Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B23
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z83238-6|CAB05800.1|  943|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81129-2|CAB03407.1|  315|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z48621-12|CAA88545.2|  425|Caenorhabditis elegans Hypothetical p...    28   7.8  

>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
           protein F43G6.1b protein.
          Length = 1069

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 100 LKSIIKSKXAVCC*CYYLIIRLIFNYRNIKVK*SDEKS 213
           ++ ++K+   V C C+++   L+F+YR+  V   DE S
Sbjct: 756 VRKVMKTTPIVACTCHHVPRELLFSYRHFDVVIVDEAS 793


>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
           protein F43G6.1a protein.
          Length = 1105

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 100 LKSIIKSKXAVCC*CYYLIIRLIFNYRNIKVK*SDEKS 213
           ++ ++K+   V C C+++   L+F+YR+  V   DE S
Sbjct: 792 VRKVMKTTPIVACTCHHVPRELLFSYRHFDVVIVDEAS 829


>Z83238-6|CAB05800.1|  943|Caenorhabditis elegans Hypothetical
           protein T08G3.7 protein.
          Length = 943

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +3

Query: 225 QFLVYVSSTSAGLAS*SNRISFTTVCSEDPKRGNNRRSHT*LLKLPVLISNV*RGRNTLE 404
           + L  +  T A L +  N + F  + + D  R N+R+ +  L KL V  SN    +NTLE
Sbjct: 181 RILSTIKDTIAALNNTMNFMVFPDIPARDVFRDNSRKVYWTLDKLKVNASNAITVKNTLE 240


>Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical
           protein T05E12.4 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 615 SFVTSFWIFATNYCESIFICCIVSKVFRLPLQTLLIK 505
           ++   F + A N    I IC ++S V+R+ L+++  K
Sbjct: 295 TYYAMFTVRAVNSLSHILICALMSTVYRMELKSIFCK 331


>Z81129-2|CAB03407.1|  315|Caenorhabditis elegans Hypothetical
           protein T23F1.4 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 569 LYLYVV*FLRYSDFLFKHCLLRLAILAVKCDCFHCYLFV 453
           LYL +V F+    F+++HC L     A K D   C+L++
Sbjct: 97  LYLVIVSFISVQ-FIYRHCCLSNVRWAKKFDGLGCFLWM 134


>Z48621-12|CAA88545.2|  425|Caenorhabditis elegans Hypothetical
           protein R07B1.8 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 563 NIDSQ*FVAKIQKEVTKEGVTMTAKTAILNKQCL 664
           ++D +   AKIQ++VT   +T     AI+N QC+
Sbjct: 302 SLDEEPTSAKIQEQVTPAQLTFDTPGAIVNGQCM 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,487,804
Number of Sequences: 27780
Number of extensions: 272561
Number of successful extensions: 663
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)