Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B11
         (952 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004...    29   5.4  
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331...    28   9.5  

>04_04_0824 -
           28399144-28399385,28400193-28400312,28400422-28400453,
           28400531-28400625,28400713-28400786,28400883-28401018,
           28401096-28401333,28401508-28401555,28401593-28401780,
           28401862-28401983,28402061-28402226,28402321-28402443,
           28403068-28403139,28403244-28403351,28404212-28404328,
           28404458-28404596,28404702-28404808,28404904-28405013,
           28405141-28405274,28405348-28405497,28405571-28405791,
           28405868-28406677,28410261-28410473
          Length = 1254

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
 Frame = -1

Query: 424 GGXXKXXXGGTXPPRPXXXGPKKXXPGG--XXXEXXXVQXAHKXGGGPP 284
           GG      GG  P      GP    PGG     +      +H  GGGPP
Sbjct: 148 GGQGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRGGSGSHHPGGGPP 196


>03_05_0732 -
           27232299-27232535,27232717-27232746,27233094-27233155,
           27233975-27234005,27234618-27234713,27234881-27234969,
           27235687-27236263
          Length = 373

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = -3

Query: 389 PPPPPGXGAXKXXPRRXTXRKXXSAXGTQXGGGAPVNPTXXXGXG 255
           PPPPP  GA    P R + R    A        +PV      G G
Sbjct: 82  PPPPPPMGAPGFGPFRWSPRPLRGAPLAAWDAASPVRSGGGGGGG 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,553,392
Number of Sequences: 37544
Number of extensions: 276888
Number of successful extensions: 900
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)