Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_C03
(881 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X96975-1|CAA65661.1| 797|Drosophila melanogaster RBF protein. 102 6e-22
AY089532-1|AAL90270.1| 845|Drosophila melanogaster LD02906p pro... 102 6e-22
AL031583-5|CAA20903.1| 845|Drosophila melanogaster EG:34F3.3,FB... 102 6e-22
AE014298-109|AAF45551.1| 845|Drosophila melanogaster CG7413-PA ... 102 6e-22
AY071301-1|AAL48923.1| 783|Drosophila melanogaster RE32990p pro... 41 0.002
AF197059-1|AAF62399.1| 783|Drosophila melanogaster retinoblasto... 41 0.002
AF195899-1|AAF66827.1| 782|Drosophila melanogaster RB-related p... 41 0.002
AE014297-2127|AAF55258.1| 783|Drosophila melanogaster CG5083-PA... 41 0.002
AY047549-1|AAK77281.1| 722|Drosophila melanogaster GH05946p pro... 38 0.018
AY122177-1|AAM52689.1| 946|Drosophila melanogaster LD35811p pro... 30 3.7
AE014134-3034|AAN11025.1| 946|Drosophila melanogaster CG10702-P... 30 3.7
AE014134-3033|AAN11024.1| 946|Drosophila melanogaster CG10702-P... 30 3.7
AE014134-3032|AAF53753.1| 946|Drosophila melanogaster CG10702-P... 30 3.7
AY084097-1|AAL89835.1| 166|Drosophila melanogaster AT04449p pro... 29 8.5
AE014297-3554|AAN13997.1| 166|Drosophila melanogaster CG31128-P... 29 8.5
>X96975-1|CAA65661.1| 797|Drosophila melanogaster RBF protein.
Length = 797
Score = 102 bits (245), Expect = 6e-22
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 147 INSIIMPKSDENEDWIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACA 326
++ ++ D E + +LC +LN+ + E+ + ++G HWM CA
Sbjct: 14 VSGLVATSDDRLEMINAEYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCA 73
Query: 327 LYVACRTSVTPTVQTGK--VVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFK 500
+Y ACR + TPTV TG+ VV+GNCVSL LLR C +S+ +F KIK W +MA++ +F
Sbjct: 74 IYTACRRTSTPTV-TGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFV 132
Query: 501 ERISRLEHKFAVSSVLFR 554
I L+ KF+++ +L +
Sbjct: 133 NEIEDLDRKFSITFMLHK 150
Score = 37.9 bits (84), Expect = 0.018
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 724 DLVDMYHILLSCLDYIFANAFMARRVDIINPELK 825
DLV Y++++ C+D I+ N +R D+INP+ +
Sbjct: 210 DLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFE 243
>AY089532-1|AAL90270.1| 845|Drosophila melanogaster LD02906p
protein.
Length = 845
Score = 102 bits (245), Expect = 6e-22
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 147 INSIIMPKSDENEDWIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACA 326
++ ++ D E + +LC +LN+ + E+ + ++G HWM CA
Sbjct: 14 VSGLVATSDDRLEMINAEYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCA 73
Query: 327 LYVACRTSVTPTVQTGK--VVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFK 500
+Y ACR + TPTV TG+ VV+GNCVSL LLR C +S+ +F KIK W +MA++ +F
Sbjct: 74 IYTACRRTSTPTV-TGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFV 132
Query: 501 ERISRLEHKFAVSSVLFR 554
I L+ KF+++ +L +
Sbjct: 133 NEIEDLDRKFSITFMLHK 150
Score = 37.9 bits (84), Expect = 0.018
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 724 DLVDMYHILLSCLDYIFANAFMARRVDIINPELK 825
DLV Y++++ C+D I+ N +R D+INP+ +
Sbjct: 210 DLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFE 243
>AL031583-5|CAA20903.1| 845|Drosophila melanogaster
EG:34F3.3,FBgn0015799;Rbf protein.
Length = 845
Score = 102 bits (245), Expect = 6e-22
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 147 INSIIMPKSDENEDWIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACA 326
++ ++ D E + +LC +LN+ + E+ + ++G HWM CA
Sbjct: 14 VSGLVATSDDRLEMINAEYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCA 73
Query: 327 LYVACRTSVTPTVQTGK--VVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFK 500
+Y ACR + TPTV TG+ VV+GNCVSL LLR C +S+ +F KIK W +MA++ +F
Sbjct: 74 IYTACRRTSTPTV-TGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFV 132
Query: 501 ERISRLEHKFAVSSVLFR 554
I L+ KF+++ +L +
Sbjct: 133 NEIEDLDRKFSITFMLHK 150
Score = 37.9 bits (84), Expect = 0.018
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 724 DLVDMYHILLSCLDYIFANAFMARRVDIINPELK 825
DLV Y++++ C+D I+ N +R D+INP+ +
Sbjct: 210 DLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFE 243
>AE014298-109|AAF45551.1| 845|Drosophila melanogaster CG7413-PA
protein.
Length = 845
Score = 102 bits (245), Expect = 6e-22
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 147 INSIIMPKSDENEDWIEKMEDLCSNLNVXXXXXXXXXXXFSEIKRNYILDGDELHWMACA 326
++ ++ D E + +LC +LN+ + E+ + ++G HWM CA
Sbjct: 14 VSGLVATSDDRLEMINAEYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCA 73
Query: 327 LYVACRTSVTPTVQTGK--VVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMSTDFK 500
+Y ACR + TPTV TG+ VV+GNCVSL LLR C +S+ +F KIK W +MA++ +F
Sbjct: 74 IYTACRRTSTPTV-TGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFV 132
Query: 501 ERISRLEHKFAVSSVLFR 554
I L+ KF+++ +L +
Sbjct: 133 NEIEDLDRKFSITFMLHK 150
Score = 37.9 bits (84), Expect = 0.018
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 724 DLVDMYHILLSCLDYIFANAFMARRVDIINPELK 825
DLV Y++++ C+D I+ N +R D+INP+ +
Sbjct: 210 DLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFE 243
>AY071301-1|AAL48923.1| 783|Drosophila melanogaster RE32990p
protein.
Length = 783
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Frame = +3
Query: 294 DGDELHWMACALYVACRTSVTPTV-----QTGKVVEGNC---VSLTKLLRLCNLSLIQFF 449
+ D W+ CA+Y + S + + V NC VSLT+LLR +++ QF
Sbjct: 51 EADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLRSFKMNVSQFL 110
Query: 450 IKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++++W + F+ + L + ++S L R
Sbjct: 111 RRMEHWNWLTQNENTFQLEVEELRCRLGITSTLLR 145
>AF197059-1|AAF62399.1| 783|Drosophila melanogaster retinoblastoma
protein homologRBF2 protein.
Length = 783
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Frame = +3
Query: 294 DGDELHWMACALYVACRTSVTPTV-----QTGKVVEGNC---VSLTKLLRLCNLSLIQFF 449
+ D W+ CA+Y + S + + V NC VSLT+LLR +++ QF
Sbjct: 51 EADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLRSFKMNVSQFL 110
Query: 450 IKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++++W + F+ + L + ++S L R
Sbjct: 111 RRMEHWNWLTQNENTFQLEVEELRCRLGITSTLLR 145
>AF195899-1|AAF66827.1| 782|Drosophila melanogaster RB-related
protein RBF2 protein.
Length = 782
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Frame = +3
Query: 294 DGDELHWMACALYVACRTSVTPTV-----QTGKVVEGNC---VSLTKLLRLCNLSLIQFF 449
+ D W+ CA+Y + S + + V NC VSLT+LLR +++ QF
Sbjct: 51 EADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLRSFKMNVSQFL 110
Query: 450 IKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++++W + F+ + L + ++S L R
Sbjct: 111 RRMEHWNWLTQNENTFQLEVEELRCRLGITSTLLR 145
>AE014297-2127|AAF55258.1| 783|Drosophila melanogaster CG5083-PA
protein.
Length = 783
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Frame = +3
Query: 294 DGDELHWMACALYVACRTSVTPTV-----QTGKVVEGNC---VSLTKLLRLCNLSLIQFF 449
+ D W+ CA+Y + S + + V NC VSLT+LLR +++ QF
Sbjct: 51 EADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLRSFKMNVSQFL 110
Query: 450 IKIKNWMEMASMSTDFKERISRLEHKFAVSSVLFR 554
++++W + F+ + L + ++S L R
Sbjct: 111 RRMEHWNWLTQNENTFQLEVEELRCRLGITSTLLR 145
>AY047549-1|AAK77281.1| 722|Drosophila melanogaster GH05946p
protein.
Length = 722
Score = 37.9 bits (84), Expect = 0.018
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 724 DLVDMYHILLSCLDYIFANAFMARRVDIINPELK 825
DLV Y++++ C+D I+ N +R D+INP+ +
Sbjct: 87 DLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFE 120
>AY122177-1|AAM52689.1| 946|Drosophila melanogaster LD35811p
protein.
Length = 946
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 694 CERRIHNSANDLVDMYHILLSCLDYIFANAFMARRVDIINPELKD 828
C R+H+ A D++ Y + C D AF +R ++PE+ D
Sbjct: 815 CAVRVHSLAGDVMTPYMPISLCSDEDRLQAFHSREAKDLSPEITD 859
>AE014134-3034|AAN11025.1| 946|Drosophila melanogaster CG10702-PC,
isoform C protein.
Length = 946
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 694 CERRIHNSANDLVDMYHILLSCLDYIFANAFMARRVDIINPELKD 828
C R+H+ A D++ Y + C D AF +R ++PE+ D
Sbjct: 815 CAVRVHSLAGDVMTPYMPISLCSDEDRLQAFHSREAKDLSPEITD 859
>AE014134-3033|AAN11024.1| 946|Drosophila melanogaster CG10702-PB,
isoform B protein.
Length = 946
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 694 CERRIHNSANDLVDMYHILLSCLDYIFANAFMARRVDIINPELKD 828
C R+H+ A D++ Y + C D AF +R ++PE+ D
Sbjct: 815 CAVRVHSLAGDVMTPYMPISLCSDEDRLQAFHSREAKDLSPEITD 859
>AE014134-3032|AAF53753.1| 946|Drosophila melanogaster CG10702-PA,
isoform A protein.
Length = 946
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 694 CERRIHNSANDLVDMYHILLSCLDYIFANAFMARRVDIINPELKD 828
C R+H+ A D++ Y + C D AF +R ++PE+ D
Sbjct: 815 CAVRVHSLAGDVMTPYMPISLCSDEDRLQAFHSREAKDLSPEITD 859
>AY084097-1|AAL89835.1| 166|Drosophila melanogaster AT04449p
protein.
Length = 166
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +3
Query: 312 WMACALYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMST 491
W+ +L ++ GK+ E C + K+ R C +S F K K E S
Sbjct: 10 WIIVSLCYIGLGGALKDLKEGKIAEPLCSNCNKIQRKCTVSHSGLFCKNKTDKEKILFSH 69
Query: 492 DFKERISRLE----HKFAVS 539
E++ L+ HK+ V+
Sbjct: 70 SLAEKLYNLDECVPHKYNVT 89
>AE014297-3554|AAN13997.1| 166|Drosophila melanogaster CG31128-PA
protein.
Length = 166
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +3
Query: 312 WMACALYVACRTSVTPTVQTGKVVEGNCVSLTKLLRLCNLSLIQFFIKIKNWMEMASMST 491
W+ +L ++ GK+ E C + K+ R C +S F K K E S
Sbjct: 10 WIIVSLCYIGLGGALKDLKEGKIAEPLCSNCNKIQRKCTVSHSGLFCKNKTDKEKILFSH 69
Query: 492 DFKERISRLE----HKFAVS 539
E++ L+ HK+ V+
Sbjct: 70 SLAEKLYNLDECVPHKYNVT 89
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,904,131
Number of Sequences: 53049
Number of extensions: 778252
Number of successful extensions: 1639
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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