Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_B04
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0155 - 17773121-17773576,17773744-17774322 35 0.10
07_03_0820 - 21749477-21749866,21751192-21751590 33 0.23
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 1.6
05_06_0094 + 25477367-25477398,25477516-25477891,25478292-254783... 30 2.2
11_06_0701 + 26407055-26407597,26407794-26409644 30 2.9
05_01_0257 + 1967471-1967695,1968571-1969395 30 2.9
07_01_0907 - 7636725-7637681 29 3.8
03_03_0188 + 15269347-15270213 29 3.8
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329... 29 5.0
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 29 5.0
05_03_0676 - 16853937-16854042,16854605-16854700,16854920-168550... 29 6.6
10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223 28 8.7
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 8.7
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 8.7
01_06_1293 - 36050847-36051304,36052343-36052826 28 8.7
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085... 28 8.7
>03_04_0155 - 17773121-17773576,17773744-17774322
Length = 344
Score = 34.7 bits (76), Expect = 0.10
Identities = 29/84 (34%), Positives = 39/84 (46%)
Frame = -2
Query: 303 RRAKTGRSIRRGPQVRSRIRCGTGGGRSGLMARSSGISENVDEKDRLKAVKGGGW*EHLL 124
RRAK +RRG R+ +GGGR AR G + V + R+ GG LL
Sbjct: 23 RRAKA--VVRRGG---GRVAGTSGGGREA--ARRGGAAAAVRQGGRVLGRSGGEEDRLLL 75
Query: 123 RGEKTSSVLERARRENSGAQAGMA 52
G +T R+ + SGA G+A
Sbjct: 76 HGRRTKGRRHRSGKGRSGAGVGLA 99
>07_03_0820 - 21749477-21749866,21751192-21751590
Length = 262
Score = 33.5 bits (73), Expect = 0.23
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 149 PFTALRRSFSSTFSLIPEERAISPERPPPVPH 244
P ++ S SST SL+P A+ P PPP PH
Sbjct: 23 PLSSPSSSSSSTHSLLPRPPALWPPPPPPPPH 54
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2
Query: 59 PACAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPP 235
P+ PE S AR L S C HQPPP A + S+ P A +P R P
Sbjct: 612 PSPTPEASN-ARGGEMLSSSTSTHCLHQPPPPPASHQFRSAAAFRRPPSPAAAPLRARP 669
>05_06_0094 +
25477367-25477398,25477516-25477891,25478292-25478315,
25479069-25481828
Length = 1063
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/98 (23%), Positives = 37/98 (37%)
Frame = +2
Query: 422 MIARVISSKGNNKPRTVLISGGSSVQALHLARNFHSAGARVVAFEIEGQFALLKYSAAVH 601
M+ + SS G+NK + + + RN HS G + + G+F L S +
Sbjct: 448 MVNSISSSAGSNKS-----TDAQTPNCVSACRNMHSEGYQGLPLNSHGEFVKLHPSGTID 502
Query: 602 KFYSVPRPNPADPLAYARALKAIVEQESVVFYVPVSST 715
R P A A + E+ V Y + S+
Sbjct: 503 PNGMFKRQFPVGDYVRPSAFPAFITPETCVDYAHLKSS 540
>11_06_0701 + 26407055-26407597,26407794-26409644
Length = 797
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 585 YFSSANCPSISKATTLAPAEWKFLAKCKACTELPPL 478
YF P+ T L + LA CK+C LPP+
Sbjct: 624 YFFGCRFPTWLGTTHLPSVKSMILANCKSCVHLPPI 659
>05_01_0257 + 1967471-1967695,1968571-1969395
Length = 349
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 440 SSKGNNKPRTVLISGGSSVQALHLARNFHSAGARVVAFEIEGQFALLKYSAAVHKFYSVP 619
+SKG + V++SG S+ HL+ +FH A A I+ +A +A V + V
Sbjct: 179 ASKGLTQGELVILSGAHSIGVAHLS-SFHDRLAAATATPIDATYA-SALAADVERQKGVQ 236
Query: 620 R-PNPAD 637
R NPA+
Sbjct: 237 RTDNPAE 243
>07_01_0907 - 7636725-7637681
Length = 318
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 519 FLAKCKACTELPPLMRTVRGLLFPF 445
FLA+ A PPLM T G+ +PF
Sbjct: 187 FLARSNAAVHPPPLMSTAAGVSYPF 211
>03_03_0188 + 15269347-15270213
Length = 288
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 110 VFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVP 241
+F P S+ PF L + SS+ + + +A P PPP P
Sbjct: 39 LFLPSSSSSYLDSPFHGLLHTSSSSSATMSPSQAPPPHPPPPAP 82
>09_06_0040 -
20432008-20432091,20432152-20432229,20432322-20432941,
20433042-20433108,20433276-20433291,20433781-20433887,
20433989-20434037,20435059-20435142,20435288-20435384,
20435914-20435985,20436075-20436435,20437864-20438259
Length = 676
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = -2
Query: 300 RAKTGRSIRRGPQVRSRIRCGTGGGRSGLMARSSGISENVDEKDRLKAVKGGGW*EHLLR 121
R + GR RG VR R C TGGG G + L + G E LLR
Sbjct: 25 RCRGGRGRGRGRGVRWR--CATGGGAGGGEVEEGEGEGKREAAAWLSSAVGEKVDELLLR 82
Query: 120 GEKTSSV--LERARRENSGAQAGMAE 49
E + V +E A R A+A +A+
Sbjct: 83 EENRALVEGVEAAERRVERARAALAD 108
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 240 GTGGGRSGLMARSSGISENVDEKDRLKAVKGG 145
GTGG AR+S N+DE+ R++A+ G
Sbjct: 561 GTGGSTMQFPARTSSAPPNLDEQKRMQALPEG 592
>05_03_0676 -
16853937-16854042,16854605-16854700,16854920-16855089,
16856742-16856825,16857042-16857119,16858053-16858216,
16858345-16858429
Length = 260
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 335 ILVVLPTLWIAASLFIFWKCVQCPISV 415
I VVL W+AA L FW C C V
Sbjct: 120 IFVVLCKYWVAAKLDSFWVCPICATRV 146
>10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223
Length = 254
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 65 CAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVPH 244
C+P + A + T + RKR H A+ + S S P +R+ +P PPP P
Sbjct: 178 CSPHAATAAATATATA-ARRKRLRHAH----AMASTSDSDNSTSPAKRSFTPSTPPPPPT 232
Query: 245 L 247
L
Sbjct: 233 L 233
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Frame = +2
Query: 143 PPPFTALRRSFSSTFSLIPEERAISPERP------PPVPHLIRLLTWGPRLMLRPVFALL 304
PPP + S L+P+ + P P PP P +R GPR + P
Sbjct: 87 PPPSSTASSSLPPPTPLLPKHQQAPPPPPPTQSHQPPPPVAVRAPRGGPRRLKVPHILSD 146
Query: 305 SIVSHPA 325
S V+ PA
Sbjct: 147 SSVASPA 153
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 155 TALRRSFSSTFSLIPEERAISPERPPPVPHLIRLLTWGPRLMLRPV 292
TA S SS + P + RPPP PHL R P L +P+
Sbjct: 5 TAASASASSAAASPPSAHLLRLSRPPPFPHLRR--RCAPHLPSKPL 48
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 140 QPPPFTALRRSFSSTFSLIPEERAISPERPPP 235
+PPP L R + F L A+ P PPP
Sbjct: 118 RPPPLPVLHRPLARPFPLAMAPTAMPPPPPPP 149
>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
22709162-22709206,22709367-22709445,22709522-22709595,
22709703-22709809,22711116-22711301,22711882-22711920,
22712020-22712086,22712207-22712281,22713113-22713347,
22713425-22713755,22714530-22714710,22714810-22714950,
22715041-22715302,22715503-22715892,22717179-22717735,
22718421-22718557,22718672-22718853,22718959-22719339,
22719420-22719545,22719635-22719700,22720056-22721839,
22721914-22722193,22722386-22722616,22723067-22723588,
22723683-22723815,22723937-22724193
Length = 2405
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 623 ASALNRTYEQLLSISVAQTVLLFRKPLLSHRPNGNSSPNV 504
A L+ +E +LSIS LL + PL S + N N NV
Sbjct: 1764 AECLSSKHESVLSISFRCLALLIKLPLPSLKDNANLIKNV 1803
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,991,474
Number of Sequences: 37544
Number of extensions: 506136
Number of successful extensions: 1952
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1948
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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