Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C03
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937...    31   0.93 
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980...    29   3.7  

>09_02_0434 +
           9365038-9366150,9367352-9368680,9368906-9370012,
           9370960-9371022
          Length = 1203

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 339 KPHTMRMPSNVIHHHLVYNFVLFLKKNLSISSQLMNRRLN*NKD 208
           K H ++  +N  H H  + FV+F+  + +I  Q+  RRL  N+D
Sbjct: 511 KTHILKKINNSFHEHSDFQFVIFVTASRNIREQIA-RRLGINQD 553


>05_03_0201 -
           9762563-9762843,9763037-9763919,9763988-9764036,
           9806710-9807680
          Length = 727

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 4/21 (19%)
 Frame = -1

Query: 374 SCLHCR----SDRCPTSHIQC 324
           +C+HC     SDRCPTS I C
Sbjct: 209 TCVHCEEDHPSDRCPTSRITC 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,146,824
Number of Sequences: 37544
Number of extensions: 439015
Number of successful extensions: 780
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)