Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B04
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.35 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   0.80 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.80 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   1.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   7.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 560 LFRKPLLSHRPNGNSSPNVKLALN 489
           LF K L S +P   S+P +KL++N
Sbjct: 118 LFIKSLESLKPGNQSTPGIKLSIN 141


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 173 FSSTFSLIPEERAISPERPPPVPHLIRLLTWGPRLMLRPVFALLS 307
           +   F ++ EE   +P+R P +  +   L       LRP   LL+
Sbjct: 281 YCRVFKMLQEEDIFTPDRIPQLEEMSNFLKRHTGFSLRPAAGLLT 325


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 596 VHKFYSVPRPNPADPLAYARALKAIVEQESVVFYVPVSSTTPAYYDALAKPH 751
           +H   SVP+P P  P      +K  V + +V    P    T +   AL  P+
Sbjct: 181 MHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALESPN 232


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +2

Query: 596 VHKFYSVPRPNPADPLAYARALKAIVEQESVVFYVPVSSTTPAYYDALAKP 748
           +H   SVP+P P  P      +K  V + +V    P    T +   AL  P
Sbjct: 181 MHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALESP 231


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 437 ISSKGNNKPRTVLISG 484
           I + G+NKP T+L++G
Sbjct: 235 IHNDGDNKPDTILVNG 250


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 820 QRIIQCDDISS 788
           +R++ CDD+SS
Sbjct: 25  RRVVDCDDVSS 35


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 764 PPLPCVVLRERHNRPVSLNSPARR 693
           PP    VL    + P+S +SP RR
Sbjct: 213 PPQETPVLASYKSVPMSFSSPRRR 236


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 814 IIQCDDISSARNKTLTSHHFHVWFCES 734
           II CD +     K+L   +   W+C++
Sbjct: 271 IILCDCVVKEAQKSLVLTYEMRWYCQT 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,656
Number of Sequences: 336
Number of extensions: 3853
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)