Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B06
         (835 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    32   0.84 
AE013599-1244|AAS64915.1|  253|Drosophila melanogaster CG13214-P...    32   0.84 
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    32   0.84 

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
 Frame = -2

Query: 459 GGGGXXXFXKKNPGXGGFLXXR---GXGXXXXXGAXXPXPHPXGXGGP 325
           GGGG   F   N G GGF   R     G     GA  P P P G   P
Sbjct: 7   GGGGAGGFGGGNNGLGGFANGRPIAPGGGGGGGGAPAPRPSPSGGAPP 54


>AE013599-1244|AAS64915.1|  253|Drosophila melanogaster CG13214-PB,
           isoform B protein.
          Length = 253

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
 Frame = -2

Query: 459 GGGGXXXFXKKNPGXGGFLXXR---GXGXXXXXGAXXPXPHPXGXGGP 325
           GGGG   F   N G GGF   R     G     GA  P P P G   P
Sbjct: 79  GGGGAGGFGGGNNGLGGFANGRPIAPGGGGGGGGAPAPRPSPSGGAPP 126


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
 Frame = -2

Query: 459 GGGGXXXFXKKNPGXGGFLXXR---GXGXXXXXGAXXPXPHPXGXGGP 325
           GGGG   F   N G GGF   R     G     GA  P P P G   P
Sbjct: 79  GGGGAGGFGGGNNGLGGFANGRPIAPGGGGGGGGAPAPRPSPSGGAPP 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,194,224
Number of Sequences: 53049
Number of extensions: 459789
Number of successful extensions: 915
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)