Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B18
         (899 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    31   0.036
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.4  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       24   7.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 31.5 bits (68), Expect = 0.036
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 11/93 (11%)
 Frame = +3

Query: 405 MKRQQNESRYRCDVCDLTFQAMDYLILHKKFH--GNE-----KDLPIPPPEQTS----TK 551
           M+    E  Y CDVC   F   + L  HK  H  GN+     K  P     +T      +
Sbjct: 259 MRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQ 318

Query: 552 DAPKKRRKFKCDQCDVKVNSQYHLDIXQSKHEG 650
           +     +  KC +CD     +Y   +    HEG
Sbjct: 319 NLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEG 351



 Score = 29.5 bits (63), Expect = 0.15
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 420 NESRYRCDVCDLTFQAMDYLILHKKFHGNEKDLPIPPPEQTSTKDAPKKRRKFK 581
           ++  Y+CD C  TF+    L  H  ++ N  D   P P +  T   P  +R F+
Sbjct: 379 DQKPYKCDQCAQTFRQKQLLKRHMNYYHN-PDYVAPTP-KAKTHICPTCKRPFR 430



 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +3

Query: 411 RQQNESRYRCDVCDLTFQAMDYLILHKKFHGNEKDLPIP 527
           R  +E  ++C  CD     +  L  H + H  EK    P
Sbjct: 205 RHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCP 243


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 372 FFLVLQSNGHCCRCRQAPSCS-SSSDLGFRRPIL 274
           FF   +S+ HC +  +  SCS +++ L +R P L
Sbjct: 34  FFSTRRSSAHCTQQTRQASCSDNAAQLTYRLPAL 67


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 564 FSARPLSKSAPAGVLANPFRSRET 493
           F+A  L+++APA V++ P  +R+T
Sbjct: 47  FAAPALTQAAPAPVVSQPPATRDT 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,051
Number of Sequences: 2352
Number of extensions: 14781
Number of successful extensions: 55
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)