Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B04
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ...    29   3.4  
AC024791-20|AAO12400.1|  574|Caenorhabditis elegans Hypothetical...    29   3.4  
AC024791-19|AAF60657.2|  618|Caenorhabditis elegans Hypothetical...    29   3.4  
AC024201-6|AAF36016.1|  183|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF063007-2|AAC16433.1|  583|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
           protein Y113G7C.1 protein.
          Length = 1494

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 472 DCPRLVIPLRTNNSSNHLKNTYRALHTFPEYKQRSSN 362
           D PR   P++T    + L+ TYRALH+  +  Q  SN
Sbjct: 363 DGPRRFKPIQTLIELSALRQTYRALHSVAKENQIRSN 399


>AC024791-20|AAO12400.1|  574|Caenorhabditis elegans Hypothetical
           protein Y47G6A.5b protein.
          Length = 574

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 140 QPPPFTALRRSFSSTFSL--IPEERAISPERPPPVPH 244
           +PPP     +S SST     IP  R+ S   PPP+PH
Sbjct: 13  KPPPLRPSTQSVSSTDPRPPIPPRRSESNLVPPPIPH 49


>AC024791-19|AAF60657.2|  618|Caenorhabditis elegans Hypothetical
           protein Y47G6A.5a protein.
          Length = 618

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 140 QPPPFTALRRSFSSTFSL--IPEERAISPERPPPVPH 244
           +PPP     +S SST     IP  R+ S   PPP+PH
Sbjct: 57  KPPPLRPSTQSVSSTDPRPPIPPRRSESNLVPPPIPH 93


>AC024201-6|AAF36016.1|  183|Caenorhabditis elegans Hypothetical
           protein Y71F9B.3 protein.
          Length = 183

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 21/85 (24%), Positives = 39/85 (45%)
 Frame = +2

Query: 290 VFALLSIVSHPAWKQILVVLPTLWIAASLFIFWKCVQCPISVLKMIARVISSKGNNKPRT 469
           +FA+LS+V   +  QI+ V P  W+  S+F+ +  +   +   K+  R +      KP  
Sbjct: 97  IFAILSVVEFFS-VQIVAVFPVYWLFKSIFLLYLYLPSFLGAAKLYHRFV------KPVA 149

Query: 470 VLISGGSSVQALHLARNFHSAGARV 544
              SG    +  + A   +SA  ++
Sbjct: 150 ARHSGSIDAKIGNFADRVNSAAGKL 174


>AF063007-2|AAC16433.1|  583|Caenorhabditis elegans Hypothetical
           protein R119.7 protein.
          Length = 583

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 445 RTNNSSNHLKNTYRALHTFPEYKQRSSNPQRR*Y 344
           +  +  N   ++YR  H+FPEY  R+ NPQ   Y
Sbjct: 98  KVKHQGNSGNSSYRQEHSFPEY--RNQNPQASSY 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,581,620
Number of Sequences: 27780
Number of extensions: 392784
Number of successful extensions: 1275
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)