Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_C02
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0228 + 21497248-21498143,21499831-21501700,21501934-215020...    29   4.8  
11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845     29   4.8  
07_01_0168 + 1179292-1180354,1180880-1180923                           29   4.8  
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308...    29   4.8  
11_06_0229 + 21512943-21513237,21513273-21513756,21514668-21516657     29   6.3  

>11_06_0228 +
           21497248-21498143,21499831-21501700,21501934-21502038,
           21502139-21502232,21502335-21502363
          Length = 997

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = -1

Query: 754 SVILLLSNMAYKSGIKXAIIMFYIIAIKFKDSNNNIHQVKYXSDFSYYFAHNYLKLHIMN 575
           S+I + S +  K   + ++I +  I+    D N  +  ++    FSYY   +YLK  ++ 
Sbjct: 398 SIITIASLLVDKPAREWSVI-YDSISFGTGDQNEAVQNMRKILSFSYYHLPSYLKTCMLY 456

Query: 574 LQLASKDLL 548
           L +  +D L
Sbjct: 457 LSIYPEDHL 465


>11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845
          Length = 958

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = -1

Query: 748 ILLLSNMAYKSGIKXAIIMFYIIAIKFKDSNNNIHQVKYXSDFSYYFAHNYLKLHIMNLQ 569
           I+ +S++     +     ++  I  + +D N  +   +    FSYY    YLK  ++ L 
Sbjct: 382 IITISSLLVDKPVGDWSAIYDSIGFRTRDQNEAVQNTRKILSFSYYHLPTYLKTCMLYLS 441

Query: 568 LASKDLL 548
           +  +D L
Sbjct: 442 IYPEDHL 448


>07_01_0168 + 1179292-1180354,1180880-1180923
          Length = 368

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 355 NVWSAYEKHGRNVFKEDGLHLILVDCLNGKIAITQVANLLLCLYANEAV 501
           N W    +HGR +F+   + L + D + G +   +     LC +A  AV
Sbjct: 96  NCWPLDCRHGRALFQSSNVELTIWDPMTGDVRRQREPYGTLCTFATAAV 144


>03_02_0924 +
           12429764-12430120,12430562-12430637,12430803-12430849,
           12431850-12431962,12432056-12432129,12432258-12432353,
           12432440-12432559,12432660-12432893,12433486-12433634,
           12434145-12434301,12434387-12434542,12435359-12435735,
           12435871-12436020,12437071-12437253,12437440-12437643,
           12437869-12437975,12438253-12438406,12438796-12438917,
           12439541-12439787
          Length = 1040

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +1

Query: 199 FKMLKPKPLTEVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEK 378
           F  L    L EVL QA    +E ++ +      L   GYNDK + + ++I +   S   K
Sbjct: 638 FVNLLKDELNEVLYQAYVAKLETSMSVVGSNLELKLYGYNDKLSTLLSSILAASQSFSPK 697

Query: 379 HGR-NVFKED 405
             R  V KED
Sbjct: 698 SDRFEVIKED 707


>11_06_0229 + 21512943-21513237,21513273-21513756,21514668-21516657
          Length = 922

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 18/69 (26%), Positives = 33/69 (47%)
 Frame = -1

Query: 754 SVILLLSNMAYKSGIKXAIIMFYIIAIKFKDSNNNIHQVKYXSDFSYYFAHNYLKLHIMN 575
           S+I + S + +K  ++    ++  I     D N  +H  +    FSYY    YLK  +++
Sbjct: 367 SIITMASLLVHKP-LEDWSDVYESIGFGSTDQNEVVHNTRKILSFSYYDLPLYLKTCMLH 425

Query: 574 LQLASKDLL 548
           L +  +D L
Sbjct: 426 LSIYPEDHL 434


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,712,174
Number of Sequences: 37544
Number of extensions: 263285
Number of successful extensions: 586
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)