Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C03
(881 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7C2D Cluster: PREDICTED: similar to retinoblas... 146 7e-34
UniRef50_A7RQ05 Cluster: Predicted protein; n=1; Nematostella ve... 146 7e-34
UniRef50_P28749 Cluster: Retinoblastoma-like protein 1; n=25; Eu... 134 3e-30
UniRef50_UPI0000E49F99 Cluster: PREDICTED: similar to retinoblas... 131 2e-29
UniRef50_Q17Q73 Cluster: P130; n=1; Aedes aegypti|Rep: P130 - Ae... 121 3e-26
UniRef50_UPI0000D56895 Cluster: PREDICTED: similar to Retinoblas... 120 5e-26
UniRef50_UPI000065F7DF Cluster: Retinoblastoma-like protein 1 (1... 120 5e-26
UniRef50_Q08999 Cluster: Retinoblastoma-like protein 2; n=40; Eu... 120 6e-26
UniRef50_Q4TJC5 Cluster: Chromosome undetermined SCAF205, whole ... 106 9e-22
UniRef50_Q24472 Cluster: Retinoblastoma family protein; n=2; Sop... 102 1e-20
UniRef50_Q7Q5E8 Cluster: ENSANGP00000004305; n=1; Anopheles gamb... 83 1e-14
UniRef50_Q6NRA7 Cluster: MGC84607 protein; n=2; Xenopus|Rep: MGC... 69 1e-10
UniRef50_UPI00006A006A Cluster: Retinoblastoma-like protein 2 (1... 66 1e-09
UniRef50_UPI00015A44FD Cluster: Retinoblastoma-like protein 2 (1... 54 5e-06
UniRef50_UPI0000E4A91F Cluster: PREDICTED: similar to p107; n=2;... 46 0.001
UniRef50_Q9VF04 Cluster: CG5083-PA; n=2; Drosophila melanogaster... 41 0.036
UniRef50_P77338 Cluster: Potassium efflux system kefA precursor;... 33 7.3
>UniRef50_UPI0000DB7C2D Cluster: PREDICTED: similar to
retinoblastoma-like protein 1 isoform a; n=2;
Apocrita|Rep: PREDICTED: similar to retinoblastoma-like
protein 1 isoform a - Apis mellifera
Length = 1006
Score = 146 bits (354), Expect = 7e-34
Identities = 70/134 (52%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Frame = +3
Query: 162 MPKSDENED-WIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVA 338
M +SD+ ED + +DLC LN+ + I++NY L+GD+LHW+ CALYVA
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 339 CRTSVTPTV-QTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISR 515
CR S PTV +TG VEGNCVSLT+LL+LCNL LIQFF K K+W +MA+M DF+ +I +
Sbjct: 61 CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRSKIEK 120
Query: 516 LEHKFAVSSVLFRE 557
LE FAVS V+F++
Sbjct: 121 LEGNFAVSMVIFKK 134
Score = 59.7 bits (138), Expect = 1e-07
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCER-RIHNSANDLV 732
K+QPIF ++F ++ + RR K PC T A + + +C + + ++DLV
Sbjct: 134 KYQPIFTDIFKDPVDDISRPPRSRRHKAMPC-TPARVFEFCWTLFICIKGAFPDISDDLV 192
Query: 733 DMYHILLSCLDYIFANAFMARRVDIINP 816
+ YH+LL C D I++NA +A R D++NP
Sbjct: 193 NSYHLLLVCCDLIYSNALLANRKDLLNP 220
>UniRef50_A7RQ05 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1083
Score = 146 bits (354), Expect = 7e-34
Identities = 67/134 (50%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Frame = +3
Query: 162 MPKSDENEDWI--EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYV 335
M S+E+ED I E+ +++CS LN+ + I+ NY L+GD LHW+ACALYV
Sbjct: 1 MASSNEDEDTITKERFDNVCSELNMDEETAESAWSSYETIRTNYTLEGDSLHWLACALYV 60
Query: 336 ACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISR 515
ACR SV PTV + VEGNCVSLT+LLR LSLIQFF K+K W++M++ S++F+++I
Sbjct: 61 ACRRSVVPTVDSSGTVEGNCVSLTRLLRASKLSLIQFFSKMKKWLDMSNASSEFRKKIEH 120
Query: 516 LEHKFAVSSVLFRE 557
LE F VS+V+F +
Sbjct: 121 LERNFQVSTVIFNK 134
Score = 59.7 bits (138), Expect = 1e-07
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF++LF + + K R+ + QPCS + + + ++DLV+
Sbjct: 134 KYRPIFLDLFKNPSEDTPKAQRSRKSRKQPCSISDVFSFCWTLYVEAKGNFPAISDDLVN 193
Query: 736 MYHILLSCLDYIFANAFMAR-RVDIINPELK 825
YH+LL CLD +++NA AR R D+IN E +
Sbjct: 194 SYHLLLCCLDLMYSNALAARHRRDLINTEFE 224
>UniRef50_P28749 Cluster: Retinoblastoma-like protein 1; n=25;
Euteleostomi|Rep: Retinoblastoma-like protein 1 - Homo
sapiens (Human)
Length = 1068
Score = 134 bits (324), Expect = 3e-30
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>UniRef50_UPI0000E49F99 Cluster: PREDICTED: similar to
retinoblastoma-related protein p130; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
retinoblastoma-related protein p130 - Strongylocentrotus
purpuratus
Length = 208
Score = 131 bits (317), Expect = 2e-29
Identities = 63/139 (45%), Positives = 92/139 (66%), Gaps = 4/139 (2%)
Frame = +3
Query: 171 SDENEDWI----EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVA 338
SD +E+ + ++ E+LC +LN+ + I NY L+GD++ W+ACALYVA
Sbjct: 2 SDSSEEIVLTTKDRFEELCMSLNLDDATKKTAWESYERICLNYTLEGDDIQWLACALYVA 61
Query: 339 CRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRL 518
CR SV PTV G +VEGN VSLT+LLR LS+IQFF K+K W +MA++ F++++ RL
Sbjct: 62 CRRSVVPTVSNG-IVEGNGVSLTQLLRSAKLSVIQFFNKMKKWSDMANLPQQFRDKVDRL 120
Query: 519 EHKFAVSSVLFREVPTDFH 575
E FAVS+V+F++ F+
Sbjct: 121 ERNFAVSTVIFKKYQPIFY 139
>UniRef50_Q17Q73 Cluster: P130; n=1; Aedes aegypti|Rep: P130 - Aedes
aegypti (Yellowfever mosquito)
Length = 748
Score = 121 bits (291), Expect = 3e-26
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
Frame = +3
Query: 162 MPKSDENEDWIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVAC 341
M E E + D+C LN+ F + ++ Y LD D+LHW+ C+L++ C
Sbjct: 1 MTNMSEGEKLRTEHRDICGQLNIDAATEEQSWNSFQDTQKTYNLDVDQLHWLCCSLFITC 60
Query: 342 RTSVTPTV-QTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRL 518
R VTPTV T V+ GNCVS+T+LLRLC ++L +FF KI WMEM S D + IS L
Sbjct: 61 RKKVTPTVGNTNSVLHGNCVSMTRLLRLCKINLNEFFKKINQWMEMTSQPEDCRNAISSL 120
Query: 519 EHKFAVSSVLFRE 557
+H F V+ ++++
Sbjct: 121 QHNFIVTMSIYQK 133
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSAN-DLV 732
K++ +F +FV E ++ K +P QPC++ L + + +C + + N DLV
Sbjct: 133 KYRDMFPSMFVAPCEEEQRRGKKSKP--QPCTSGQLN-KFCWKLFICAKSEYPDQNGDLV 189
Query: 733 DMYHILLSCLDYIFANAFMARRVDIINP 816
Y++LL CLD ++AN R D++NP
Sbjct: 190 KSYNMLLCCLDLVYANVIAEGRTDLVNP 217
>UniRef50_UPI0000D56895 Cluster: PREDICTED: similar to
Retinoblastoma-like protein 1 (107 kDa
retinoblastoma-associated protein) (PRB1) (P107); n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
Retinoblastoma-like protein 1 (107 kDa
retinoblastoma-associated protein) (PRB1) (P107) -
Tribolium castaneum
Length = 940
Score = 120 bits (289), Expect = 5e-26
Identities = 58/132 (43%), Positives = 80/132 (60%)
Frame = +3
Query: 162 MPKSDENEDWIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVAC 341
M S E E+ EK +LC+ L++ F I +N+ L+G+ LHW+ CA+YV+C
Sbjct: 1 MVLSSETEELEEKHSELCNKLHLSQQISRDAWERFETINKNFTLEGEPLHWIGCAIYVSC 60
Query: 342 RTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLE 521
S+ T V NCV+LT LLR CNLS+ QFF KIK W +MASM +FK+RI LE
Sbjct: 61 WKSIAATAAQNSV-HTNCVNLTNLLRHCNLSIAQFFYKIKQWSDMASMPEEFKKRIEYLE 119
Query: 522 HKFAVSSVLFRE 557
F+V+ +F+E
Sbjct: 120 GSFSVAYNVFKE 131
Score = 38.7 bits (86), Expect = 0.19
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQV--SKRRP-KLQPCSTNALX*V---YMVFVHLCERRIHNS 717
++QP+FM++F ++ SK R K +P ++ L + +F+ + + N
Sbjct: 131 EYQPLFMQIFKAPKAPEAHELDTSKHRNRKNKPVPSSPLKVFEFCWTLFITI-KSEDTNY 189
Query: 718 ANDLVDMYHILLSCLDYIFANAFMARRVDIINPE 819
NDLV H+L++ D+ F +A A R D++NP+
Sbjct: 190 NNDLVTSCHLLIAICDWAFKHALQADRKDLLNPD 223
>UniRef50_UPI000065F7DF Cluster: Retinoblastoma-like protein 1 (107
kDa retinoblastoma-associated protein) (PRB1) (P107).;
n=1; Takifugu rubripes|Rep: Retinoblastoma-like protein
1 (107 kDa retinoblastoma-associated protein) (PRB1)
(P107). - Takifugu rubripes
Length = 1057
Score = 120 bits (289), Expect = 5e-26
Identities = 55/119 (46%), Positives = 79/119 (66%)
Frame = +3
Query: 201 MEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTGKV 380
+E LC LN+ F+ I + L+GD +HW+AC+LY ACR TPTV G +
Sbjct: 1 LEKLCQELNMDEQTATEAMQNFTAIWATHTLEGDVVHWLACSLYAACRKGSTPTVGKG-L 59
Query: 381 VEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFRE 557
+EGNCVSLT++LR LSLIQFF K++ W +M+++S +F+ R+ +LE F VS V+FR+
Sbjct: 60 MEGNCVSLTRILRTSKLSLIQFFSKMRKWADMSNLSQNFRLRLKQLERNFEVSMVIFRK 118
Score = 39.9 bits (89), Expect = 0.084
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 721 NDLVDMYHILLSCLDYIFANAFM-ARRVDIINPELK 825
+DLV+ YH+LL CLD +F NA + + R ++IN K
Sbjct: 191 DDLVNSYHLLLCCLDLVFGNALLCSNRKELINSSFK 226
>UniRef50_Q08999 Cluster: Retinoblastoma-like protein 2; n=40;
Euteleostomi|Rep: Retinoblastoma-like protein 2 - Homo
sapiens (Human)
Length = 1139
Score = 120 bits (288), Expect = 6e-26
Identities = 56/121 (46%), Positives = 81/121 (66%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
++ ++LCS LN+ + + +Y L+G++LHW+ACALYVACR SV PTV G
Sbjct: 47 QRFDELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRKSV-PTVSKG 105
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
VEGN VSLT++L+ SLI+FF K+K W +MA++ F+ER RLE F VS+V+F+
Sbjct: 106 -TVEGNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFK 164
Query: 555 E 557
+
Sbjct: 165 K 165
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF ++F E +Q R+ + QPC+ + + V + ++DLV+
Sbjct: 165 KYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVN 224
Query: 736 MYHILLSCLDYIFANAFM-ARRVDIINPELKDYXQ-XX*NDSKCQNSSMC 879
YH+LL LD ++ NA + R +++NP K + DSK + C
Sbjct: 225 SYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPC 274
>UniRef50_Q4TJC5 Cluster: Chromosome undetermined SCAF205, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF205, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 178
Score = 106 bits (254), Expect = 9e-22
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = +3
Query: 297 GDELHWMACALYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEM 476
G ELHW+ACALYVACR+SV PTV G EGN VSLT++LR +SLI+FF K+K W +M
Sbjct: 2 GSELHWLACALYVACRSSV-PTVGKG-TSEGNYVSLTRILRCSEMSLIEFFNKMKKWQDM 59
Query: 477 ASMSTDFKERISRLEHKFAVSSVLFRE 557
AS+ DF+E ++LE F VS+V+F++
Sbjct: 60 ASLPQDFRESTNKLERNFTVSAVIFKK 86
Score = 55.6 bits (128), Expect = 2e-06
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCS-TNALX*VYMVFVHLCERRIHNSANDLV 732
K+ PIF +F + EP + R+ + PC+ + +++FVH + ++DLV
Sbjct: 86 KYVPIFKTIFKAPSEEPPRVHRSRKQRRHPCTISEVFNFCWVLFVH-AKGNFPMISDDLV 144
Query: 733 DMYHILLSCLDYIFANAFMAR-RVDIINPELK 825
+ YH+LL LD +F NA + R +++NP K
Sbjct: 145 NSYHLLLCALDLVFTNALLCNARKELLNPNFK 176
>UniRef50_Q24472 Cluster: Retinoblastoma family protein; n=2;
Sophophora|Rep: Retinoblastoma family protein -
Drosophila melanogaster (Fruit fly)
Length = 845
Score = 102 bits (245), Expect = 1e-20
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 147 INSIIMPKSDENEDWIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACA 326
++ ++ D E + +LC +LN+ + E+ + ++G HWM CA
Sbjct: 14 VSGLVATSDDRLEMINAEYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCA 73
Query: 327 LYVACRTSVTPTVQTGK--VVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFK 500
+Y ACR + TPTV TG+ VV+GNCVSL LLR C +S+ +F KIK W +MA++ +F
Sbjct: 74 IYTACRRTSTPTV-TGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFV 132
Query: 501 ERISRLEHKFAVSSVLFR 554
I L+ KF+++ +L +
Sbjct: 133 NEIEDLDRKFSITFMLHK 150
Score = 37.9 bits (84), Expect = 0.34
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 724 DLVDMYHILLSCLDYIFANAFMARRVDIINPELK 825
DLV Y++++ C+D I+ N +R D+INP+ +
Sbjct: 210 DLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFE 243
>UniRef50_Q7Q5E8 Cluster: ENSANGP00000004305; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000004305 - Anopheles gambiae
str. PEST
Length = 690
Score = 82.6 bits (195), Expect = 1e-14
Identities = 37/121 (30%), Positives = 59/121 (48%)
Frame = +3
Query: 210 LCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTGKVVEG 389
+C LN+ F + + L G+ HWM CALYVAC + ++G
Sbjct: 1 ICRALNIDADTENRSWSSFERTRDQFDLTGEPTHWMCCALYVACLQELPAVGDPDHYIQG 60
Query: 390 NCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFREVPTD 569
N V++T LL C++ + +FF K+K W E+ S+ + + L H+F+VS + D
Sbjct: 61 NGVNITNLLTQCDIKIQEFFSKMKQWSEIRSLPGRLRTAVDNLHHEFSVSITTYTVFGED 120
Query: 570 F 572
F
Sbjct: 121 F 121
Score = 33.1 bits (72), Expect = 9.6
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +1
Query: 568 IFMELFVGLTNE----PVKQVSKRRPKLQPCSTNALX*V-YMVFVHLCERRIHNSANDLV 732
+F E F + NE P + ++ K PCS N L +++F+ + E+ DL
Sbjct: 116 VFGEDFPRIFNEANIVPDEPKRNKKSKPNPCSYNRLREFSWLLFLTVKEQH-REQRRDLA 174
Query: 733 DMYHILLSCLDYIFANAFMARRVDIINPEL 822
+ + +D I+ N R+D++NP++
Sbjct: 175 TAMDLCVCVMDLIYRNVVADGRMDLVNPKV 204
>UniRef50_Q6NRA7 Cluster: MGC84607 protein; n=2; Xenopus|Rep:
MGC84607 protein - Xenopus laevis (African clawed frog)
Length = 998
Score = 69.3 bits (162), Expect = 1e-10
Identities = 29/57 (50%), Positives = 45/57 (78%)
Frame = +3
Query: 387 GNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFRE 557
GN VSLT++LR LSLIQFF K+K W++M+++ +F+ER+ RLE F V++V+F++
Sbjct: 37 GNGVSLTRILRSAKLSLIQFFNKMKKWIDMSNLPQEFRERVERLERNFEVATVIFKK 93
Score = 41.5 bits (93), Expect = 0.027
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQ-----PCSTNALX*VYMVFVHLCERRIHNSA 720
KF+PIF E+F +E + R+ + CS L +
Sbjct: 93 KFEPIFREIFQNPHDEQPRLPRSRKQSILFCRRLQCSVKDLFSFCWTLFVYSKGNFCLIG 152
Query: 721 NDLVDMYHILLSCLDYIFANAFMA-RRVDIINP 816
+DLV+ YH+LL CLD I+A+ + D++NP
Sbjct: 153 DDLVNSYHLLLCCLDLIYAHVLQCPNKEDLLNP 185
>UniRef50_UPI00006A006A Cluster: Retinoblastoma-like protein 2 (130
kDa retinoblastoma-associated protein) (PRB2) (P130)
(RBR-2).; n=1; Xenopus tropicalis|Rep:
Retinoblastoma-like protein 2 (130 kDa
retinoblastoma-associated protein) (PRB2) (P130)
(RBR-2). - Xenopus tropicalis
Length = 990
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +3
Query: 387 GNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFRE 557
GN VSLT++L LSLI+FF KIK W +MA++ T+F+ R +LE F VS+VLF++
Sbjct: 1 GNYVSLTQILSSSELSLIEFFNKIKKWEDMANLPTEFRTRTKKLERNFTVSAVLFKK 57
Score = 50.4 bits (115), Expect = 6e-05
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKL------QPCSTNALX*V-YMVFVHLCERRIHN 714
K+ PIF E+F E +Q R+ L QPC+ + + +++F+H +
Sbjct: 57 KYDPIFQEVFRSPLEEQPRQHRGRKQSLYLLFRRQPCTVSEVYQFCWVLFIHT-KGNFPM 115
Query: 715 SANDLVDMYHILLSCLDYIFANAFMA-RRVDIINPELKDY 831
++DLV+ YH+LL LD ++ NA R +++NP +D+
Sbjct: 116 ISDDLVNSYHLLLCALDLVYGNALQCPNRRELLNPNFQDF 155
>UniRef50_UPI00015A44FD Cluster: Retinoblastoma-like protein 2 (130
kDa retinoblastoma-associated protein) (PRB2) (P130)
(RBR-2).; n=4; Danio rerio|Rep: Retinoblastoma-like
protein 2 (130 kDa retinoblastoma-associated protein)
(PRB2) (P130) (RBR-2). - Danio rerio
Length = 994
Score = 54.0 bits (124), Expect = 5e-06
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCS-TNALX*VYMVFVHLCERRIHNSANDLV 732
K+ P+F ++F T+E + R+ + PC+ T +++F+H + ++DLV
Sbjct: 42 KYLPLFRDIFKTPTDELPRTHRGRKQRRHPCTVTEVFNFCWILFIH-AKGNFPMISDDLV 100
Query: 733 DMYHILLSCLDYIFANAFM-ARRVDIINPELK 825
+ YH+LL LD ++ NA + + R D++NP K
Sbjct: 101 NSYHLLLCALDLVYCNALLCSSRKDLLNPAFK 132
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +3
Query: 432 SLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFRE 557
SLI+FF K+K W +MA++ DF++ +LE F V+SV+F++
Sbjct: 1 SLIEFFSKMKKWQDMANLPRDFQQSTEKLERNFTVTSVIFKK 42
>UniRef50_UPI0000E4A91F Cluster: PREDICTED: similar to p107; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
p107 - Strongylocentrotus purpuratus
Length = 985
Score = 46.4 bits (105), Expect = 0.001
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +1
Query: 718 ANDLVDMYHILLSCLDYIFANAFMARRVDIINPELK 825
++DLV+ YH+LL LD +FANA +A R D++NPE +
Sbjct: 518 SDDLVNSYHLLLCSLDLMFANAVLANRRDLLNPEFQ 553
>UniRef50_Q9VF04 Cluster: CG5083-PA; n=2; Drosophila
melanogaster|Rep: CG5083-PA - Drosophila melanogaster
(Fruit fly)
Length = 783
Score = 41.1 bits (92), Expect = 0.036
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Frame = +3
Query: 294 DGDELHWMACALYVACRTSVTPTV-----QTGKVVEGNC---VSLTKLLRLCNLSLIQFF 449
+ D W+ CA+Y + S + + V NC VSLT+LLR +++ QF
Sbjct: 51 EADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLRSFKMNVSQFL 110
Query: 450 IKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++++W + F+ + L + ++S L R
Sbjct: 111 RRMEHWNWLTQNENTFQLEVEELRCRLGITSTLLR 145
>UniRef50_P77338 Cluster: Potassium efflux system kefA precursor;
n=49; Enterobacteriaceae|Rep: Potassium efflux system
kefA precursor - Escherichia coli (strain K12)
Length = 1120
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 435 LIQFFIKIKNWMEMASMS-TDFKERISRLEHKFAVSSVLFREVPT 566
L+Q IK+KNW+E A S + KE+I+ L+ +S +L+++ T
Sbjct: 311 LMQQNIKVKNWLERALQSERNIKEQIAVLKGSLLLSRILYQQQQT 355
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,033,521
Number of Sequences: 1657284
Number of extensions: 16299383
Number of successful extensions: 34556
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 33308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34526
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -