Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_B12
(1105 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.068
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.068
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.068
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.84
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.84
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.84
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.84
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.84
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 30 3.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 3.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.4
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 5.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.9
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 7.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 7.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 7.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 7.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 7.8
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 7.8
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 7.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.068
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = +1
Query: 442 PALAPPPRHXEXGXP-----GXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCPXX 606
PA +PPP G P G P PP P G P P S P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 607 HLGXSXRAPXPXAXPSXGXL 666
G P P P G L
Sbjct: 293 RAGSPPPPPPPRGSPPTGSL 312
Score = 32.3 bits (70), Expect = 0.63
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXP--GXXPAPPXXXXXPXXXGGGAAPXPXXS 567
P P G S + PPP P G P PP P GG P S
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 568 XPXRXPPXXCP 600
P PP P
Sbjct: 297 PPPPPPPRGSP 307
Score = 29.5 bits (63), Expect = 4.5
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = +1
Query: 406 PXXGGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP---XXSXPX 576
P GG PPP P PP P G G+ P P P
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 341
Query: 577 RXPPXXCPXXHLGXSXRAP 633
R PP P + R P
Sbjct: 342 RSPPTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.068
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = +1
Query: 442 PALAPPPRHXEXGXP-----GXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCPXX 606
PA +PPP G P G P PP P G P P S P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 607 HLGXSXRAPXPXAXPSXGXL 666
G P P P G L
Sbjct: 314 RAGSPPPPPPPRGSPPTGSL 333
Score = 32.3 bits (70), Expect = 0.63
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXP--GXXPAPPXXXXXPXXXGGGAAPXPXXS 567
P P G S + PPP P G P PP P GG P S
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 568 XPXRXPPXXCP 600
P PP P
Sbjct: 318 PPPPPPPRGSP 328
Score = 29.5 bits (63), Expect = 4.5
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = +1
Query: 406 PXXGGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP---XXSXPX 576
P GG PPP P PP P G G+ P P P
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 362
Query: 577 RXPPXXCPXXHLGXSXRAP 633
R PP P + R P
Sbjct: 363 RSPPTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.068
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = +1
Query: 442 PALAPPPRHXEXGXP-----GXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCPXX 606
PA +PPP G P G P PP P G P P S P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 607 HLGXSXRAPXPXAXPSXGXL 666
G P P P G L
Sbjct: 299 RAGSPPPPPPPRGSPPTGSL 318
Score = 32.3 bits (70), Expect = 0.63
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXP--GXXPAPPXXXXXPXXXGGGAAPXPXXS 567
P P G S + PPP P G P PP P GG P S
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 568 XPXRXPPXXCP 600
P PP P
Sbjct: 303 PPPPPPPRGSP 313
Score = 29.5 bits (63), Expect = 4.5
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = +1
Query: 406 PXXGGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP---XXSXPX 576
P GG PPP P PP P G G+ P P P
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 347
Query: 577 RXPPXXCPXXHLGXSXRAP 633
R PP P + R P
Sbjct: 348 RSPPTGSPPTGSPPTGRPP 366
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.84
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP---XX 564
P P G G P + PPP G PG PP GG P P
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 357
Query: 565 SXPXRXPP 588
+ P PP
Sbjct: 358 AGPGMYPP 365
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 735 PXXXXXXPPXPRPXLXRSPXXXGRPXPPXPPP 830
P PP P P R+P G P P PPP
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 30.7 bits (66), Expect = 1.9
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Frame = +1
Query: 442 PALAPPPRHXEXGXPGXX----PAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCP-XX 606
P PPP G PG P PP P G P P P PP P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 607 HLGXSXRAPXPXAXP 651
G P P + P
Sbjct: 357 SAGPGMYPPPPPSRP 371
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 454 PPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP 558
PPPR+ G PG P PP G G P P
Sbjct: 351 PPPRYPSAG-PGMYPPPPPSRPPAPPSGHGMIPPP 384
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.84
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 PPPRHXEXGXP---GXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCPXXHLGXSX 624
PPP G P G P PP P GG P P PP P G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 625 RAPXP 639
P P
Sbjct: 786 PPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.84
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 PPPRHXEXGXP---GXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCPXXHLGXSX 624
PPP G P G P PP P GG P P PP P G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 625 RAPXP 639
P P
Sbjct: 786 PPPPP 790
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.84
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP---XX 564
P P G G P + PPP G PG PP GG P P
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 367
Query: 565 SXPXRXPP 588
+ P PP
Sbjct: 368 AGPGMYPP 375
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 735 PXXXXXXPPXPRPXLXRSPXXXGRPXPPXPPP 830
P PP P P R+P G P P PPP
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 30.7 bits (66), Expect = 1.9
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Frame = +1
Query: 442 PALAPPPRHXEXGXPGXX----PAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCP-XX 606
P PPP G PG P PP P G P P P PP P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 607 HLGXSXRAPXPXAXP 651
G P P + P
Sbjct: 367 SAGPGMYPPPPPSRP 381
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 454 PPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP 558
PPPR+ G PG P PP G G P P
Sbjct: 361 PPPRYPSAG-PGMYPPPPPSRPPAPPSGHGMIPPP 394
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.84
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 PPPRHXEXGXP---GXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCPXXHLGXSX 624
PPP G P G P PP P GG P P PP P G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 625 RAPXP 639
P P
Sbjct: 369 PPPPP 373
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 650 GXAXGXGARXDXPRXXXGXXXGGXRXGXEXXGXGAAPPPXXXGXXXXXGGAGXXPG 483
G G G P G GG G G G APPP G GG G G
Sbjct: 39 GGGCGGGGGCAPPPAPCGGGCGGGGGGC-GGGGGCAPPPAPCGGGCGGGGGGCGGG 93
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 599 GXXXGGXRXGXEXXGXGAAPPPXXXGXXXXXGGAGXXPG 483
G GG G G G APPP G GG G G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 69
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 803 APXPXPPPPP 832
AP P PPPPP
Sbjct: 301 APPPPPPPPP 310
Score = 24.2 bits (50), Expect(2) = 2.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 806 PXPXPPPPPXXXXP 847
P P PPPPP P
Sbjct: 303 PPPPPPPPPPAPAP 316
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 650 GXAXGXGARXDXPRXXXGXXXGGXRXGXEXXGXGAAPPPXXXGXXXXXGGAGXXPG 483
G G G P G GG G G G APPP G GG G G
Sbjct: 39 GGGCGGGGGCAPPPAPCGGGCGGGGGGC-GGGGGCAPPPAPCGGGCGGGGGGCGGG 93
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 599 GXXXGGXRXGXEXXGXGAAPPPXXXGXXXXXGGAGXXPG 483
G GG G G G APPP G GG G G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 69
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 803 APXPXPPPPP 832
AP P PPPPP
Sbjct: 301 APPPPPPPPP 310
Score = 24.2 bits (50), Expect(2) = 2.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 806 PXPXPPPPPXXXXP 847
P P PPPPP P
Sbjct: 303 PPPPPPPPPPAPAP 316
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/62 (35%), Positives = 23/62 (37%)
Frame = +1
Query: 415 GGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXX 594
GGG C+P PP G PG P P P G GAA S P P
Sbjct: 110 GGGCTGCCNPG--PPGPGGRPGKPG-TPGKPGAPGNPGASGKGAAAPCEPSTPPPCQP-- 164
Query: 595 CP 600
CP
Sbjct: 165 CP 166
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 838 GXXGGGXGGXGRPXXXGDRXRXGRGXG 758
G GGG GG GR G R GRG G
Sbjct: 110 GRGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 829 GGGXGGXGRPXXXGDRXRXGRGXGG 755
GG GG GRP G GRG GG
Sbjct: 37 GGRSGGWGRPGWGGGGPGWGRGGGG 61
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 735 PXXXXXXPPXPRPXLXRSPXXXGRPXPPXPPP 830
P PP P P + +P G P PP PPP
Sbjct: 514 PMSTNAPPPPPMPGM--APLSTGAPTPPPPPP 543
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
H05G16.1 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 756 PPXPRPXLXRSPXXXGRPXPPXPPP 830
PP P L ++ RP PP PPP
Sbjct: 1023 PPPPEEILNKAMISSSRPAPPPPPP 1047
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +1
Query: 415 GGGXGXLCSPALAPPPRHXEXGXPGXXPAP--PXXXXXPXXXGGGAAPXP 558
GGG G C+P PPP G G P P GGG P P
Sbjct: 22 GGGGGCGCAPP-PPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP 558
P P GG G L P L PP G G PP GGG AP P
Sbjct: 34 PPPSPCGCGGGGGLALPQL-PPLSLPSLGGGGGC-CPPPAPACGGGCGGGVAPAP 86
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.4
Identities = 23/63 (36%), Positives = 25/63 (39%)
Frame = +1
Query: 451 APPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXPXXSXPXRXPPXXCPXXHLGXSXRA 630
APPP G PG PAPP P G P P P + PP P G + A
Sbjct: 706 APPP----PGIPGYPPAPPPPGVGPPPPQG--IP-PMGFDPNKPPP---PMFQQGFNAGA 755
Query: 631 PXP 639
P P
Sbjct: 756 PPP 758
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +1
Query: 418 GGXGXLCSPALAPPPRHXEXGXPGXX--PAPPXXXXXPXXX--GGGAAPXPXXSXP 573
GG G C P + P + G PG P P P GGGAAP P P
Sbjct: 136 GGSGP-CHPVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGP 190
Score = 28.7 bits (61), Expect = 7.8
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Frame = +1
Query: 415 GGGXGXLCSPAL--APPPRHXEXGXPGXXPAPPXXXXXPXXXG-GGAAP-XPXXSXPXRX 582
GGG G CS PP G PG P P P G GG+ P P P +
Sbjct: 93 GGGGGGQCSTCCRPGPPGAGGTPGKPG-RPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKP 151
Query: 583 PPXXCP 600
P P
Sbjct: 152 CPGGRP 157
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 756 PPXPRPXLXRSPXXXGRPXPPXPPP 830
PP P P + G P PP PPP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXPGXXP-APPXXXXXPXXXGGGAAPXPXXSX 570
P P G G S L P + G P P A P P G AP +
Sbjct: 574 PPPPPPSSGTRGIAPSRPLPQAPNY---GTPENRPHAVPPPPPPPPPQSFGMAPISSAAP 630
Query: 571 PXRXPPXXCPXXHLGXSXRAPXPXAXPS 654
P PP +G P P PS
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPPS 658
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 756 PPXPRPXLXRSPXXXGRPXPPXPPP 830
PP P P + G P PP PPP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 PXXXPXXGGGXGXLCSPALAPPPRHXEXGXPGXXP-APPXXXXXPXXXGGGAAPXPXXSX 570
P P G G S L P + G P P A P P G AP +
Sbjct: 400 PPPPPPSSGTRGIAPSRPLPQAPNY---GTPENRPHAVPPPPPPPPPQSFGMAPISSAAP 456
Query: 571 PXRXPPXXCPXXHLGXSXRAPXPXAXPS 654
P PP +G P P PS
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPPS 484
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 756 PPXPRPXLXRSPXXXGRPXPPXPPPXXP 839
PP P P + ++P P PP PP P
Sbjct: 1358 PPPPPPTMSKAPTGVPLPVPPPPPLFSP 1385
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 568 GXPEGXGRPPXPXXXGXXPXGGXQAXDPGXPXXCXGGVGXE 446
G P G G PP P G P G PG P G G +
Sbjct: 438 GAPGGSGAPP-PGPPGAYPGNGAPGGPPGGPPQFPGHPGMD 477
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = -1
Query: 640 GXXXXXRTPQGXXGGXXXGAXAXGGXPE--GXGRPPXPXXXGXXPXGGXQAXDPGXP 476
G R P G GG G GG P G G PP G P G PG P
Sbjct: 159 GGGGDPRGPPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 214
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = -1
Query: 640 GXXXXXRTPQGXXGGXXXGAXAXGGXPE--GXGRPPXPXXXGXXPXGGXQAXDPGXP 476
G R P G GG G GG P G G PP G P G PG P
Sbjct: 439 GGGGDPRGPPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 494
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Frame = +1
Query: 415 GGGXGXLCSPALAPPPRHXEXGXPG-----XXPAPPXXXXXPXXXGGGAAPXP 558
G G C P PP + G PG P PP P G + P P
Sbjct: 132 GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGP 184
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Frame = +1
Query: 415 GGGXGXLCSPALAPPPRHXEXGXPG-----XXPAPPXXXXXPXXXGGGAAPXP 558
G G C P PP + G PG P PP P G + P P
Sbjct: 132 GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGP 184
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 391 FPXXXPXXGGGXGXLCSPALAPPPRHXEXGXPGXXPAPP 507
FP GGG +PA APPP P P PP
Sbjct: 20 FPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Frame = +1
Query: 415 GGGXGXLCSPALAPPPRHXEXGXPG-----XXPAPPXXXXXPXXXGGGAAPXP 558
G G C P PP + G PG P PP P G + P P
Sbjct: 132 GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGP 184
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Frame = +1
Query: 415 GGGXGXLCSPALAPPPRHXEXGXPG-----XXPAPPXXXXXPXXXGGGAAPXP 558
G G C P PP + G PG P PP P G + P P
Sbjct: 132 GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGP 184
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 838 GXXGGGXGGXGRPXXXGDRXRXGRGXGG 755
G GGG GG D+ R GRG GG
Sbjct: 840 GGGGGGGGGSYHQPYNQDQRRGGRGGGG 867
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 415 GGGXGXLCSPALAPPPRHXEXGXPGXXPAPPXXXXXPXXXGGGAAPXP 558
GGG G C+P PPP G G PA P GG P
Sbjct: 22 GGGGGGCCAP---PPPPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQP 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,545,895
Number of Sequences: 27780
Number of extensions: 209628
Number of successful extensions: 1874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2981737830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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