Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B17
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical pr...    34   0.16 
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z71258-3|CAA95778.1|  187|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U41033-3|AAA82375.1|  109|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical protein
            F56A8.1 protein.
          Length = 1049

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
 Frame = +3

Query: 282  EIKELLENYKHKRSSVYEPCKIGNIKECLIGLREELGVF-NISYLFNPYNDIEDEILLPG 458
            E +E LE   H+  S + P     +K+ L  L E +  F ++S  F+ +   E +I    
Sbjct: 913  ESREALERTAHRSDSPF-PHGSELLKDALSKLHENIAFFTDLSLAFSKF--FETKIQKDR 969

Query: 459  SLVTLINSIWTLLHYHKNAV------QKVEKLMEQNHILEQNNKQLNSF 587
             L TLI  +W   +  K  +      +KV+ + +Q+  +E+N K  NS+
Sbjct: 970  KLKTLI--VWAYNYSIKTGIFDEETEKKVQLMAQQHEFIEKNEKFFNSY 1016


>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
           protein F21C10.7 protein.
          Length = 2541

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 411 LFNPYNDIEDEILLPGSLVTLINSIWTLLHYH-KNAVQKVEKLMEQNHILEQNNKQLNSF 587
           L + +  +  ++LL G ++      +TL   H K +  K  ++++Q  I EQN++QL S 
Sbjct: 151 LRSTWRSLNRQLLLRGYMLRETVQFYTLAESHEKLSNAKTIEIVQQ--INEQNSQQLQSS 208

Query: 588 VDKL 599
           +DKL
Sbjct: 209 IDKL 212


>Z71258-3|CAA95778.1|  187|Caenorhabditis elegans Hypothetical
           protein C01H6.3 protein.
          Length = 187

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 489 TLLHYHKNAVQKVEKLMEQNHILEQNNKQ 575
           +LL + KN ++ + K++EQ  +  QNN++
Sbjct: 18  SLLIHEKNCIESMHKILEQEKLKMQNNQK 46


>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -3

Query: 750 LSFAFFCLVT*SSLLWFLLMFATLHLNGLL 661
           L + +FC++  +SL++F ++F+T   N +L
Sbjct: 171 LQYGYFCVIAITSLVYFNVIFSTEAFNSVL 200


>U41033-3|AAA82375.1|  109|Caenorhabditis elegans Hypothetical
           protein K09E3.2 protein.
          Length = 109

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 805 CPTFFHFDLKSRYFXVIISFVRFFLLGH 722
           CP   H D  +    VI SF+RF+LL H
Sbjct: 53  CPLLAHQDDGTLANFVIFSFIRFWLLAH 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,681,842
Number of Sequences: 27780
Number of extensions: 294384
Number of successful extensions: 752
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)