Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C09
(879 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 102 5e-24
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 4.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 4.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 4.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 4.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 6.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 6.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 6.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 6.5
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 8.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 8.6
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 8.6
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 102 bits (244), Expect = 5e-24
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 14/198 (7%)
Frame = +3
Query: 249 KEFAVLGVKPWLIKQLLTLGIRTPTPIQKGCISRLLTGDDCIGAAKTGSGKTFAFALPII 428
+ F G++ ++ + G + PTP+QK + ++ G D + A+TGSGKT AFA+PII
Sbjct: 196 ESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPII 255
Query: 429 QHLAEDPYGIF---------ALVLTPTHELAYQIADQFTILGQPLKLRVCIVTGGSDQIE 581
L E + ++++PT EL QI Q L+ + GG+ +
Sbjct: 256 NTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVVAYGGTSVMH 315
Query: 582 ESLKLAKRPHIVVAMPGRLADHI-SGCDTFSLKKIKYLVLDEADRLFSESFXXRLETIF- 755
+ KL+ HI+VA PGRL D + G FS +++LVLDEADR+ F +E +
Sbjct: 316 QRGKLSAGCHILVATPGRLLDFVEKGRVKFS--SVQFLVLDEADRMLDMGFLPSIEKMVD 373
Query: 756 --SALP-SKRQXLLFSAT 800
+ +P +RQ L+FSAT
Sbjct: 374 HETMVPLGERQTLMFSAT 391
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 217 YNNQSFNLNNYQSA*QNDY 161
YNN N NNY + N+Y
Sbjct: 330 YNNNYNNYNNYNNNYNNNY 348
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 217 YNNQSFNLNNYQSA*QNDYLN 155
YNN + N NNY + N+Y N
Sbjct: 327 YNNYNNNYNNYNNY-NNNYNN 346
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 217 YNNQSFNLNNYQSA*QND 164
YNN ++N NNY + N+
Sbjct: 333 YNNNNYNNNNYNNNYNNN 350
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 217 YNNQSFNLNNYQ 182
YNN ++N NNY+
Sbjct: 97 YNNNNYNNNNYK 108
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 217 YNNQSFNLNNYQ 182
YNN ++N NNY+
Sbjct: 97 YNNNNYNNNNYK 108
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 217 YNNQSFNLNNYQ 182
YNN ++N NNY+
Sbjct: 97 YNNNNYNNNNYK 108
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 217 YNNQSFNLNNYQ 182
YNN ++N NNY+
Sbjct: 97 YNNNNYNNNNYK 108
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 217 YNNQSFNLNNY 185
YNN ++N NNY
Sbjct: 98 YNNNNYNNNNY 108
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 217 YNNQSFNLNNY 185
YNN ++N NNY
Sbjct: 98 YNNNNYNNNNY 108
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 217 YNNQSFNLNNYQSA*QNDY 161
YNN ++N NY + N+Y
Sbjct: 96 YNNNNYNNYNYNNNNYNNY 114
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 6.5
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 513 FTILGQPLKLRVCIVTGGSDQIEESLKLAKRPHIVVAMPGRLADHISG---CDTFSLKKI 683
FT L Q L L + GSD+++E+ L IV+ + + HI D F L +I
Sbjct: 305 FTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFL-QI 363
Query: 684 KYLVLDEADRLFSESF 731
L + DR+ S +F
Sbjct: 364 LDLRNNSIDRIESNAF 379
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 6.5
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -3
Query: 418 RANANVFPDP---VLAAP-MQSSPVNNRDIQPFWIGVGVLIPNVSNCLISHG 275
R N PDP P + S P+NN D P +GV +VS+ + +G
Sbjct: 177 RRNERRTPDPHDETAKKPRVLSPPLNNNDATPTDFSMGVKNNHVSSKVEGNG 228
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 214 NNQSFNLNNYQSA*QNDY 161
NN ++N NNY+ N+Y
Sbjct: 87 NNYNYNNNNYKKLYCNNY 104
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 214 NNQSFNLNNYQSA*QNDY 161
NN ++N NNY+ N+Y
Sbjct: 87 NNYNYNNNNYKKLYCNNY 104
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 214 NNQSFNLNNYQSA*QNDY 161
NN ++N NNY+ N+Y
Sbjct: 87 NNYNYNNNNYKKLYCNNY 104
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 217 YNNQSFNLNNYQSA*QNDYLN 155
+NN ++N NNY + N+Y N
Sbjct: 324 HNNNNYNNNNYNNN-YNNYNN 343
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 482 CWSKNQCKNSIRILC 438
CWS++ + +RILC
Sbjct: 392 CWSRDFRRAFVRILC 406
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,874
Number of Sequences: 438
Number of extensions: 4669
Number of successful extensions: 27
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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