Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C02
         (865 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   7.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.4  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   9.4  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 36  KILVKSYVKVENRNYPKN 89
           K+LVK + K  NRN   N
Sbjct: 87  KVLVKDFDKFTNRNIATN 104


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 640 VKYXSDFSYYFAHNYLKLH 584
           +K  +DF YY ++++ K++
Sbjct: 420 LKEKADFQYYVSYDFYKMN 438


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 159 VLSHFHVNPTAPSLQNAK 212
           VL   H  PT   LQN K
Sbjct: 29  VLGDIHAKPTYSDLQNLK 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,687
Number of Sequences: 336
Number of extensions: 3035
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)