Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_B03
         (1016 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...    87   5e-16
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    59   2e-07

>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score = 87.4 bits (207), Expect = 5e-16
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = +3

Query: 504 RWXFSGKCARNPYLFIFLNTYKYVSAHETIXLINASIIXKXEESDY 641
           RW FSGKCARNPYLFIFLNT+KYVSAHETI LINASII K EE +Y
Sbjct: 23  RWHFSGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEY 68


>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 58.8 bits (136), Expect = 2e-07
 Identities = 29/45 (64%), Positives = 30/45 (66%)
 Frame = +3

Query: 126 SPAALPEFPFSPRXAEHFPXQALNRGLPLXFRFSAXRHLDPKKLD 260
           +PA    FP        FP QALNRGLPL FRFSA RHLDPKKLD
Sbjct: 29  APAPFAFFPSFLATFAGFPRQALNRGLPLGFRFSALRHLDPKKLD 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,879,439
Number of Sequences: 1657284
Number of extensions: 12029668
Number of successful extensions: 22060
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22054
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 96755564499
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)