Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C03
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein. 134 4e-31
BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1 (... 134 4e-31
AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1 (... 134 4e-31
AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1 (... 134 4e-31
AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1 (... 134 4e-31
AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1 (... 134 4e-31
AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1 (... 134 4e-31
AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1 (... 134 4e-31
X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein. 120 9e-27
S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein. 120 9e-27
BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (... 120 9e-27
X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein. 109 1e-23
M74547-1|AAA36397.1| 935|Homo sapiens p107 protein. 66 2e-10
Z98883-3|CAM26443.1| 281|Homo sapiens RAB40C, member RAS oncoge... 31 5.5
Z84479-1|CAB06484.2| 281|Homo sapiens RAB40C, member RAS oncoge... 31 5.5
BC028696-1|AAH28696.1| 281|Homo sapiens RAB40C, member RAS onco... 31 5.5
AE006464-4|AAK61236.1| 281|Homo sapiens RAR (RAS like GTPase) l... 31 5.5
>L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein.
Length = 1068
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 134 bits (324), Expect = 4e-31
Identities = 60/121 (49%), Positives = 85/121 (70%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
E ++ LC LN+ F+ I+ NY L+G+ HW+AC+LYVACR S+ PTV G
Sbjct: 19 EALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG 78
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++EGNCVSLT++LR LSLIQFF K+K WM+M+++ +F+ERI RLE F VS+V+F+
Sbjct: 79 -IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFK 137
Query: 555 E 557
+
Sbjct: 138 K 138
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 138 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 197
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 228
>X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.
Length = 1139
Score = 120 bits (288), Expect = 9e-27
Identities = 56/121 (46%), Positives = 81/121 (66%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
++ ++LCS LN+ + + +Y L+G++LHW+ACALYVACR SV PTV G
Sbjct: 47 QRFDELCSRLNMDEAARPEAWDSYRSMSESYTLEGNDLHWLACALYVACRKSV-PTVSKG 105
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
VEGN VSLT++L+ SLI+FF K+K W +MA++ F+ER RLE F VS+V+F+
Sbjct: 106 -TVEGNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFK 164
Query: 555 E 557
+
Sbjct: 165 K 165
Score = 56.0 bits (129), Expect = 2e-07
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF ++F E +Q R+ + QPC+ + + V + ++DLV+
Sbjct: 165 KYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVN 224
Query: 736 MYHILLSCLDYIFANAFM-ARRVDIINPELKDYXQ-XX*NDSKCQNSSMC 879
YH+LL LD ++ NA + R +++NP K + DSK + C
Sbjct: 225 SYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPC 274
>S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein.
Length = 1139
Score = 120 bits (288), Expect = 9e-27
Identities = 56/121 (46%), Positives = 81/121 (66%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
++ ++LCS LN+ + + +Y L+G++LHW+ACALYVACR SV PTV G
Sbjct: 47 QRFDELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRKSV-PTVSKG 105
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
VEGN VSLT++L+ SLI+FF K+K W +MA++ F+ER RLE F VS+V+F+
Sbjct: 106 -TVEGNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFK 164
Query: 555 E 557
+
Sbjct: 165 K 165
Score = 56.0 bits (129), Expect = 2e-07
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF ++F E +Q R+ + QPC+ + + V + ++DLV+
Sbjct: 165 KYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVN 224
Query: 736 MYHILLSCLDYIFANAFM-ARRVDIINPELKDYXQ-XX*NDSKCQNSSMC 879
YH+LL LD ++ NA + R +++NP K + DSK + C
Sbjct: 225 SYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPC 274
>BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2
(p130) protein.
Length = 1139
Score = 120 bits (288), Expect = 9e-27
Identities = 56/121 (46%), Positives = 81/121 (66%)
Frame = +3
Query: 195 EKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTG 374
++ ++LCS LN+ + + +Y L+G++LHW+ACALYVACR SV PTV G
Sbjct: 47 QRFDELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRKSV-PTVSKG 105
Query: 375 KVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
VEGN VSLT++L+ SLI+FF K+K W +MA++ F+ER RLE F VS+V+F+
Sbjct: 106 -TVEGNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFK 164
Query: 555 E 557
+
Sbjct: 165 K 165
Score = 56.0 bits (129), Expect = 2e-07
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF ++F E +Q R+ + QPC+ + + V + ++DLV+
Sbjct: 165 KYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVN 224
Query: 736 MYHILLSCLDYIFANAFM-ARRVDIINPELKDYXQ-XX*NDSKCQNSSMC 879
YH+LL LD ++ NA + R +++NP K + DSK + C
Sbjct: 225 SYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPC 274
>X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein.
Length = 1082
Score = 109 bits (263), Expect = 1e-23
Identities = 51/98 (52%), Positives = 71/98 (72%)
Frame = +3
Query: 264 FSEIKRNYILDGDELHWMACALYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQ 443
+ + +Y L+G++LHW+ACALYVACR SV PTV G VEGN VSLT++L+ SLI+
Sbjct: 13 YRSMSESYTLEGNDLHWLACALYVACRKSV-PTVSKG-TVEGNYVSLTRILKCSEQSLIE 70
Query: 444 FFIKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFRE 557
FF K+K W +MA++ F+ER RLE F VS+V+F++
Sbjct: 71 FFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKK 108
Score = 56.4 bits (130), Expect = 1e-07
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*V-YMVFVHLCERRIHNSANDLV 732
K++PIF ++F E +Q R+ + QPC+ + + +M+F++ + ++DLV
Sbjct: 108 KYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCWMLFIY-AKGNFPMISDDLV 166
Query: 733 DMYHILLSCLDYIFANAFM-ARRVDIINPELKDYXQ-XX*NDSKCQNSSMC 879
+ YH+LL LD ++ NA + R +++NP K + DSK + C
Sbjct: 167 NSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPC 217
>M74547-1|AAA36397.1| 935|Homo sapiens p107 protein.
Length = 935
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 556 KFQPIFMELFVGLTNEPVKQVSKRRPKLQPCSTNALX*VYMVFVHLCERRIHNSANDLVD 735
K++PIF+++F EP K R+ + PCS L + +DLV+
Sbjct: 5 KYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVN 64
Query: 736 MYHILLSCLDYIFANAFMA-RRVDIINPELK 825
YH+LL CLD IFANA M R D++NP K
Sbjct: 65 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFK 95
>Z98883-3|CAM26443.1| 281|Homo sapiens RAB40C, member RAS oncogene
family protein.
Length = 281
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/118 (22%), Positives = 55/118 (46%)
Frame = +3
Query: 327 LYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKER 506
L++A + V PT Q E NC++ ++ LCN ++I+ F ++ + M E+
Sbjct: 128 LHLAFKRQV-PTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLM----RHGMEK 182
Query: 507 ISRLEHKFAVSSVLFREVPTDFHGTVCWVNK*ACKTSLEEKTKTATMFNKCLXLSLHG 680
I R F++ + R + + V ++K +++ K+ +M N + +HG
Sbjct: 183 IWRPNRVFSLQDLCCRAIVS--CTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMMHG 238
>Z84479-1|CAB06484.2| 281|Homo sapiens RAB40C, member RAS oncogene
family protein.
Length = 281
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/118 (22%), Positives = 55/118 (46%)
Frame = +3
Query: 327 LYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKER 506
L++A + V PT Q E NC++ ++ LCN ++I+ F ++ + M E+
Sbjct: 128 LHLAFKRQV-PTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLM----RHGMEK 182
Query: 507 ISRLEHKFAVSSVLFREVPTDFHGTVCWVNK*ACKTSLEEKTKTATMFNKCLXLSLHG 680
I R F++ + R + + V ++K +++ K+ +M N + +HG
Sbjct: 183 IWRPNRVFSLQDLCCRAIVS--CTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMMHG 238
>BC028696-1|AAH28696.1| 281|Homo sapiens RAB40C, member RAS
oncogene family protein.
Length = 281
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/118 (22%), Positives = 55/118 (46%)
Frame = +3
Query: 327 LYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKER 506
L++A + V PT Q E NC++ ++ LCN ++I+ F ++ + M E+
Sbjct: 128 LHLAFKRQV-PTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLM----RHGMEK 182
Query: 507 ISRLEHKFAVSSVLFREVPTDFHGTVCWVNK*ACKTSLEEKTKTATMFNKCLXLSLHG 680
I R F++ + R + + V ++K +++ K+ +M N + +HG
Sbjct: 183 IWRPNRVFSLQDLCCRAIVS--CTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMMHG 238
>AE006464-4|AAK61236.1| 281|Homo sapiens RAR (RAS like GTPase) like
protein.
Length = 281
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/118 (22%), Positives = 55/118 (46%)
Frame = +3
Query: 327 LYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFKER 506
L++A + V PT Q E NC++ ++ LCN ++I+ F ++ + M E+
Sbjct: 128 LHLAFKRQV-PTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLM----RHGMEK 182
Query: 507 ISRLEHKFAVSSVLFREVPTDFHGTVCWVNK*ACKTSLEEKTKTATMFNKCLXLSLHG 680
I R F++ + R + + V ++K +++ K+ +M N + +HG
Sbjct: 183 IWRPNRVFSLQDLCCRAIVS--CTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMMHG 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,554,418
Number of Sequences: 237096
Number of extensions: 2427335
Number of successful extensions: 3855
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3826
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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