG 147
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
H+VV PGR+ D I+ + +IK VLDEAD + S F ++ +F ++P Q +
Sbjct: 148 IHVVVGTPGRVGDMINR-NALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVV 206
Query: 786 LFSAT 800
L SAT
Sbjct: 207 LLSAT 211
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 115 bits (276), Expect = 5e-26
Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F + +K L++ + G P+ IQK I TG D I A++G+GKT F++ I+
Sbjct: 29 ESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSIL 88
Query: 429 QHLA-EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
Q + EDP+ + ALV+ PT ELA QI + LG+ L + + GG+ ++ KL
Sbjct: 89 QRIDHEDPH-VQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAG 147
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
H+VV PGR+ D I+ + +IK VLDEAD + S F ++ +F ++P Q +
Sbjct: 148 IHVVVGTPGRVGDMINR-NALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVV 206
Query: 786 LFSAT 800
L SAT
Sbjct: 207 LLSAT 211
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 109 bits (262), Expect = 3e-24
Identities = 69/180 (38%), Positives = 96/180 (53%), Gaps = 5/180 (2%)
Frame = +3
Query: 276 PWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPY- 452
P I +LL + PT IQ ++G D I AKTGSGKT AF LP + H+ + +
Sbjct: 138 PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHR 197
Query: 453 ----GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVV 620
G LVL PT ELA Q+ + L L++ + GG+ + ++ L + IVV
Sbjct: 198 QRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVV 257
Query: 621 AMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
A PGRL D + T ++KK YLVLDEADR+ F +++ I + RQ L+FSAT
Sbjct: 258 ATPGRLLDFLDN-GTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSAT 316
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 107 bits (257), Expect = 1e-23
Identities = 73/179 (40%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Frame = +3
Query: 306 GIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAED----PY----GIF 461
GI TPT IQ I L+G D IG A TGSGKT F LP++ E P+ G F
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 462 ALVLTPTHELAYQIAD----QFTILGQP--LKLRVCIVTGGSDQIEESLKLAKRPHIVVA 623
L++ P+ ELA QI D F LG+ ++R + GG E++ + HIVVA
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVA 328
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGRL+D ++ +L+ +YLVLDEADR+ F +++IF ++RQ LLFSAT
Sbjct: 329 TPGRLSDMLTK-KIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSAT 386
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 103 bits (246), Expect = 2e-22
Identities = 76/203 (37%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F G P +++ + G PTP+QK I LL D + A+TGSGKT AF LPII
Sbjct: 139 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 198
Query: 429 QH-LAEDP--------------YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTG 563
QH LA P Y ALVL+PT ELA QI + T ++ I+ G
Sbjct: 199 QHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYG 258
Query: 564 GSDQIEESL-KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXR 740
G + + + +L HI++A PGRL D I L +YLVLDEADR+ F +
Sbjct: 259 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQ-GFIGLAGCRYLVLDEADRMLDMGFEPQ 317
Query: 741 LETIF-SALPSK--RQXLLFSAT 800
+ I +P K R +FSAT
Sbjct: 318 IRKIVGQGMPPKTARTTAMFSAT 340
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 103 bits (246), Expect = 2e-22
Identities = 76/203 (37%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F G P +++ + G PTP+QK I LL D + A+TGSGKT AF LPII
Sbjct: 123 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 182
Query: 429 QH-LAEDP--------------YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTG 563
QH LA P Y ALVL+PT ELA QI + T ++ I+ G
Sbjct: 183 QHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYG 242
Query: 564 GSDQIEESL-KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXR 740
G + + + +L HI++A PGRL D I L +YLVLDEADR+ F +
Sbjct: 243 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQ-GFIGLAGCRYLVLDEADRMLDMGFEPQ 301
Query: 741 LETIF-SALPSK--RQXLLFSAT 800
+ I +P K R +FSAT
Sbjct: 302 IRKIVGQGMPPKTARTTAMFSAT 324
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 103 bits (246), Expect = 2e-22
Identities = 76/203 (37%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F G P +++ + G PTP+QK I LL D + A+TGSGKT AF LPII
Sbjct: 120 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 179
Query: 429 QH-LAEDP--------------YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTG 563
QH LA P Y ALVL+PT ELA QI + T ++ I+ G
Sbjct: 180 QHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYG 239
Query: 564 GSDQIEESL-KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXR 740
G + + + +L HI++A PGRL D I L +YLVLDEADR+ F +
Sbjct: 240 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQ-GFIGLAGCRYLVLDEADRMLDMGFEPQ 298
Query: 741 LETIF-SALPSK--RQXLLFSAT 800
+ I +P K R +FSAT
Sbjct: 299 IRKIVGQGMPPKTARTTAMFSAT 321
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 102 bits (245), Expect = 3e-22
Identities = 62/182 (34%), Positives = 95/182 (52%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G++ L++ + G P+ IQ+ I +L D I A++G+GKT F++ ++Q
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L AL+L+PT ELA QI LG + ++ GG++ E+ KL H+
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
V PGR+ D I + IK LVLDEAD + ++ F +L I+ LP Q +L S
Sbjct: 148 VSGTPGRVFDMIRR-RNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLS 206
Query: 795 AT 800
AT
Sbjct: 207 AT 208
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 102 bits (244), Expect = 4e-22
Identities = 61/182 (33%), Positives = 95/182 (52%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F +G++ L++ + G P+ IQ+ + +L D I A++G+GKT F++ ++Q
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 435 LAEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHI 614
L AL+L+PT ELA QI LG + ++ GG++ E+ KL H+
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 615 VVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFS 794
V PGR+ D I + IK LVLDEAD + ++ F +L I+ LP Q +L S
Sbjct: 148 VSGTPGRVFDMIRR-RNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLS 206
Query: 795 AT 800
AT
Sbjct: 207 AT 208
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 97.9 bits (233), Expect = 8e-21
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Frame = +3
Query: 303 LGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP---------YG 455
+G PTPIQ+ I L D IG A+TGSGKT AF LP++ + P G
Sbjct: 319 IGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLG 378
Query: 456 IFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGR 635
+A+++ PT ELA QI ++ G+ L ++ V GG+ + ++ +KL +V+A PGR
Sbjct: 379 PYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGR 438
Query: 636 LADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALP 767
L D + L + Y++LDEADR+ F ++ + +P
Sbjct: 439 LLDVLEN-RYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMP 481
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 97.9 bits (233), Expect = 8e-21
Identities = 67/176 (38%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Frame = +3
Query: 306 GIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL-----------AEDPY 452
G P+PIQ LL+G DCIG ++TGSGKT AF LP + H+ E
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 453 GIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPG 632
F LVL+PT ELA QI + VC+ GGS + E+ IV+A PG
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGS-RPEQVEACRGGVEIVIATPG 221
Query: 633 RLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
RL D +S SL + Y+VLDEADR+ F + I + R L SAT
Sbjct: 222 RLTD-LSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSAT 276
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 97.1 bits (231), Expect = 1e-20
Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP-----YGIFALVLTPT 482
PTPIQ I L+G D +G AKTGSGKT A+ P I H+ + P G A+++ PT
Sbjct: 288 PTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPT 347
Query: 483 HELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR-PHIVVAMPGRLADHISGC 659
ELA Q+ + + + GG + E+S +L +VV PGR+ D +
Sbjct: 348 RELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMG 407
Query: 660 DTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
T + + +LV DEADR+F F ++++I + RQ L+FSAT
Sbjct: 408 AT-NFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSAT 453
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 96.7 bits (230), Expect = 2e-20
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ L + W+ + + T G PTP+QK I L G D + A+TGSGKT AF +P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 435 LAED-PYGIF---------------ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGG 566
+ +D P + ALVL+PT EL+ QI ++ + ++ GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 567 SDQIEESL-KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRL 743
+ ++ + KL HI++A PGRL D + ++ +YLVLDEADR+ F ++
Sbjct: 288 RENYKDQIHKLRLGCHILIATPGRLID-VMDQGLIGMEGCRYLVLDEADRMLDMGFEPQI 346
Query: 744 ETIF--SALPSKRQXL--LFSAT 800
I + +PSK + + +FSAT
Sbjct: 347 RQIVECNRMPSKEERITAMFSAT 369
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 95.5 bits (227), Expect = 4e-20
Identities = 67/194 (34%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Frame = +3
Query: 237 ENDGKEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFA 416
E + K FA G+ ++K + LG +Q+ IS L + +G A+TGSGKT AF
Sbjct: 85 EPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFL 144
Query: 417 LPIIQHLA------EDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQI 578
+P++Q L + G A+++ PT EL QI F L Q L I ++
Sbjct: 145 IPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEE 204
Query: 579 EESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFS 758
E S+ L R H+VV PG+L S + + YLV+DEAD L S + + I S
Sbjct: 205 ENSVWLEDRSHVVVTTPGKLLRMCSLRPEY-CTLVSYLVMDEADLLLSFGYEEEMIKIRS 263
Query: 759 ALPSKRQXLLFSAT 800
LP Q L+ SAT
Sbjct: 264 KLPPTYQCLMTSAT 277
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 94.3 bits (224), Expect = 1e-19
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Frame = +3
Query: 270 VKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP 449
+KP +++ + G P+ +Q CI + + G D + AK+G GKT F + +Q L
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 450 YGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKR-PHIVVA 623
+ + + T ELA+QI+ ++ + L ++V + GG ++ +LA PHIVV
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXR-LETIFSALPSKRQXLLFSAT 800
PGR+ ++ L K+KY VLDE D++ ++ R ++ I P ++Q ++FSAT
Sbjct: 168 TPGRML-ALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSAT 226
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 94.3 bits (224), Expect = 1e-19
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Frame = +3
Query: 270 VKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP 449
+KP +++ + G P+ +Q CI + + G D + AK+G GKT F + +Q L
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 450 YGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKR-PHIVVA 623
+ + + T ELA+QI+ ++ + L ++V + GG ++ +LA PHIVV
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXR-LETIFSALPSKRQXLLFSAT 800
PGR+ ++ L K+KY VLDE D++ ++ R ++ I P ++Q ++FSAT
Sbjct: 168 TPGRML-ALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSAT 226
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 92.3 bits (219), Expect = 4e-19
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIFALVLTPTHELAY 497
P+P+Q I L G D + AK+G+GKT F++ +++L I +++TPT E++
Sbjct: 45 PSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISV 104
Query: 498 QIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK-RPHIVVAMPGRLADHISGCDTFSL 674
QI + + P R + GGS + L + RP IV+ PGR+A + ++
Sbjct: 105 QIKETVRKVA-PTGARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVK-LGAMNM 162
Query: 675 KKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ + VLDEAD+L E F + I ++LP RQ +FSAT
Sbjct: 163 SHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSAT 204
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 92.3 bits (219), Expect = 4e-19
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Frame = +3
Query: 318 PTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDPYGIFALVLTPTHELAY 497
P+P+Q I L G D + AK+G+GKT F++ +++L I +++TPT E++
Sbjct: 45 PSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISV 104
Query: 498 QIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAK-RPHIVVAMPGRLADHISGCDTFSL 674
QI + + P R + GGS + L + RP IV+ PGR+A + ++
Sbjct: 105 QIKETVRKVA-PTGARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVK-LGAMNM 162
Query: 675 KKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+ + VLDEAD+L E F + I ++LP RQ +FSAT
Sbjct: 163 SHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSAT 204
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 90.6 bits (215), Expect = 1e-18
Identities = 63/168 (37%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Frame = +3
Query: 321 TPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPI---IQHLAEDPYGIFALVLTPTHEL 491
T +Q + LL D + + TGSGKT AF LP+ IQ+ P I AL+L+P+ EL
Sbjct: 33 TDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSREL 92
Query: 492 AYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPH--IVVAMPGRLADHISGCDT 665
QI + L L V VTGG ++++++K+ K + I+VA PGRL I T
Sbjct: 93 CSQIVSVIQPFAEKLNLTVETVTGGQ-KVDKNIKMFKNKNVNILVATPGRLFQIIQHEKT 151
Query: 666 FSLKKIK---YLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+K++ LV+DEADR F + I S +P +R+ LFSAT
Sbjct: 152 LIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 85.4 bits (202), Expect = 5e-17
Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTG-DDCIGAAKTGSGKTFAFALPIIQHLAE----- 443
+++ + +G PT IQ + + D +GAA+TGSGKT AF +P++ L E
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 444 ------DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQI-EESLKLAK 602
+ G AL++ PT EL QI L +L + GG Q+ +E + +
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQ 285
Query: 603 RPHIVVAMPGRLADHISGCDTFSL----KKIKYLVLDEADRLFSESFXXRLETIFSAL-- 764
RP IVVA PGRL + +T K +K LV+DE DR+ E + L I + +
Sbjct: 286 RPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHE 345
Query: 765 ---PSKRQXLLFSAT 800
K Q L+FSAT
Sbjct: 346 ESEKEKLQTLVFSAT 360
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 84.2 bits (199), Expect = 1e-16
Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K FA + + K + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 429 QHLAED-------PYGIF--ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L +D G + ++LTPT ELA QI ++ + + V GG
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H T L K ++ VLDEADR+ + F +ETI
Sbjct: 461 NKGQIEKGATIIVGTVGRI-KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVN 519
Query: 753 FSALPSK--RQXLLFSAT 800
+ ++P K RQ L+FSAT
Sbjct: 520 YDSMPRKENRQTLMFSAT 537
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 84.2 bits (199), Expect = 1e-16
Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K FA + + K + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 429 QHLAED-------PYGIF--ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L +D G + ++LTPT ELA QI ++ + + V GG
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H T L K ++ VLDEADR+ + F +ETI
Sbjct: 461 NKGQIEKGATIIVGTVGRI-KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVN 519
Query: 753 FSALPSK--RQXLLFSAT 800
+ ++P K RQ L+FSAT
Sbjct: 520 YDSMPRKENRQTLMFSAT 537
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 84.2 bits (199), Expect = 1e-16
Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K FA + + K + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 429 QHLAED-------PYGIF--ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L +D G + ++LTPT ELA QI ++ + + V GG
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H T L K ++ VLDEADR+ + F +ETI
Sbjct: 461 NKGQIEKGATIIVGTVGRI-KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVN 519
Query: 753 FSALPSK--RQXLLFSAT 800
+ ++P K RQ L+FSAT
Sbjct: 520 YDSMPRKENRQTLMFSAT 537
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 83.8 bits (198), Expect = 1e-16
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Frame = +3
Query: 270 VKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP 449
+KP +++ + G P+ +Q CI + + G D + AK+G GKT F + +Q L
Sbjct: 47 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 106
Query: 450 YGIFALVLTPTHELAYQIADQFTILGQPLK-LRVCIVTGGSDQIEESLKLAKR-PHIVVA 623
+ + + T ELA+QI+ ++ + L ++V + GG ++ +LA PHIVV
Sbjct: 107 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 166
Query: 624 MPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
PGR+ ++ L K+KY VLDE D++ ++ R + +Q ++FSAT
Sbjct: 167 TPGRML-ALARSGKLKLDKVKYFVLDECDKMIGDADMRR------DVQEIKQVMMFSAT 218
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 82.6 bits (195), Expect = 3e-16
Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 22/183 (12%)
Frame = +3
Query: 318 PTPIQKGCISRLLTG-DDCIGAAKTGSGKTFAFALPIIQHLAE-----------DPYGIF 461
PT IQ + + D +GAA+TGSGKT AF +P++ L E + G
Sbjct: 11 PTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPR 70
Query: 462 ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQI-EESLKLAKRPHIVVAMPGRL 638
AL++ PT EL QI L +L + GG Q+ +E + +RP IVVA PGRL
Sbjct: 71 ALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRL 130
Query: 639 ADHISGCDTFSL----KKIKYLVLDEADRLFSESFXXRLETIFSAL-----PSKRQXLLF 791
+ +T K +K LV+DE DR+ E + L I + + K Q L+F
Sbjct: 131 WAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVF 190
Query: 792 SAT 800
SAT
Sbjct: 191 SAT 193
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 80.2 bits (189), Expect = 2e-15
Identities = 65/198 (32%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F+ + + + + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 298 KSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIM 357
Query: 429 QHLAEDP---YGI------FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L + YG ++LTPT ELA QI ++ + + V GG +
Sbjct: 358 SRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGY 417
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H L K +YLVLDEADR+ S F +E I
Sbjct: 418 NKSQIMKGCTIIVGTIGRV-KHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIIN 476
Query: 753 FSALP--SKRQXLLFSAT 800
+ +P KRQ ++FSAT
Sbjct: 477 YKNMPKNDKRQTMMFSAT 494
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 80.2 bits (189), Expect = 2e-15
Identities = 65/198 (32%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F+ + + + + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 298 KSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIM 357
Query: 429 QHLAEDP---YGI------FALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L + YG ++LTPT ELA QI ++ + + V GG +
Sbjct: 358 SRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGY 417
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H L K +YLVLDEADR+ S F +E I
Sbjct: 418 NKSQIMKGCTIIVGTIGRV-KHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIIN 476
Query: 753 FSALP--SKRQXLLFSAT 800
+ +P KRQ ++FSAT
Sbjct: 477 YKNMPKNDKRQTMMFSAT 494
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 79.4 bits (187), Expect = 3e-15
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F+ + + K + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 429 QHLAED-------PYGIF--ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L ++ G + ++LTPT EL QI ++ + + V GG
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H T L K ++ VLDEADR+ + F ++TI
Sbjct: 672 NKGQIEKGATIIVGTVGRI-KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVN 730
Query: 753 FSALPSK--RQXLLFSAT 800
+ ++P K RQ L+FSAT
Sbjct: 731 YESMPKKENRQTLMFSAT 748
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 79.4 bits (187), Expect = 3e-15
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F+ + + K + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 429 QHLAED-------PYGIF--ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L ++ G + ++LTPT EL QI ++ + + V GG
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H T L K ++ VLDEADR+ + F ++TI
Sbjct: 672 NKGQIEKGATIIVGTVGRI-KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVN 730
Query: 753 FSALPSK--RQXLLFSAT 800
+ ++P K RQ L+FSAT
Sbjct: 731 YESMPKKENRQTLMFSAT 748
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 79.4 bits (187), Expect = 3e-15
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
K F+ + + K + G TPIQ+ + + G D + A+TGSGKT AF LPI+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 429 QHLAED-------PYGIF--ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L ++ G + ++LTPT EL QI ++ + + V GG
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 582 ESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETI-- 752
++ K I+V GR+ H T L K ++ VLDEADR+ + F ++TI
Sbjct: 672 NKGQIEKGATIIVGTVGRI-KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVN 730
Query: 753 FSALPSK--RQXLLFSAT 800
+ ++P K RQ L+FSAT
Sbjct: 731 YESMPKKENRQTLMFSAT 748
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 76.2 bits (179), Expect = 3e-14
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQH 434
F+ + P L+ +L IR P+PIQ I + + + +A TGSGKT AFALP+I
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 435 LAE----------DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEE 584
+ E + + A+VL PT ELA Q +F + +G I+
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISAANFSGEETDIQH 247
Query: 585 SLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF------SESFXXRLE 746
+ I+V+ P R+ H+ DT SL ++LV+DE+DRLF + F +L
Sbjct: 248 A-------DILVSTPNRIVFHLDKIDTSSL---RWLVVDESDRLFEVVEGQDKCFRNQLA 297
Query: 747 TIFSALPSK-RQXLLFSAT 800
I+ A +K + FSAT
Sbjct: 298 AIYKACDAKCTRVAFFSAT 316
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 76.2 bits (179), Expect = 3e-14
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Frame = +3
Query: 294 LLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE---------- 443
L + + PTPIQ+ ++ G+D + A TGSGKT AF +P + L E
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 444 DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE--ESLKLAKRPHIV 617
+ L++ PT EL Q L L+ + GG + + L+ + +I+
Sbjct: 811 EKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNIL 870
Query: 618 VAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETIFSALPSKR--QXLL 788
VA GRL D ++ + SL K+KY+VLDEADR+ S F + I + P +R Q +L
Sbjct: 871 VATMGRLQDFVNAGEV-SLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS-PGERTQQTVL 928
Query: 789 FSAT 800
FSA+
Sbjct: 929 FSAS 932
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 76.2 bits (179), Expect = 3e-14
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Frame = +3
Query: 294 LLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE---------- 443
L + + PTPIQ+ ++ G+D + A TGSGKT AF +P + L E
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 444 DPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE--ESLKLAKRPHIV 617
+ L++ PT EL Q L L+ + GG + + L+ + +I+
Sbjct: 811 EKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNIL 870
Query: 618 VAMPGRLADHISGCDTFSLKKIKYLVLDEADRLF-SESFXXRLETIFSALPSKR--QXLL 788
VA GRL D ++ + SL K+KY+VLDEADR+ S F + I + P +R Q +L
Sbjct: 871 VATMGRLQDFVNAGEV-SLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS-PGERTQQTVL 928
Query: 789 FSAT 800
FSA+
Sbjct: 929 FSAS 932
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 74.9 bits (176), Expect = 7e-14
Identities = 50/177 (28%), Positives = 88/177 (49%)
Frame = +3
Query: 270 VKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAEDP 449
+K L++ + G P+ IQK ++ TG D ++ GSGKT + I+Q + +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 450 YGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMP 629
+ ++L P +A + +Q LG+ L + + G D E+ K++ H+++ P
Sbjct: 63 AHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATCL--GFDTTAENDKIS---HVLMGTP 117
Query: 630 GRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSAT 800
+I DT +IK VLDEAD + S+ F ++ +F ++P Q +L SAT
Sbjct: 118 KDFLSNIPS-DT---SRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSAT 170
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 73.7 bits (173), Expect = 2e-13
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Frame = +3
Query: 267 GVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHL--- 437
G+ P +++ L + IQ I ++L G D +G A+T +GKT AF LPII +
Sbjct: 387 GLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRM 446
Query: 438 -------AEDPYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKL 596
A G AL+L PT ELA QI + Q + V + G SD+ ++
Sbjct: 447 DEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEI 506
Query: 597 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
I++ GR+ D + SL +++LV DEADRL +
Sbjct: 507 RNGCDILIGTCGRIMD-FTVKSHISLLHLRFLVFDEADRLLQD 548
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 72.1 bits (169), Expect = 5e-13
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTG--DDCIGAAKTGSGKTFAFALPII 428
F L +KP ++K L T+ + PT IQ+ + LL + I A++G+GKT AF L ++
Sbjct: 211 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 270
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQ---PLKLRVCIVTGGSDQIEESLKLA 599
+ + + L PT ELA QI + +G+ LK+ I GG+ KL
Sbjct: 271 CRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI-KGGNMAAMRGRKLT 329
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEAD-RLFSESFXXRLETIFSALPSKR 776
++ IV+ PG D++ KI+ LVLDEAD ++ + F TI++ +
Sbjct: 330 EQ--IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDAS 387
Query: 777 ---QXLLFSATXHLMCVN 821
Q +LFSAT +N
Sbjct: 388 DSVQSMLFSATYDEPVIN 405
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 72.1 bits (169), Expect = 5e-13
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTG--DDCIGAAKTGSGKTFAFALPII 428
F L +KP ++K L T+ + PT IQ+ + LL + I A++G+GKT AF L ++
Sbjct: 236 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 295
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQ---PLKLRVCIVTGGSDQIEESLKLA 599
+ + + L PT ELA QI + +G+ LK+ I GG+ KL
Sbjct: 296 CRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI-KGGNMAAMRGRKLT 354
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEAD-RLFSESFXXRLETIFSALPSKR 776
++ IV+ PG D++ KI+ LVLDEAD ++ + F TI++ +
Sbjct: 355 EQ--IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDAS 412
Query: 777 ---QXLLFSATXHLMCVN 821
Q +LFSAT +N
Sbjct: 413 DSVQSMLFSATYDEPVIN 430
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 72.1 bits (169), Expect = 5e-13
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTG--DDCIGAAKTGSGKTFAFALPII 428
F L +KP ++K L T+ + PT IQ+ + LL + I A++G+GKT AF L ++
Sbjct: 620 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 679
Query: 429 QHLAEDPYGIFALVLTPTHELAYQIADQFTILGQ---PLKLRVCIVTGGSDQIEESLKLA 599
+ + + L PT ELA QI + +G+ LK+ I GG+ KL
Sbjct: 680 CRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI-KGGNMAAMRGRKLT 738
Query: 600 KRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEAD-RLFSESFXXRLETIFSALPSKR 776
++ IV+ PG D++ KI+ LVLDEAD ++ + F TI++ +
Sbjct: 739 EQ--IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDAS 796
Query: 777 ---QXLLFSATXHLMCVN 821
Q +LFSAT +N
Sbjct: 797 DSVQSMLFSATYDEPVIN 814
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 71.3 bits (167), Expect = 8e-13
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Frame = +3
Query: 378 AAKTGSGKTFAFALPIIQHLAEDPYGIF-ALVLTPTHELAYQIADQFTILGQPLKL-RVC 551
AA TGSGKT + LP++ + P I A++L P L QI D+F + +V
Sbjct: 162 AAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESGVAKVV 221
Query: 552 IVTGGSDQIEESLKLAK-RPHIVVAMPGRLADHISG--CDTFSLKKIKYLVLDEADRL 716
++G +D +E+ +LA P+++VA P RL H++ L K+++L++DEADR+
Sbjct: 222 SLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLSKLRFLIVDEADRM 279
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 60.1 bits (139), Expect = 2e-09
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +3
Query: 429 QHLAED-PYGIFALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKR 605
+H D G A+++ PT EL QI F L Q L I ++ E S+ L R
Sbjct: 87 EHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDR 146
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXL 785
H+VV PG+L S + + YLV+DEAD L S + + I S LP Q L
Sbjct: 147 SHVVVTTPGKLLRMCSLRPEY-CTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCL 205
Query: 786 LFSAT 800
+ SAT
Sbjct: 206 MTSAT 210
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +3
Query: 255 FAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ 431
F G+ P L L +L PT +Q I +L G D + AA+TGSGKT AF+LPI Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>AC024806-5|AAF59526.1| 208|Caenorhabditis elegans Hypothetical
protein Y52E8A.1 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 264 LGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDD 368
LGV W+ +QL T+ I+T TP+Q CI ++L G +
Sbjct: 85 LGVCSWINQQLETMQIKTATPVQAACIPKILEGSE 119
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.82
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 17/190 (8%)
Frame = +3
Query: 282 LIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQ-HLAEDPYGI 458
++ L + + T +Q+ I + G + A TG GKT+AF +P I+ L
Sbjct: 104 IVNNLKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNC 163
Query: 459 F--------ALVLTPTHELAYQIADQF-TILGQPLKLRVCIVTG-GSDQIEESLKLAK-R 605
F L++ T L Q+ ++ ILG V + D++ + K +
Sbjct: 164 FEYTKPSPSILIMASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQ 223
Query: 606 PHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE-SFXXRLETIFSALPSKR-- 776
I G+L I C L +K ++LDEAD++ +F + I L +
Sbjct: 224 CDIAFCTIGKLKATIE-CGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLE 282
Query: 777 --QXLLFSAT 800
Q FSAT
Sbjct: 283 NLQSCFFSAT 292
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 31.1 bits (67), Expect = 1.1
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Frame = +3
Query: 339 CISRLLTGDDCIGAAKTGSGKTFAFALPIIQ----HLAED---PYGIFALV-LTPTHELA 494
C S L + + + A TG+GKT L ++Q HLAED F +V + PT L
Sbjct: 285 CDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEEFKIVYIAPTKSLV 344
Query: 495 YQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHIS--GCDTF 668
++ F+ P + V +TG Q+ + +A + ++V P + D ++ G +
Sbjct: 345 QEMVGSFSKRLAPFGITVGEMTG---QMNKEQFMATQ--VIVCTPEKY-DVVTRKGGERA 398
Query: 669 SLKKIKYLVLDEADRLFSESFXXRLETIFSALPSKRQXLLFSATXHLMCVNRNYXP 836
+ ++ L++DE L + LE+I L R+ T HL + +Y P
Sbjct: 399 YNQMVRLLIIDEI-HLLHDDRGPVLESIVQ-LFRIRKMWRHVKTEHLHFFDNSYRP 452
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 30.7 bits (66), Expect = 1.4
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Frame = +3
Query: 339 CISRLLTGDDCIGAAKTGSGKTFAFALPIIQ----HLAED---PYGIFALV-LTPTHELA 494
C S L + + + A TG+GKT L ++Q HLAED F +V + P L
Sbjct: 483 CDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKSLV 542
Query: 495 YQIADQFTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHIS--GCDTF 668
++ F+ P + V +TG + +E + ++V P + D ++ G +
Sbjct: 543 QEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQ---VIVCTPEKY-DVVTRKGGERA 598
Query: 669 SLKKIKYLVLDEADRLFSE 725
+ ++ L++DE L +
Sbjct: 599 YNQMVRLLIIDEIHLLHDD 617
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 324 PIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
P+Q+ I+ +++ +D + TG GK+ + LP +
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 324 PIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
P+Q+ I+ +++ +D + TG GK+ + LP +
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
>AF068713-11|AAC17792.1| 315|Caenorhabditis elegans Serpentine
receptor, class i protein21 protein.
Length = 315
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 411 MQMSFLTPFWQLQCSHHQSIIAIY-NLFGLELV 316
+ +SF TP W + C H +II+++ N G+ L+
Sbjct: 3 LNISFETPKWLVTCYHSSTIISVFINTLGIYLI 35
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 2.5
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 17/175 (9%)
Frame = +3
Query: 327 IQKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAED-PYGIF--------ALVLTP 479
+Q+ I + G + A TG GKT+AF +P I+ E+ F L++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 480 THELAYQIADQF-TILGQPLKLRVCIVTG-GSDQIEESLKLAK-RPHIVVAMPGRLADHI 650
T L Q+ ++ ILG V + D++ + K + I G+L I
Sbjct: 79 TSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLKATI 138
Query: 651 SGCDTFSLKKIKYLVLDEADRLFSE-SFXXRLETIFSALPSKR----QXLLFSAT 800
C L +K ++LDEAD++ +F + I L + Q FSAT
Sbjct: 139 E-CGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLENLQSCFFSAT 192
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 330 QKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
QK CI L G D TG+GK+ + LP +
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV 284
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 330 QKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
QK CI L G D TG+GK+ + LP +
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV 284
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = +3
Query: 330 QKGCIS--RLLTGDDCIGAAKTGSGKT 404
Q+ C+S RLL G++CI + TG+GKT
Sbjct: 172 QQECLSDKRLLDGENCILSLPTGAGKT 198
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 576 IEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSE 725
+E+S + A H +V + G +++ T+SLKK+K LV D + +++
Sbjct: 1468 VEKSKRTANAQHRIVVLQG-MSNTFHNAITWSLKKVKKLVGDAEAKAYAD 1516
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 330 QKGCISRLLTGDDCIGAAKTGSGKTFAFALPIIQHLAE 443
Q+ + L G +C+ A TGSGKT ++H+ E
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHIEE 412
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 29.1 bits (62), Expect = 4.4
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Frame = +3
Query: 381 AKTGSGKTFAFALPIIQ-HLAEDPY--------GIFALVLTPTHELAYQIADQFTILGQP 533
A TG GKT+AF +P I+ L E P L+L T+ L Q+ ++ +L
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNRCEVLLGL 195
Query: 534 LKLR--VCIVTGGSDQIEESLKLAK-RPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDE 704
+ + + I +++ S + K + I G+L I T L +K ++LDE
Sbjct: 196 IDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKASIED-KTILLDNLKMMILDE 254
Query: 705 ADRL 716
+D++
Sbjct: 255 SDKM 258
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 555 VTGGSDQIEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFS 722
V+ G + E ++ +R + V AMPGR+ + + C T + +LDE D+L+S
Sbjct: 360 VSLGGIRDESDIRGHRRTY-VAAMPGRIIEALKTCKTNN----PVFLLDEVDKLYS 410
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,704,640
Number of Sequences: 27780
Number of extensions: 372688
Number of successful extensions: 1101
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -