Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B04
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...    29   0.25 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   1.8  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   5.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   9.5  

>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
           protein.
          Length = 77

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 278 MLRPVFALLSIVSHPAWKQILVVLPTLWIAASLFIFWKCVQCPI 409
           +++P   +L  ++ P  ++I      LW A +LFIF  C Q P+
Sbjct: 8   IIKPFCGILPEIAKPE-RKIQFREKVLWTAITLFIFLVCCQIPL 50


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
 Frame = -2

Query: 351  GSTTNICFQAGCETMLRRAKTGRSIRRGPQV---RSRIRCGTGGGRSGLMARSSGISENV 181
            GS +    +AG  +  R     RS  R       RSR R G+GG RS   +RS   S   
Sbjct: 1082 GSGSRAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGS 1141

Query: 180  DEKDRLKAVKGGGW*EHLLRGEKTSSVLERAR 85
             +       + G       RG + S    R+R
Sbjct: 1142 RKSGSRSRSRSG---SQASRGSRRSRSRSRSR 1170


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = +1

Query: 274 SNAAPGLRSPQHCLA------SGLETNISGTTDAVDC 366
           S+  PGL +P  C +      SG+ T  S  + +VDC
Sbjct: 14  SHRPPGLSNPPTCTSAKMMASSGMSTRASARSASVDC 50


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 314 SHPAWKQILVVLPTL 358
           S+PAW   L +LP L
Sbjct: 808 SNPAWSSALAILPAL 822


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,660
Number of Sequences: 2352
Number of extensions: 16923
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)