Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_B01
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36753-6|CAA85335.1| 103|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF292050-1|AAG41146.1| 103|Caenorhabditis elegans 2I146 protein. 42 4e-04
Z19157-3|CAA79566.3| 395|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81485-11|CAJ21556.1| 449|Caenorhabditis elegans Hypothetical p... 28 10.0
Z81485-9|CAB03981.3| 498|Caenorhabditis elegans Hypothetical pr... 28 10.0
AL022275-4|CAJ21562.1| 449|Caenorhabditis elegans Hypothetical ... 28 10.0
AL022275-2|CAA18361.3| 498|Caenorhabditis elegans Hypothetical ... 28 10.0
AF100307-12|AAC68928.1| 338|Caenorhabditis elegans Hypothetical... 28 10.0
>Z36753-6|CAA85335.1| 103|Caenorhabditis elegans Hypothetical
protein T09A5.7 protein.
Length = 103
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +1
Query: 259 MNSIGEECTDLKKKYDDCFNTWFSERFL----KGDQDDSVCAGIFKIYQECVKNAMKQQ- 423
M+SI EC LK+ YD CF T F ++F+ + + C + +Y+ CV+ + Q
Sbjct: 6 MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYKRCVEERLATQR 64
Query: 424 --SIDFKEIDKDILGTENE 474
ID EI K+ L T+++
Sbjct: 65 PFEIDLDEIRKEYLNTDDD 83
>AF292050-1|AAG41146.1| 103|Caenorhabditis elegans 2I146 protein.
Length = 103
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +1
Query: 259 MNSIGEECTDLKKKYDDCFNTWFSERFL----KGDQDDSVCAGIFKIYQECVKNAMKQQ- 423
M+SI EC LK+ YD CF T F ++F+ + + C + +Y+ CV+ + Q
Sbjct: 6 MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYKRCVEERLATQR 64
Query: 424 --SIDFKEIDKDILGTENE 474
ID EI K+ L T+++
Sbjct: 65 PFEIDLDEIRKEYLNTDDD 83
>Z19157-3|CAA79566.3| 395|Caenorhabditis elegans Hypothetical
protein ZC84.4 protein.
Length = 395
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/95 (25%), Positives = 46/95 (48%)
Frame = -1
Query: 607 IITEILVTAWNLKKLAQGYCNRLWV*RHRPIWVVSYYLHLVVFCIHFQCLRYPYLFL*NQ 428
++T I V W ++ + NR+W+ + I ++SY++HL+ + C+ YP +F
Sbjct: 258 LLTVIYVLCWTPYWVSM-FANRIWIMEKKSIIIISYFIHLLPY---ISCVAYPLIFTLLN 313
Query: 427 CFAVSLHS*HILDKF*IFQRKQNHLDRLLRTFPRT 323
S H+ + D+ F+ + +RT RT
Sbjct: 314 RGIRSAHAKIVADQRRRFRSLTDEASSQIRTAIRT 348
>Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical
protein ZC506.1 protein.
Length = 931
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 554 SLGKFLKIPCSYQDFSDNRLTVKEE 628
S+ K++K+PC + D R VKE+
Sbjct: 407 SINKYVKVPCGFAALKDIRTMVKED 431
>Z81485-11|CAJ21556.1| 449|Caenorhabditis elegans Hypothetical
protein W06B3.2d protein.
Length = 449
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 325 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 480
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 388 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 440
>Z81485-9|CAB03981.3| 498|Caenorhabditis elegans Hypothetical
protein W06B3.2a protein.
Length = 498
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 325 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 480
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 437 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 489
>AL022275-4|CAJ21562.1| 449|Caenorhabditis elegans Hypothetical
protein W06B3.2d protein.
Length = 449
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 325 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 480
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 388 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 440
>AL022275-2|CAA18361.3| 498|Caenorhabditis elegans Hypothetical
protein W06B3.2a protein.
Length = 498
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 325 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 480
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 437 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 489
>AF100307-12|AAC68928.1| 338|Caenorhabditis elegans Hypothetical
protein T12B5.2 protein.
Length = 338
Score = 27.9 bits (59), Expect = 10.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 517 IWVVSYYLHLVVFCIHFQC 461
IWV ++ ++V+C HF+C
Sbjct: 232 IWVSNFDSAIIVYCFHFKC 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,368,037
Number of Sequences: 27780
Number of extensions: 383627
Number of successful extensions: 841
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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